RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 GJA3Q9Y6H8 435 aa6.96□□□□□ -1.3
USP47-204ENST00000525078 E2F8A0AVK6 867 aa6.95□□□□□ -1.3
USP47-204ENST00000525078 EGFRP00533 1210 aa6.95□□□□□ -1.3
USP47-204ENST00000525078 L1CAMP32004 1257 aa6.95□□□□□ -1.3
USP47-204ENST00000525078 PIN1Q13526 163 aaPredicted RBP6.95□□□□□ -1.3
USP47-204ENST00000525078 ZBTB46Q86UZ6 589 aa6.95□□□□□ -1.3
USP47-204ENST00000525078 TMTC2Q8N394 836 aa6.95□□□□□ -1.3
USP47-204ENST00000525078 LEO1Q8WVC0 666 aaPredicted RBP6.95□□□□□ -1.3
USP47-204ENST00000525078 CDC6Q99741 560 aa6.95□□□□□ -1.3
USP47-204ENST00000525078 ZKSCAN3Q9BRR0 538 aa6.95□□□□□ -1.3
USP47-204ENST00000525078 TARS2Q9BW92 718 aaKnown RBP6.95□□□□□ -1.3
USP47-204ENST00000525078 CILPO75339 1184 aa6.94□□□□□ -1.3
USP47-204ENST00000525078 SASH3O75995 380 aa6.94□□□□□ -1.3
USP47-204ENST00000525078 KIF4AO95239 1232 aa6.94□□□□□ -1.3
USP47-204ENST00000525078 IFIT2P09913 472 aaKnown RBP6.94□□□□□ -1.3
USP47-204ENST00000525078 CCNFP41002 786 aa6.94□□□□□ -1.3
USP47-204ENST00000525078 GRIA4P48058 902 aa6.94□□□□□ -1.3
USP47-204ENST00000525078 STRN3Q13033 797 aa6.94□□□□□ -1.3
USP47-204ENST00000525078 MTMR1Q13613 665 aa6.94□□□□□ -1.3
USP47-204ENST00000525078 NCAPHQ15003 741 aa6.94□□□□□ -1.3
USP47-204ENST00000525078 GFOD2Q3B7J2 385 aa6.94□□□□□ -1.3
USP47-204ENST00000525078 VHLLQ6RSH7 139 aa6.94□□□□□ -1.3
USP47-204ENST00000525078 NECAB2Q7Z6G3 386 aa6.94□□□□□ -1.3
USP47-204ENST00000525078 NLRP8Q86W28 1048 aa6.94□□□□□ -1.3
USP47-204ENST00000525078 SVIPQ8NHG7 77 aa6.94□□□□□ -1.3
USP47-204ENST00000525078 WDR66Q8TBY9 1149 aa6.94□□□□□ -1.3
USP47-204ENST00000525078 HOOK2Q96ED9 719 aa6.94□□□□□ -1.3
USP47-204ENST00000525078 PLCD4Q9BRC7 762 aa6.94□□□□□ -1.3
USP47-204ENST00000525078 GRIP2Q9C0E4 1043 aa6.94□□□□□ -1.3
USP47-204ENST00000525078 NCOA5Q9HCD5 579 aaKnown RBP6.94□□□□□ -1.3
USP47-204ENST00000525078 ZNF180Q9UJW8 692 aa6.94□□□□□ -1.3
USP47-204ENST00000525078 PLD2O14939 933 aa6.93□□□□□ -1.3
USP47-204ENST00000525078 SIAH2O43255 324 aa6.93□□□□□ -1.3
USP47-204ENST00000525078 ADCY3O60266 1144 aa6.93□□□□□ -1.3
USP47-204ENST00000525078 GRIN3BO60391 1043 aa6.93□□□□□ -1.3
USP47-204ENST00000525078 CD53P19397 219 aa6.93□□□□□ -1.3
USP47-204ENST00000525078 GUCY2CP25092 1073 aa6.93□□□□□ -1.3
USP47-204ENST00000525078 GRNP28799 593 aaKnown RBP6.93□□□□□ -1.3
USP47-204ENST00000525078 RPIAP49247 311 aa6.93□□□□□ -1.3
USP47-204ENST00000525078 ZNF157P51786 506 aaPredicted RBP6.93□□□□□ -1.3
USP47-204ENST00000525078 PPP2R3AQ06190 1150 aa6.93□□□□□ -1.3
USP47-204ENST00000525078 POU5F1BQ06416 359 aa6.93□□□□□ -1.3
USP47-204ENST00000525078 TYRO3Q06418 890 aa6.93□□□□□ -1.3
USP47-204ENST00000525078 RAPGEF1Q13905 1077 aa6.93□□□□□ -1.3
USP47-204ENST00000525078 SPRED3Q2MJR0 410 aa6.93□□□□□ -1.3
USP47-204ENST00000525078 FNDC3BQ53EP0 1204 aaKnown RBP6.93□□□□□ -1.3
USP47-204ENST00000525078 Q6ZVU0 165 aa6.93□□□□□ -1.3
USP47-204ENST00000525078 KRT25Q7Z3Z0 450 aa6.93□□□□□ -1.3
USP47-204ENST00000525078 STRA8Q7Z7C7 330 aa6.93□□□□□ -1.3
USP47-204ENST00000525078 LRRTM3Q86VH5 581 aa6.93□□□□□ -1.3
USP47-204ENST00000525078 ZSCAN1Q8NBB4 408 aa6.93□□□□□ -1.3
USP47-204ENST00000525078 ZNF512BQ96KM6 892 aaPredicted RBP6.93□□□□□ -1.3
USP47-204ENST00000525078 ZIC5Q96T25 663 aa6.93□□□□□ -1.3
USP47-204ENST00000525078 TM9SF2Q99805 663 aa6.93□□□□□ -1.3
USP47-204ENST00000525078 YIPF4Q9BSR8 244 aa6.93□□□□□ -1.3
USP47-204ENST00000525078 CDH19Q9H159 772 aa6.93□□□□□ -1.3
USP47-204ENST00000525078 EHMT1Q9H9B1 1298 aa6.93□□□□□ -1.3
USP47-204ENST00000525078 PPCSQ9HAB8 311 aa6.93□□□□□ -1.3
USP47-204ENST00000525078 TMEM39AQ9NV64 488 aa6.93□□□□□ -1.3
USP47-204ENST00000525078 DACH1Q9UI36 760 aa6.93□□□□□ -1.3
USP47-204ENST00000525078 FBXO9Q9UK97 447 aaPredicted RBP6.93□□□□□ -1.3
USP47-204ENST00000525078 SLC12A7Q9Y666 1083 aa6.93□□□□□ -1.3
USP47-204ENST00000525078 DNAJC25-GNG10A0A024R161 153 aa6.92□□□□□ -1.3
USP47-204ENST00000525078 METTL12A8MUP2 240 aa6.92□□□□□ -1.3
USP47-204ENST00000525078 AGRPO00253 132 aa6.92□□□□□ -1.3
USP47-204ENST00000525078 NBPF7P0C2Y1 421 aaPredicted RBP6.92□□□□□ -1.3
USP47-204ENST00000525078 ITPKAP23677 461 aa6.92□□□□□ -1.3
USP47-204ENST00000525078 GPC1P35052 558 aa6.92□□□□□ -1.3
USP47-204ENST00000525078 FOXC1Q12948 553 aa6.92□□□□□ -1.3
USP47-204ENST00000525078 NNTQ13423 1086 aa6.92□□□□□ -1.3
USP47-204ENST00000525078 LRRFIP1Q32MZ4 808 aaKnown RBP6.92□□□□□ -1.3
USP47-204ENST00000525078 SLC10A6Q3KNW5 377 aa6.92□□□□□ -1.3
USP47-204ENST00000525078 FAM102BQ5T8I3 360 aa6.92□□□□□ -1.3
USP47-204ENST00000525078 TCEAL8Q8IYN2 117 aa6.92□□□□□ -1.3
USP47-204ENST00000525078 OR13H1Q8NG92 308 aa6.92□□□□□ -1.3
USP47-204ENST00000525078 ASAP3Q8TDY4 903 aa6.92□□□□□ -1.3
USP47-204ENST00000525078 CHMP4CQ96CF2 233 aa6.92□□□□□ -1.3
USP47-204ENST00000525078 SENP7Q9BQF6 1050 aa6.92□□□□□ -1.3
USP47-204ENST00000525078 CCDC8Q9H0W5 538 aaPredicted RBP6.92□□□□□ -1.3
USP47-204ENST00000525078 EPN3Q9H201 632 aa6.92□□□□□ -1.3
USP47-204ENST00000525078 ENAMQ9NRM1 1142 aa6.92□□□□□ -1.3
USP47-204ENST00000525078 SUSD5O60279 629 aa6.91□□□□□ -1.3
USP47-204ENST00000525078 MMP20O60882 483 aa6.91□□□□□ -1.3
USP47-204ENST00000525078 EYA4O95677 639 aa6.91□□□□□ -1.3
USP47-204ENST00000525078 FGAP02671 866 aa6.91□□□□□ -1.3
USP47-204ENST00000525078 ARAFP10398 606 aa6.91□□□□□ -1.3
USP47-204ENST00000525078 LRRC14Q15048 493 aa6.91□□□□□ -1.3
USP47-204ENST00000525078 GRAMD1BQ3KR37 738 aa6.91□□□□□ -1.3
USP47-204ENST00000525078 RPS26P11Q5JNZ5 115 aaPredicted RBP6.91□□□□□ -1.3
USP47-204ENST00000525078 RNF219Q5W0B1 726 aaPredicted RBP6.91□□□□□ -1.3
USP47-204ENST00000525078 NXNQ6DKJ4 435 aa6.91□□□□□ -1.3
USP47-204ENST00000525078 AHI1Q8N157 1196 aa6.91□□□□□ -1.3
USP47-204ENST00000525078 CRIPAKQ8N1N5 446 aa6.91□□□□□ -1.3
USP47-204ENST00000525078 PPM1KQ8N3J5 372 aa6.91□□□□□ -1.3
USP47-204ENST00000525078 E2F7Q96AV8 911 aa6.91□□□□□ -1.3
USP47-204ENST00000525078 CNTNAP3BQ96NU0 1288 aa6.91□□□□□ -1.3
USP47-204ENST00000525078 TRERF1Q96PN7 1200 aa6.91□□□□□ -1.3
USP47-204ENST00000525078 DHRS4Q9BTZ2 278 aa6.91□□□□□ -1.3
USP47-204ENST00000525078 CNTNAP3Q9BZ76 1288 aa6.91□□□□□ -1.3
USP47-204ENST00000525078 ANTXR1Q9H6X2 564 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms