RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 CXCL11O14625 94 aa11.9□□□□□ -0.5
TRAPPC4-206ENST00000525303 SEMA3EO15041 775 aa11.9□□□□□ -0.5
TRAPPC4-206ENST00000525303 BCRP11274 1271 aa11.9□□□□□ -0.5
TRAPPC4-206ENST00000525303 CCL5P13501 91 aa11.9□□□□□ -0.5
TRAPPC4-206ENST00000525303 RGS3P49796 1198 aa11.9□□□□□ -0.5
TRAPPC4-206ENST00000525303 PRKCZQ05513 592 aa11.9□□□□□ -0.5
TRAPPC4-206ENST00000525303 SLFN5Q08AF3 891 aa11.9□□□□□ -0.5
TRAPPC4-206ENST00000525303 ALDH1L2Q3SY69 923 aa11.9□□□□□ -0.5
TRAPPC4-206ENST00000525303 DPF3Q92784 378 aa11.9□□□□□ -0.5
TRAPPC4-206ENST00000525303 BIN2Q9UBW5 565 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC4-206ENST00000525303 DENND2AQ9ULE3 1009 aa11.9□□□□□ -0.5
TRAPPC4-206ENST00000525303 A0A0G2JLL6 359 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC4-206ENST00000525303 PHF20L1A8MW92 1017 aa11.89□□□□□ -0.51
TRAPPC4-206ENST00000525303 GJB1P08034 283 aa11.89□□□□□ -0.51
TRAPPC4-206ENST00000525303 ADORA1P30542 326 aa11.89□□□□□ -0.51
TRAPPC4-206ENST00000525303 IL15P40933 162 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC4-206ENST00000525303 GJA8P48165 433 aa11.89□□□□□ -0.51
TRAPPC4-206ENST00000525303 FCGRTP55899 365 aa11.89□□□□□ -0.51
TRAPPC4-206ENST00000525303 CHRDL2Q6WN34 429 aa11.89□□□□□ -0.51
TRAPPC4-206ENST00000525303 PRRT2Q7Z6L0 340 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC4-206ENST00000525303 ZSCAN29Q8IWY8 852 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC4-206ENST00000525303 SCYL3Q8IZE3 742 aa11.89□□□□□ -0.51
TRAPPC4-206ENST00000525303 ZGPATQ8N5A5 531 aaKnown RBP11.89□□□□□ -0.51
TRAPPC4-206ENST00000525303 NKX2-3Q8TAU0 364 aa11.89□□□□□ -0.51
TRAPPC4-206ENST00000525303 IDI2Q9BXS1 227 aa11.89□□□□□ -0.51
TRAPPC4-206ENST00000525303 RNF208Q9H0X6 261 aa11.89□□□□□ -0.51
TRAPPC4-206ENST00000525303 PICK1Q9NRD5 415 aa11.89□□□□□ -0.51
TRAPPC4-206ENST00000525303 PA2G4Q9UQ80 394 aaKnown RBP11.89□□□□□ -0.51
TRAPPC4-206ENST00000525303 LRRFIP2Q9Y608 721 aaKnown RBP11.89□□□□□ -0.51
TRAPPC4-206ENST00000525303 ZHX2Q9Y6X8 837 aa11.89□□□□□ -0.51
TRAPPC4-206ENST00000525303 RFX7Q2KHR2 1363 aa11.89□□□□□ -0.51
TRAPPC4-206ENST00000525303 PLXNB2O15031 1838 aa11.88□□□□□ -0.51
TRAPPC4-206ENST00000525303 SIPA1L1O43166 1804 aa11.88□□□□□ -0.51
TRAPPC4-206ENST00000525303 ENTPD3O75355 529 aa11.88□□□□□ -0.51
TRAPPC4-206ENST00000525303 SLURP2P0DP57 97 aa11.88□□□□□ -0.51
TRAPPC4-206ENST00000525303 PTPRAP18433 802 aa11.88□□□□□ -0.51
TRAPPC4-206ENST00000525303 UBXN2AP68543 259 aa11.88□□□□□ -0.51
TRAPPC4-206ENST00000525303 CCDC102BQ68D86 513 aa11.88□□□□□ -0.51
TRAPPC4-206ENST00000525303 GADL1Q6ZQY3 521 aa11.88□□□□□ -0.51
TRAPPC4-206ENST00000525303 SH3BP5LQ7L8J4 393 aa11.88□□□□□ -0.51
TRAPPC4-206ENST00000525303 FASTKD5Q7L8L6 764 aaKnown RBP11.88□□□□□ -0.51
TRAPPC4-206ENST00000525303 DZIP1Q86YF9 867 aaKnown RBP11.88□□□□□ -0.51
TRAPPC4-206ENST00000525303 CDCA7LQ96GN5 454 aa11.88□□□□□ -0.51
TRAPPC4-206ENST00000525303 ABCF2Q9UG63 623 aa11.88□□□□□ -0.51
TRAPPC4-206ENST00000525303 GABRQQ9UN88 632 aa11.88□□□□□ -0.51
TRAPPC4-206ENST00000525303 AFG3L2Q9Y4W6 797 aa11.88□□□□□ -0.51
TRAPPC4-206ENST00000525303 GAKO14976 1311 aa11.87□□□□□ -0.51
TRAPPC4-206ENST00000525303 DDTLA6NHG4 134 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC4-206ENST00000525303 PICALMQ13492 652 aa11.87□□□□□ -0.51
TRAPPC4-206ENST00000525303 RASGRF1Q13972 1273 aa11.87□□□□□ -0.51
TRAPPC4-206ENST00000525303 SLAIN1Q8ND83 568 aa11.87□□□□□ -0.51
TRAPPC4-206ENST00000525303 COPRSQ9NQ92 184 aa11.87□□□□□ -0.51
TRAPPC4-206ENST00000525303 DDX4Q9NQI0 724 aaKnown RBP11.87□□□□□ -0.51
TRAPPC4-206ENST00000525303 NOB1Q9ULX3 412 aaKnown RBP11.87□□□□□ -0.51
TRAPPC4-206ENST00000525303 LAMA3Q16787 3333 aa11.87□□□□□ -0.51
TRAPPC4-206ENST00000525303 MAST2Q6P0Q8 1798 aa11.87□□□□□ -0.51
TRAPPC4-206ENST00000525303 MYH1P12882 1939 aa11.86□□□□□ -0.51
TRAPPC4-206ENST00000525303 ZBTB22O15209 634 aa11.86□□□□□ -0.51
TRAPPC4-206ENST00000525303 CT47B1P0C2W7 299 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC4-206ENST00000525303 BTDP43251 543 aa11.86□□□□□ -0.51
TRAPPC4-206ENST00000525303 TIMM10P62072 90 aa11.86□□□□□ -0.51
TRAPPC4-206ENST00000525303 MAP3K10Q02779 954 aa11.86□□□□□ -0.51
TRAPPC4-206ENST00000525303 UBE2Q1Q7Z7E8 422 aa11.86□□□□□ -0.51
TRAPPC4-206ENST00000525303 SLF2Q8IX21 1173 aa11.86□□□□□ -0.51
TRAPPC4-206ENST00000525303 SMCR8Q8TEV9 937 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC4-206ENST00000525303 U2AF1L4Q8WU68 220 aaKnown RBP11.86□□□□□ -0.51
TRAPPC4-206ENST00000525303 HTATIP2Q9BUP3 242 aa11.86□□□□□ -0.51
TRAPPC4-206ENST00000525303 UNC93B1Q9H1C4 597 aa11.86□□□□□ -0.51
TRAPPC4-206ENST00000525303 RBM27Q9P2N5 1060 aaKnown RBP11.86□□□□□ -0.51
TRAPPC4-206ENST00000525303 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC4-206ENST00000525303 SLC45A1Q9Y2W3 748 aa11.86□□□□□ -0.51
TRAPPC4-206ENST00000525303 MROH7-TTC4A0A0A0MT08 1334 aa11.86□□□□□ -0.51
TRAPPC4-206ENST00000525303 TRIM75PA6NK02 468 aa11.85□□□□□ -0.51
TRAPPC4-206ENST00000525303 TNPO2O14787 897 aaKnown RBP11.85□□□□□ -0.51
TRAPPC4-206ENST00000525303 ADCY3O60266 1144 aa11.85□□□□□ -0.51
TRAPPC4-206ENST00000525303 CTNND1O60716 968 aaKnown RBP11.85□□□□□ -0.51
TRAPPC4-206ENST00000525303 ELNP15502 786 aa11.85□□□□□ -0.51
TRAPPC4-206ENST00000525303 FLT3LGP49771 235 aa11.85□□□□□ -0.51
TRAPPC4-206ENST00000525303 SPTY2D1Q68D10 685 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC4-206ENST00000525303 CCDC84Q86UT8 332 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC4-206ENST00000525303 TRMT2AQ8IZ69 625 aaKnown RBP11.85□□□□□ -0.51
TRAPPC4-206ENST00000525303 FAM163AQ96GL9 167 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC4-206ENST00000525303 MEIS3Q99687 375 aa11.85□□□□□ -0.51
TRAPPC4-206ENST00000525303 HDAC5Q9UQL6 1122 aa11.85□□□□□ -0.51
TRAPPC4-206ENST00000525303 DDX60LQ5H9U9 1706 aaKnown RBP11.85□□□□□ -0.51
TRAPPC4-206ENST00000525303 PDS5AQ29RF7 1337 aaKnown RBP11.85□□□□□ -0.51
TRAPPC4-206ENST00000525303 A0A1B0GUL7 405 aa11.84□□□□□ -0.51
TRAPPC4-206ENST00000525303 FAM196BA6NMK8 535 aa11.84□□□□□ -0.51
TRAPPC4-206ENST00000525303 FARP2O94887 1054 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC4-206ENST00000525303 SGPL1O95470 568 aa11.84□□□□□ -0.51
TRAPPC4-206ENST00000525303 INHAP05111 366 aa11.84□□□□□ -0.51
TRAPPC4-206ENST00000525303 MECOMQ03112 1051 aa11.84□□□□□ -0.51
TRAPPC4-206ENST00000525303 XAGE2Q96GT9 111 aa11.84□□□□□ -0.51
TRAPPC4-206ENST00000525303 API5Q9BZZ5 524 aaKnown RBP11.84□□□□□ -0.51
TRAPPC4-206ENST00000525303 FRMPD3Q5JV73 1810 aa11.83□□□□□ -0.51
TRAPPC4-206ENST00000525303 COL6A3P12111 3177 aa11.83□□□□□ -0.51
TRAPPC4-206ENST00000525303 GPR75-ASB3A0A0A6YYF3 556 aa11.83□□□□□ -0.52
TRAPPC4-206ENST00000525303 SRGAP3O43295 1099 aa11.83□□□□□ -0.52
TRAPPC4-206ENST00000525303 RHBDL3P58872 404 aa11.83□□□□□ -0.52
TRAPPC4-206ENST00000525303 TFCP2Q12800 502 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms