RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 CDC5LQ99459 802 aaKnown RBP12.84□□□□□ -0.35
CLNS1A-204ENST00000525428 FAM107BQ9H098 131 aa12.84□□□□□ -0.35
CLNS1A-204ENST00000525428 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.84□□□□□ -0.35
CLNS1A-204ENST00000525428 RGPD2P0DJD1 1756 aa12.83□□□□□ -0.35
CLNS1A-204ENST00000525428 STX10O60499 249 aa12.83□□□□□ -0.36
CLNS1A-204ENST00000525428 CCDC175P0C221 793 aa12.83□□□□□ -0.36
CLNS1A-204ENST00000525428 TAF7Q15545 349 aaPredicted RBP12.83□□□□□ -0.36
CLNS1A-204ENST00000525428 NCAPH2Q6IBW4 605 aa12.83□□□□□ -0.36
CLNS1A-204ENST00000525428 GSPT2Q8IYD1 628 aaKnown RBP12.83□□□□□ -0.36
CLNS1A-204ENST00000525428 MSANTD4Q8NCY6 345 aa12.83□□□□□ -0.36
CLNS1A-204ENST00000525428 SLIT3O75094 1523 aa12.83□□□□□ -0.36
CLNS1A-204ENST00000525428 ALS2Q96Q42 1657 aa12.83□□□□□ -0.36
CLNS1A-204ENST00000525428 POTEB2H3BUK9 544 aa12.83□□□□□ -0.36
CLNS1A-204ENST00000525428 CTDNEP1O95476 244 aa12.83□□□□□ -0.36
CLNS1A-204ENST00000525428 ABL1P00519 1130 aa12.83□□□□□ -0.36
CLNS1A-204ENST00000525428 PAX7P23759 505 aa12.83□□□□□ -0.36
CLNS1A-204ENST00000525428 RDXP35241 583 aaKnown RBP12.83□□□□□ -0.36
CLNS1A-204ENST00000525428 POLD4Q9HCU8 107 aa12.83□□□□□ -0.36
CLNS1A-204ENST00000525428 TLR7Q9NYK1 1049 aaKnown RBP12.83□□□□□ -0.36
CLNS1A-204ENST00000525428 GGCXP38435 758 aa12.82□□□□□ -0.36
CLNS1A-204ENST00000525428 KIRREL3Q8IZU9 778 aa12.82□□□□□ -0.36
CLNS1A-204ENST00000525428 SGSM3Q96HU1 749 aa12.82□□□□□ -0.36
CLNS1A-204ENST00000525428 RGPD5Q99666 1765 aa12.82□□□□□ -0.36
CLNS1A-204ENST00000525428 NEDD4P46934 1319 aa12.82□□□□□ -0.36
CLNS1A-204ENST00000525428 ANXA1P04083 346 aa12.82□□□□□ -0.36
CLNS1A-204ENST00000525428 PFKFB1P16118 471 aa12.82□□□□□ -0.36
CLNS1A-204ENST00000525428 IRAK1P51617 712 aa12.82□□□□□ -0.36
CLNS1A-204ENST00000525428 NAA16Q6N069 864 aaPredicted RBP12.82□□□□□ -0.36
CLNS1A-204ENST00000525428 SLC35F6Q8N357 371 aa12.82□□□□□ -0.36
CLNS1A-204ENST00000525428 LINC00301Q8NCQ3 95 aa12.82□□□□□ -0.36
CLNS1A-204ENST00000525428 GNL3LQ9NVN8 582 aaKnown RBP12.82□□□□□ -0.36
CLNS1A-204ENST00000525428 MAP3K5Q99683 1374 aa12.82□□□□□ -0.36
CLNS1A-204ENST00000525428 CTAGE9A4FU28 777 aa12.81□□□□□ -0.36
CLNS1A-204ENST00000525428 IKBKBO14920 756 aa12.81□□□□□ -0.36
CLNS1A-204ENST00000525428 SPTLC2O15270 562 aa12.81□□□□□ -0.36
CLNS1A-204ENST00000525428 BIRC2Q13490 618 aa12.81□□□□□ -0.36
CLNS1A-204ENST00000525428 HSP90AB3PQ58FF7 597 aa12.81□□□□□ -0.36
CLNS1A-204ENST00000525428 NAIF1Q69YI7 327 aaPredicted RBP12.81□□□□□ -0.36
CLNS1A-204ENST00000525428 TRMT44Q8IYL2 757 aaKnown RBP12.81□□□□□ -0.36
CLNS1A-204ENST00000525428 CTCFLQ8NI51 663 aaPredicted RBP12.81□□□□□ -0.36
CLNS1A-204ENST00000525428 GBP3Q9H0R5 595 aa12.81□□□□□ -0.36
CLNS1A-204ENST00000525428 ACTN3Q08043 901 aaPredicted RBP12.81□□□□□ -0.36
CLNS1A-204ENST00000525428 LONRF3Q496Y0 759 aa12.81□□□□□ -0.36
CLNS1A-204ENST00000525428 C1orf141Q5JVX7 400 aa12.81□□□□□ -0.36
CLNS1A-204ENST00000525428 RAB11FIP4Q86YS3 637 aa12.81□□□□□ -0.36
CLNS1A-204ENST00000525428 CCDC9Q9Y3X0 531 aaKnown RBP12.81□□□□□ -0.36
CLNS1A-204ENST00000525428 PRPF6O94906 941 aaKnown RBP12.81□□□□□ -0.36
CLNS1A-204ENST00000525428 PDE6BP35913 854 aa12.81□□□□□ -0.36
CLNS1A-204ENST00000525428 TEFQ10587 303 aa12.81□□□□□ -0.36
CLNS1A-204ENST00000525428 HSP90AB4PQ58FF6 505 aa12.81□□□□□ -0.36
CLNS1A-204ENST00000525428 SPECC1LQ69YQ0 1117 aa12.81□□□□□ -0.36
CLNS1A-204ENST00000525428 OLFM4Q6UX06 510 aa12.81□□□□□ -0.36
CLNS1A-204ENST00000525428 FAM76AQ8TAV0 307 aa12.81□□□□□ -0.36
CLNS1A-204ENST00000525428 CABS1Q96KC9 395 aa12.81□□□□□ -0.36
CLNS1A-204ENST00000525428 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.81□□□□□ -0.36
CLNS1A-204ENST00000525428 CDHR2Q9BYE9 1310 aa12.81□□□□□ -0.36
CLNS1A-204ENST00000525428 SHTN1A0MZ66 631 aa12.8□□□□□ -0.36
CLNS1A-204ENST00000525428 GOLGA6CA6NDK9 693 aa12.8□□□□□ -0.36
CLNS1A-204ENST00000525428 A1BGP04217 495 aa12.8□□□□□ -0.36
CLNS1A-204ENST00000525428 GOLGA6DP0CG33 693 aa12.8□□□□□ -0.36
CLNS1A-204ENST00000525428 NF2P35240 595 aa12.8□□□□□ -0.36
CLNS1A-204ENST00000525428 PPARDQ03181 441 aa12.8□□□□□ -0.36
CLNS1A-204ENST00000525428 SLC39A6Q13433 755 aa12.8□□□□□ -0.36
CLNS1A-204ENST00000525428 TMED8Q6PL24 325 aaPredicted RBP12.8□□□□□ -0.36
CLNS1A-204ENST00000525428 SAMD1Q6SPF0 538 aaPredicted RBP12.8□□□□□ -0.36
CLNS1A-204ENST00000525428 RAD9BQ6WBX8 426 aa12.8□□□□□ -0.36
CLNS1A-204ENST00000525428 CEP57Q86XR8 500 aa12.8□□□□□ -0.36
CLNS1A-204ENST00000525428 GOLGA6AQ9NYA3 693 aa12.8□□□□□ -0.36
CLNS1A-204ENST00000525428 CRB1P82279 1406 aa12.8□□□□□ -0.36
CLNS1A-204ENST00000525428 CAMTA1Q9Y6Y1 1673 aa12.8□□□□□ -0.36
CLNS1A-204ENST00000525428 TATP17735 454 aaPredicted RBP12.8□□□□□ -0.36
CLNS1A-204ENST00000525428 CDC27P30260 824 aa12.8□□□□□ -0.36
CLNS1A-204ENST00000525428 ELF1P32519 619 aa12.8□□□□□ -0.36
CLNS1A-204ENST00000525428 PDE4BQ07343 736 aa12.8□□□□□ -0.36
CLNS1A-204ENST00000525428 STIM1Q13586 685 aa12.8□□□□□ -0.36
CLNS1A-204ENST00000525428 HDGFL1Q5TGJ6 251 aa12.8□□□□□ -0.36
CLNS1A-204ENST00000525428 STK11IPQ8N1F8 1099 aa12.8□□□□□ -0.36
CLNS1A-204ENST00000525428 SMARCC2Q8TAQ2 1214 aa12.8□□□□□ -0.36
CLNS1A-204ENST00000525428 MIEF2Q96C03 454 aa12.8□□□□□ -0.36
CLNS1A-204ENST00000525428 CRACR2AQ9BSW2 395 aa12.8□□□□□ -0.36
CLNS1A-204ENST00000525428 ROBO1Q9Y6N7 1651 aa12.79□□□□□ -0.36
CLNS1A-204ENST00000525428 RGPD1P0DJD0 1748 aa12.79□□□□□ -0.36
CLNS1A-204ENST00000525428 TAF5LO75529 589 aa12.79□□□□□ -0.36
CLNS1A-204ENST00000525428 GPTP24298 496 aa12.79□□□□□ -0.36
CLNS1A-204ENST00000525428 GNGT1P63211 74 aa12.79□□□□□ -0.36
CLNS1A-204ENST00000525428 FAM43BQ6ZT52 329 aaPredicted RBP12.79□□□□□ -0.36
CLNS1A-204ENST00000525428 PI4KAP2A4QPH2 592 aa12.79□□□□□ -0.36
CLNS1A-204ENST00000525428 CYP27B1O15528 508 aa12.79□□□□□ -0.36
CLNS1A-204ENST00000525428 CYP21A2P08686 494 aa12.79□□□□□ -0.36
CLNS1A-204ENST00000525428 SYKP43405 635 aa12.79□□□□□ -0.36
CLNS1A-204ENST00000525428 NEDD9Q14511 834 aa12.79□□□□□ -0.36
CLNS1A-204ENST00000525428 ZNF827Q17R98 1081 aa12.79□□□□□ -0.36
CLNS1A-204ENST00000525428 FKBP15Q5T1M5 1219 aa12.79□□□□□ -0.36
CLNS1A-204ENST00000525428 SYNE3Q6ZMZ3 975 aa12.79□□□□□ -0.36
CLNS1A-204ENST00000525428 OTUD6BQ8N6M0 293 aa12.79□□□□□ -0.36
CLNS1A-204ENST00000525428 PI4KAP1Q8N8J0 262 aa12.79□□□□□ -0.36
CLNS1A-204ENST00000525428 ZKSCAN4Q969J2 545 aaPredicted RBP12.79□□□□□ -0.36
CLNS1A-204ENST00000525428 EAF2Q96CJ1 260 aaPredicted RBP12.79□□□□□ -0.36
CLNS1A-204ENST00000525428 RTEL1Q9NZ71 1219 aa12.79□□□□□ -0.36
CLNS1A-204ENST00000525428 HPCAL4Q9UM19 191 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms