RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 ZSCAN29Q8IWY8 852 aaPredicted RBP19.69■□□□□ 0.74
SSSCA1-202ENST00000526433 ANKRD13AQ8IZ07 590 aa19.69■□□□□ 0.74
SSSCA1-202ENST00000526433 OTUD7AQ8TE49 926 aaPredicted RBP19.69■□□□□ 0.74
SSSCA1-202ENST00000526433 CLMNQ96JQ2 1002 aa19.69■□□□□ 0.74
SSSCA1-202ENST00000526433 MAST2Q6P0Q8 1798 aa19.69■□□□□ 0.74
SSSCA1-202ENST00000526433 RFX7Q2KHR2 1363 aa19.69■□□□□ 0.74
SSSCA1-202ENST00000526433 DCAF15Q66K64 600 aa19.68■□□□□ 0.74
SSSCA1-202ENST00000526433 SH3BP5LQ7L8J4 393 aa19.68■□□□□ 0.74
SSSCA1-202ENST00000526433 SMC5Q8IY18 1101 aa19.68■□□□□ 0.74
SSSCA1-202ENST00000526433 DDTLA6NHG4 134 aaPredicted RBP19.67■□□□□ 0.74
SSSCA1-202ENST00000526433 PDE6AP16499 860 aa19.67■□□□□ 0.74
SSSCA1-202ENST00000526433 B4GALNT3Q6L9W6 998 aa19.67■□□□□ 0.74
SSSCA1-202ENST00000526433 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.67■□□□□ 0.74
SSSCA1-202ENST00000526433 MIGA1Q8NAN2 632 aa19.67■□□□□ 0.74
SSSCA1-202ENST00000526433 ZNF341Q9BYN7 854 aa19.67■□□□□ 0.74
SSSCA1-202ENST00000526433 TTC41PQ6P2S7 1318 aa19.67■□□□□ 0.74
SSSCA1-202ENST00000526433 MKRN3Q13064 507 aaKnown RBP19.66■□□□□ 0.74
SSSCA1-202ENST00000526433 SPRYD7Q5W111 196 aa19.66■□□□□ 0.74
SSSCA1-202ENST00000526433 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.66■□□□□ 0.74
SSSCA1-202ENST00000526433 TGFBRAP1Q8WUH2 860 aa19.66■□□□□ 0.74
SSSCA1-202ENST00000526433 CSRNP1Q96S65 589 aa19.66■□□□□ 0.74
SSSCA1-202ENST00000526433 ZNF532Q9HCE3 1301 aa19.66■□□□□ 0.74
SSSCA1-202ENST00000526433 TCRBV5S4A2TA0A5A2 114 aa19.65■□□□□ 0.74
SSSCA1-202ENST00000526433 ERC2O15083 957 aa19.65■□□□□ 0.74
SSSCA1-202ENST00000526433 AIDAQ96BJ3 306 aa19.65■□□□□ 0.74
SSSCA1-202ENST00000526433 WRNIP1Q96S55 665 aa19.65■□□□□ 0.74
SSSCA1-202ENST00000526433 BEGAINQ9BUH8 593 aa19.65■□□□□ 0.74
SSSCA1-202ENST00000526433 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.65■□□□□ 0.74
SSSCA1-202ENST00000526433 OSBPL5Q9H0X9 879 aaPredicted RBP19.65■□□□□ 0.74
SSSCA1-202ENST00000526433 ELP3Q9H9T3 547 aa19.65■□□□□ 0.74
SSSCA1-202ENST00000526433 THSD7BQ9C0I4 1608 aa19.65■□□□□ 0.74
SSSCA1-202ENST00000526433 MX1P20591 662 aa19.64■□□□□ 0.73
SSSCA1-202ENST00000526433 ADD2P35612 726 aa19.64■□□□□ 0.73
SSSCA1-202ENST00000526433 CERS3Q8IU89 383 aa19.64■□□□□ 0.73
SSSCA1-202ENST00000526433 MAPKAPK5Q8IW41 473 aa19.64■□□□□ 0.73
SSSCA1-202ENST00000526433 REM2Q8IYK8 340 aaPredicted RBP19.64■□□□□ 0.73
SSSCA1-202ENST00000526433 PI4K2BQ8TCG2 481 aa19.64■□□□□ 0.73
SSSCA1-202ENST00000526433 WNK4Q96J92 1243 aa19.64■□□□□ 0.73
SSSCA1-202ENST00000526433 LNPKQ9C0E8 428 aa19.64■□□□□ 0.73
SSSCA1-202ENST00000526433 ZNF112Q9UJU3 913 aa19.64■□□□□ 0.73
SSSCA1-202ENST00000526433 CSADQ9Y600 493 aa19.64■□□□□ 0.73
SSSCA1-202ENST00000526433 SALL3Q9BXA9 1300 aa19.64■□□□□ 0.73
SSSCA1-202ENST00000526433 CDK5RAP2Q96SN8 1893 aa19.63■□□□□ 0.73
SSSCA1-202ENST00000526433 MAGEB6P1A0A0J9YX57 407 aa19.63■□□□□ 0.73
SSSCA1-202ENST00000526433 FOXN1O15353 648 aa19.63■□□□□ 0.73
SSSCA1-202ENST00000526433 GLRX3O76003 335 aaKnown RBP19.63■□□□□ 0.73
SSSCA1-202ENST00000526433 MAP3K10Q02779 954 aa19.63■□□□□ 0.73
SSSCA1-202ENST00000526433 VGLL4Q14135 290 aa19.63■□□□□ 0.73
SSSCA1-202ENST00000526433 SLFNL1Q499Z3 407 aa19.63■□□□□ 0.73
SSSCA1-202ENST00000526433 ZKSCAN4Q969J2 545 aaPredicted RBP19.63■□□□□ 0.73
SSSCA1-202ENST00000526433 RIOK1Q9BRS2 568 aaKnown RBP19.63■□□□□ 0.73
SSSCA1-202ENST00000526433 ATRNL1Q5VV63 1379 aa19.62■□□□□ 0.73
SSSCA1-202ENST00000526433 SLURP2P0DP57 97 aa19.62■□□□□ 0.73
SSSCA1-202ENST00000526433 INPP5BP32019 993 aa19.62■□□□□ 0.73
SSSCA1-202ENST00000526433 ZSCAN25Q6NSZ9 544 aa19.62■□□□□ 0.73
SSSCA1-202ENST00000526433 STAP2Q9UGK3 403 aa19.62■□□□□ 0.73
SSSCA1-202ENST00000526433 OTOFQ9HC10 1997 aa19.61■□□□□ 0.73
SSSCA1-202ENST00000526433 MYH7P12883 1935 aa19.61■□□□□ 0.73
SSSCA1-202ENST00000526433 FLT1P17948 1338 aa19.61■□□□□ 0.73
SSSCA1-202ENST00000526433 CHGBP05060 677 aa19.61■□□□□ 0.73
SSSCA1-202ENST00000526433 ZBTB48P10074 688 aaPredicted RBP19.61■□□□□ 0.73
SSSCA1-202ENST00000526433 GJA5P36382 358 aa19.61■□□□□ 0.73
SSSCA1-202ENST00000526433 USP5P45974 858 aa19.61■□□□□ 0.73
SSSCA1-202ENST00000526433 PDE1AP54750 535 aa19.61■□□□□ 0.73
SSSCA1-202ENST00000526433 NUCB1Q02818 461 aa19.61■□□□□ 0.73
SSSCA1-202ENST00000526433 UBE3CQ15386 1083 aa19.61■□□□□ 0.73
SSSCA1-202ENST00000526433 CHD1LQ86WJ1 897 aa19.61■□□□□ 0.73
SSSCA1-202ENST00000526433 KBTBD3Q8NAB2 608 aa19.61■□□□□ 0.73
SSSCA1-202ENST00000526433 OPTNQ96CV9 577 aa19.61■□□□□ 0.73
SSSCA1-202ENST00000526433 DHX36Q9H2U1 1008 aaKnown RBP19.61■□□□□ 0.73
SSSCA1-202ENST00000526433 PHF20L1A8MW92 1017 aa19.6■□□□□ 0.73
SSSCA1-202ENST00000526433 TBC1D12O60347 775 aa19.6■□□□□ 0.73
SSSCA1-202ENST00000526433 TM4SF4P48230 202 aa19.6■□□□□ 0.73
SSSCA1-202ENST00000526433 CTCFP49711 727 aaPredicted RBP19.6■□□□□ 0.73
SSSCA1-202ENST00000526433 CNKSR2Q8WXI2 1034 aa19.6■□□□□ 0.73
SSSCA1-202ENST00000526433 PI4KBQ9UBF8 816 aa19.6■□□□□ 0.73
SSSCA1-202ENST00000526433 SAP30BPQ9UHR5 308 aaKnown RBP19.6■□□□□ 0.73
SSSCA1-202ENST00000526433 PALD1Q9ULE6 856 aa19.6■□□□□ 0.73
SSSCA1-202ENST00000526433 SNCAIPQ9Y6H5 919 aa19.6■□□□□ 0.73
SSSCA1-202ENST00000526433 FOCADQ5VW36 1801 aa19.6■□□□□ 0.73
SSSCA1-202ENST00000526433 ERO1BQ86YB8 467 aa19.59■□□□□ 0.73
SSSCA1-202ENST00000526433 CRNKL1Q9BZJ0 848 aaKnown RBP19.59■□□□□ 0.73
SSSCA1-202ENST00000526433 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.59■□□□□ 0.73
SSSCA1-202ENST00000526433 COL2A1P02458 1487 aaPredicted RBP19.59■□□□□ 0.73
SSSCA1-202ENST00000526433 MANSC4A6NHS7 340 aaPredicted RBP19.58■□□□□ 0.72
SSSCA1-202ENST00000526433 SPDYE5A6NIY4 337 aa19.58■□□□□ 0.72
SSSCA1-202ENST00000526433 RNF113AO15541 343 aaKnown RBP19.58■□□□□ 0.72
SSSCA1-202ENST00000526433 CA12O43570 354 aa19.58■□□□□ 0.72
SSSCA1-202ENST00000526433 FOXP4Q8IVH2 680 aaPredicted RBP19.58■□□□□ 0.72
SSSCA1-202ENST00000526433 LCORLQ8N3X6 602 aa19.58■□□□□ 0.72
SSSCA1-202ENST00000526433 ARMT1Q9H993 441 aa19.58■□□□□ 0.72
SSSCA1-202ENST00000526433 RNF186Q9NXI6 227 aa19.58■□□□□ 0.72
SSSCA1-202ENST00000526433 MYH1P12882 1939 aa19.58■□□□□ 0.72
SSSCA1-202ENST00000526433 FAM196BA6NMK8 535 aa19.57■□□□□ 0.72
SSSCA1-202ENST00000526433 TRPA1O75762 1119 aa19.57■□□□□ 0.72
SSSCA1-202ENST00000526433 MBD4O95243 580 aa19.57■□□□□ 0.72
SSSCA1-202ENST00000526433 HSPA8P11142 646 aaKnown RBP19.57■□□□□ 0.72
SSSCA1-202ENST00000526433 INHBEP58166 350 aa19.57■□□□□ 0.72
SSSCA1-202ENST00000526433 SREBF2Q12772 1141 aa19.57■□□□□ 0.72
SSSCA1-202ENST00000526433 NOL9Q5SY16 702 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms