RNA–Protein interactions for RNA: ENST00000525902.5

CTNND1-212, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,984 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-212ENST00000525902 TNNC1P63316 161 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 TEFQ10587 303 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 TNIP1Q15025 636 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 VPS53Q5VIR6 699 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 PRPF40BQ6NWY9 871 aaKnown RBP7.32□□□□□ -1.24
CTNND1-212ENST00000525902 CCDC62Q6P9F0 684 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 VPS36Q86VN1 386 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 CNGA4Q8IV77 575 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 ZBTB10Q96DT7 871 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 SH3GL2Q99962 352 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 ADAM21Q9UKJ8 722 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 ERBB4Q15303 1308 aa7.31□□□□□ -1.24
CTNND1-212ENST00000525902 ECE1P42892 770 aa7.31□□□□□ -1.24
CTNND1-212ENST00000525902 ZFYVE27Q5T4F4 411 aa7.31□□□□□ -1.24
CTNND1-212ENST00000525902 IFT20Q8IY31 132 aa7.31□□□□□ -1.24
CTNND1-212ENST00000525902 VPS52Q8N1B4 723 aa7.31□□□□□ -1.24
CTNND1-212ENST00000525902 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.31□□□□□ -1.24
CTNND1-212ENST00000525902 HOOK2Q96ED9 719 aa7.31□□□□□ -1.24
CTNND1-212ENST00000525902 C8orf76Q96K31 380 aa7.31□□□□□ -1.24
CTNND1-212ENST00000525902 SPZ1Q9BXG8 430 aa7.31□□□□□ -1.24
CTNND1-212ENST00000525902 PDE11AQ9HCR9 933 aa7.31□□□□□ -1.24
CTNND1-212ENST00000525902 KIF24Q5T7B8 1368 aa7.31□□□□□ -1.24
CTNND1-212ENST00000525902 TXNDC9O14530 226 aa7.31□□□□□ -1.24
CTNND1-212ENST00000525902 RNF40O75150 1001 aa7.31□□□□□ -1.24
CTNND1-212ENST00000525902 TSPAN9O75954 239 aa7.31□□□□□ -1.24
CTNND1-212ENST00000525902 SLC4A2P04920 1241 aa7.31□□□□□ -1.24
CTNND1-212ENST00000525902 CYLC2Q14093 348 aaPredicted RBP7.31□□□□□ -1.24
CTNND1-212ENST00000525902 PROCA1Q8NCQ7 364 aaPredicted RBP7.31□□□□□ -1.24
CTNND1-212ENST00000525902 EVI5LQ96CN4 794 aa7.31□□□□□ -1.24
CTNND1-212ENST00000525902 GPR101Q96P66 508 aaPredicted RBP7.31□□□□□ -1.24
CTNND1-212ENST00000525902 LARP6Q9BRS8 491 aaKnown RBP7.31□□□□□ -1.24
CTNND1-212ENST00000525902 KIF9Q9HAQ2 790 aa7.31□□□□□ -1.24
CTNND1-212ENST00000525902 MRPS35P82673 323 aaKnown RBP7.31□□□□□ -1.24
CTNND1-212ENST00000525902 TUBA3CQ13748 450 aa7.31□□□□□ -1.24
CTNND1-212ENST00000525902 KIAA0825Q8IV33 1275 aa7.31□□□□□ -1.24
CTNND1-212ENST00000525902 AMOTL1Q8IY63 956 aa7.31□□□□□ -1.24
CTNND1-212ENST00000525902 ANKRD44Q8N8A2 993 aa7.31□□□□□ -1.24
CTNND1-212ENST00000525902 CBX8Q9HC52 389 aa7.31□□□□□ -1.24
CTNND1-212ENST00000525902 DIABLOQ9NR28 239 aa7.31□□□□□ -1.24
CTNND1-212ENST00000525902 ZBTB40Q9NUA8 1239 aa7.31□□□□□ -1.24
CTNND1-212ENST00000525902 AOX1Q06278 1338 aa7.31□□□□□ -1.24
CTNND1-212ENST00000525902 PAPOLAP51003 745 aaKnown RBP7.31□□□□□ -1.24
CTNND1-212ENST00000525902 CORO7P57737 925 aa7.31□□□□□ -1.24
CTNND1-212ENST00000525902 DNM1Q05193 864 aaKnown RBP7.31□□□□□ -1.24
CTNND1-212ENST00000525902 CCDC197Q8NCU1 140 aa7.31□□□□□ -1.24
CTNND1-212ENST00000525902 DCTPP1Q9H773 170 aa7.31□□□□□ -1.24
CTNND1-212ENST00000525902 ABCF2Q9UG63 623 aa7.31□□□□□ -1.24
CTNND1-212ENST00000525902 GOLGA8AA7E2F4 631 aa7.3□□□□□ -1.24
CTNND1-212ENST00000525902 GOLGA8BA8MQT2 603 aa7.3□□□□□ -1.24
CTNND1-212ENST00000525902 PRC1O43663 620 aa7.3□□□□□ -1.24
CTNND1-212ENST00000525902 ARPC4P59998 168 aa7.3□□□□□ -1.24
CTNND1-212ENST00000525902 KIAA2013Q8IYS2 634 aa7.3□□□□□ -1.24
CTNND1-212ENST00000525902 ARL10Q8N8L6 244 aa7.3□□□□□ -1.24
CTNND1-212ENST00000525902 THUMPD2Q9BTF0 503 aaKnown RBP7.3□□□□□ -1.24
CTNND1-212ENST00000525902 STK38LQ9Y2H1 464 aa7.3□□□□□ -1.24
CTNND1-212ENST00000525902 MAGI1Q96QZ7 1491 aaPredicted RBP7.3□□□□□ -1.24
CTNND1-212ENST00000525902 KDM5DQ9BY66 1539 aa7.3□□□□□ -1.24
CTNND1-212ENST00000525902 SNAPC4Q5SXM2 1469 aa7.3□□□□□ -1.24
CTNND1-212ENST00000525902 ZWINTO95229 277 aa7.3□□□□□ -1.24
CTNND1-212ENST00000525902 ESRRBO95718 433 aa7.3□□□□□ -1.24
CTNND1-212ENST00000525902 PARP1P09874 1014 aaKnown RBP7.3□□□□□ -1.24
CTNND1-212ENST00000525902 CCDC159P0C7I6 412 aa7.3□□□□□ -1.24
CTNND1-212ENST00000525902 NCBP1Q09161 790 aaKnown RBP7.3□□□□□ -1.24
CTNND1-212ENST00000525902 IFT88Q13099 833 aa7.3□□□□□ -1.24
CTNND1-212ENST00000525902 PAK2Q13177 524 aa7.3□□□□□ -1.24
CTNND1-212ENST00000525902 ZNF569Q5MCW4 686 aa7.3□□□□□ -1.24
CTNND1-212ENST00000525902 SWT1Q5T5J6 900 aaKnown RBP7.3□□□□□ -1.24
CTNND1-212ENST00000525902 SYCP3Q8IZU3 236 aa7.3□□□□□ -1.24
CTNND1-212ENST00000525902 RMND1Q9NWS8 449 aa7.3□□□□□ -1.24
CTNND1-212ENST00000525902 KLHL14Q9P2G3 628 aa7.3□□□□□ -1.24
CTNND1-212ENST00000525902 RTL1A6NKG5 1358 aa7.3□□□□□ -1.24
CTNND1-212ENST00000525902 MAP3K7O43318 606 aa7.3□□□□□ -1.24
CTNND1-212ENST00000525902 BMP15O95972 392 aa7.3□□□□□ -1.24
CTNND1-212ENST00000525902 HPDP32754 393 aaPredicted RBP7.3□□□□□ -1.24
CTNND1-212ENST00000525902 ETF1P62495 437 aaKnown RBP7.3□□□□□ -1.24
CTNND1-212ENST00000525902 ATP2B2Q01814 1243 aa7.3□□□□□ -1.24
CTNND1-212ENST00000525902 DMPKQ09013 629 aa7.3□□□□□ -1.24
CTNND1-212ENST00000525902 FLOT2Q14254 428 aa7.3□□□□□ -1.24
CTNND1-212ENST00000525902 ZGPATQ8N5A5 531 aaKnown RBP7.3□□□□□ -1.24
CTNND1-212ENST00000525902 CEP70Q8NHQ1 597 aa7.3□□□□□ -1.24
CTNND1-212ENST00000525902 MOV10L1Q9BXT6 1211 aaKnown RBP7.3□□□□□ -1.24
CTNND1-212ENST00000525902 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.3□□□□□ -1.241e-7■■■□□ 16.3
CTNND1-212ENST00000525902 C1orf141Q5JVX7 400 aa7.3□□□□□ -1.24
CTNND1-212ENST00000525902 PALM2Q8IXS6 379 aa7.3□□□□□ -1.24
CTNND1-212ENST00000525902 ANKRD7Q92527 254 aa7.3□□□□□ -1.24
CTNND1-212ENST00000525902 CFAP73A6NFT4 308 aa7.29□□□□□ -1.24
CTNND1-212ENST00000525902 SLFN14P0C7P3 912 aa7.29□□□□□ -1.24
CTNND1-212ENST00000525902 LONP1P36776 959 aaKnown RBP7.29□□□□□ -1.24
CTNND1-212ENST00000525902 MATR3P43243 847 aaKnown RBP eCLIP7.29□□□□□ -1.246e-7■■■■□ 22.1
CTNND1-212ENST00000525902 PDE1BQ01064 536 aa7.29□□□□□ -1.24
CTNND1-212ENST00000525902 LONRF2Q1L5Z9 754 aa7.29□□□□□ -1.24
CTNND1-212ENST00000525902 RCSD1Q6JBY9 416 aa7.29□□□□□ -1.24
CTNND1-212ENST00000525902 HOMER2Q9NSB8 354 aa7.29□□□□□ -1.24
CTNND1-212ENST00000525902 MTRF1LQ9UGC7 380 aaKnown RBP7.29□□□□□ -1.24
CTNND1-212ENST00000525902 HARSP12081 509 aaKnown RBP7.29□□□□□ -1.24
CTNND1-212ENST00000525902 TUBA1BP68363 451 aa7.29□□□□□ -1.24
CTNND1-212ENST00000525902 MYL5Q02045 173 aa7.29□□□□□ -1.24
CTNND1-212ENST00000525902 EP400NLQ6ZTU2 488 aa7.29□□□□□ -1.24
CTNND1-212ENST00000525902 TUBA1AQ71U36 451 aa7.29□□□□□ -1.24
CTNND1-212ENST00000525902 LRRC8AQ8IWT6 810 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms