RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 PARK7Q99497 189 aaKnown RBP14.61□□□□□ -0.07
SPARC-206ENST00000524277 PTCH2Q9Y6C5 1203 aa14.61□□□□□ -0.07
SPARC-206ENST00000524277 MROH7-TTC4A0A0A0MT08 1334 aa14.61□□□□□ -0.07
SPARC-206ENST00000524277 UQCRFS1P1P0C7P4 283 aa14.6□□□□□ -0.07
SPARC-206ENST00000524277 BTDP43251 543 aa14.6□□□□□ -0.07
SPARC-206ENST00000524277 CAP1Q01518 475 aa14.6□□□□□ -0.07
SPARC-206ENST00000524277 ZFPM1Q8IX07 1006 aa14.6□□□□□ -0.07
SPARC-206ENST00000524277 SPATA5Q8NB90 893 aa14.6□□□□□ -0.07
SPARC-206ENST00000524277 FRAT1Q92837 279 aaPredicted RBP14.6□□□□□ -0.07
SPARC-206ENST00000524277 GPR108Q9NPR9 543 aa14.6□□□□□ -0.07
SPARC-206ENST00000524277 SLC45A1Q9Y2W3 748 aa14.6□□□□□ -0.07
SPARC-206ENST00000524277 AK9Q5TCS8 1911 aa14.6□□□□□ -0.07
SPARC-206ENST00000524277 ATRNL1Q5VV63 1379 aa14.6□□□□□ -0.07
SPARC-206ENST00000524277 PTPRAP18433 802 aa14.59□□□□□ -0.07
SPARC-206ENST00000524277 ARID4AP29374 1257 aaPredicted RBP14.59□□□□□ -0.07
SPARC-206ENST00000524277 MECOMQ03112 1051 aa14.59□□□□□ -0.07
SPARC-206ENST00000524277 MOGSQ13724 837 aa14.59□□□□□ -0.07
SPARC-206ENST00000524277 SLC4A8Q2Y0W8 1093 aa14.59□□□□□ -0.07
SPARC-206ENST00000524277 ZKSCAN2Q63HK3 967 aa14.59□□□□□ -0.07
SPARC-206ENST00000524277 TBC1D2Q9BYX2 928 aa14.59□□□□□ -0.07
SPARC-206ENST00000524277 HMG20BQ9P0W2 317 aa14.59□□□□□ -0.07
SPARC-206ENST00000524277 SRRDQ9UH36 339 aa14.59□□□□□ -0.07
SPARC-206ENST00000524277 ZHX2Q9Y6X8 837 aa14.59□□□□□ -0.07
SPARC-206ENST00000524277 RFX7Q2KHR2 1363 aa14.59□□□□□ -0.07
SPARC-206ENST00000524277 A0A0G2JLL6 359 aaPredicted RBP14.58□□□□□ -0.08
SPARC-206ENST00000524277 BCAR3O75815 825 aa14.58□□□□□ -0.08
SPARC-206ENST00000524277 EN2P19622 333 aaPredicted RBP14.58□□□□□ -0.08
SPARC-206ENST00000524277 PSMC4P43686 418 aa14.58□□□□□ -0.08
SPARC-206ENST00000524277 PRRT2Q7Z6L0 340 aaPredicted RBP14.58□□□□□ -0.08
SPARC-206ENST00000524277 NSUN4Q96CB9 384 aaKnown RBP14.58□□□□□ -0.08
SPARC-206ENST00000524277 CPA4Q9UI42 421 aa14.58□□□□□ -0.08
SPARC-206ENST00000524277 AFG3L2Q9Y4W6 797 aa14.58□□□□□ -0.08
SPARC-206ENST00000524277 MYH2Q9UKX2 1941 aa14.58□□□□□ -0.08
SPARC-206ENST00000524277 RBBP6Q7Z6E9 1792 aaKnown RBP14.57□□□□□ -0.08
SPARC-206ENST00000524277 DDTLA6NHG4 134 aaPredicted RBP14.57□□□□□ -0.08
SPARC-206ENST00000524277 FMNL1O95466 1100 aaPredicted RBP14.57□□□□□ -0.08
SPARC-206ENST00000524277 CAPN2P17655 700 aa14.57□□□□□ -0.08
SPARC-206ENST00000524277 RHBDL3P58872 404 aa14.57□□□□□ -0.08
SPARC-206ENST00000524277 CCDC158Q5M9N0 1113 aa14.57□□□□□ -0.08
SPARC-206ENST00000524277 GPAT2Q6NUI2 795 aa14.57□□□□□ -0.08
SPARC-206ENST00000524277 SH3BP5LQ7L8J4 393 aa14.57□□□□□ -0.08
SPARC-206ENST00000524277 NOL10Q9BSC4 688 aaKnown RBP14.57□□□□□ -0.08
SPARC-206ENST00000524277 ARHGAP39Q9C0H5 1083 aa14.57□□□□□ -0.08
SPARC-206ENST00000524277 OSBPL5Q9H0X9 879 aaPredicted RBP14.57□□□□□ -0.08
SPARC-206ENST00000524277 ADGRA2Q96PE1 1338 aa14.57□□□□□ -0.08
SPARC-206ENST00000524277 CENPFP49454 3210 aa14.56□□□□□ -0.08
SPARC-206ENST00000524277 PNMA6EA0A0J9YXQ4 647 aa14.56□□□□□ -0.08
SPARC-206ENST00000524277 BAG3O95817 575 aa14.56□□□□□ -0.08
SPARC-206ENST00000524277 BCRP11274 1271 aa14.56□□□□□ -0.08
SPARC-206ENST00000524277 PLCG2P16885 1265 aa14.56□□□□□ -0.08
SPARC-206ENST00000524277 FCGRTP55899 365 aa14.56□□□□□ -0.08
SPARC-206ENST00000524277 PICALMQ13492 652 aa14.56□□□□□ -0.08
SPARC-206ENST00000524277 POLA2Q14181 598 aa14.56□□□□□ -0.08
SPARC-206ENST00000524277 NKX2-3Q8TAU0 364 aa14.56□□□□□ -0.08
SPARC-206ENST00000524277 RAET1EQ8TD07 263 aa14.56□□□□□ -0.08
SPARC-206ENST00000524277 CLUAP1Q96AJ1 413 aa14.56□□□□□ -0.08
SPARC-206ENST00000524277 TRIM47Q96LD4 638 aa14.56□□□□□ -0.08
SPARC-206ENST00000524277 DDX4Q9NQI0 724 aaKnown RBP14.56□□□□□ -0.08
SPARC-206ENST00000524277 RAI14Q9P0K7 980 aa14.56□□□□□ -0.08
SPARC-206ENST00000524277 LRP2BPQ9P2M1 347 aa14.56□□□□□ -0.08
SPARC-206ENST00000524277 COL2A1P02458 1487 aaPredicted RBP14.56□□□□□ -0.08
SPARC-206ENST00000524277 OSBPP22059 807 aa14.55□□□□□ -0.08
SPARC-206ENST00000524277 ATP8B2P98198 1209 aa14.55□□□□□ -0.08
SPARC-206ENST00000524277 TMEM57Q8N5G2 664 aa14.55□□□□□ -0.08
SPARC-206ENST00000524277 SSH3Q8TE77 659 aa14.55□□□□□ -0.08
SPARC-206ENST00000524277 ZNF512BQ96KM6 892 aaPredicted RBP14.55□□□□□ -0.08
SPARC-206ENST00000524277 DHX36Q9H2U1 1008 aaKnown RBP14.55□□□□□ -0.08
SPARC-206ENST00000524277 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.55□□□□□ -0.08
SPARC-206ENST00000524277 HERC5Q9UII4 1024 aaKnown RBP14.55□□□□□ -0.08
SPARC-206ENST00000524277 GRK4P32298 578 aa14.54□□□□□ -0.08
SPARC-206ENST00000524277 MCAMP43121 646 aa14.54□□□□□ -0.08
SPARC-206ENST00000524277 UBXN2AP68543 259 aa14.54□□□□□ -0.08
SPARC-206ENST00000524277 PABPC4Q13310 644 aaKnown RBP eCLIP14.54□□□□□ -0.08
SPARC-206ENST00000524277 OS9Q13438 667 aaPredicted RBP14.54□□□□□ -0.08
SPARC-206ENST00000524277 TTC39AQ5SRH9 613 aa14.54□□□□□ -0.08
SPARC-206ENST00000524277 GADL1Q6ZQY3 521 aa14.54□□□□□ -0.08
SPARC-206ENST00000524277 FTSJ3Q8IY81 847 aaKnown RBP14.54□□□□□ -0.08
SPARC-206ENST00000524277 PROCA1Q8NCQ7 364 aaPredicted RBP14.54□□□□□ -0.08
SPARC-206ENST00000524277 SH3TC2Q8TF17 1288 aa14.54□□□□□ -0.08
SPARC-206ENST00000524277 PNMA3Q9UL41 463 aa14.54□□□□□ -0.08
SPARC-206ENST00000524277 MYPNQ86TC9 1320 aa14.54□□□□□ -0.08
SPARC-206ENST00000524277 CYP2C8P10632 490 aa14.53□□□□□ -0.08
SPARC-206ENST00000524277 PPP4CP60510 307 aa14.53□□□□□ -0.08
SPARC-206ENST00000524277 TNNI3KQ59H18 835 aa14.53□□□□□ -0.08
SPARC-206ENST00000524277 TMED8Q6PL24 325 aaPredicted RBP14.53□□□□□ -0.08
SPARC-206ENST00000524277 TBC1D9Q6ZT07 1266 aa14.53□□□□□ -0.08
SPARC-206ENST00000524277 CERS3Q8IU89 383 aa14.53□□□□□ -0.08
SPARC-206ENST00000524277 TEX11Q8IYF3 940 aa14.53□□□□□ -0.08
SPARC-206ENST00000524277 SLAIN1Q8ND83 568 aa14.53□□□□□ -0.08
SPARC-206ENST00000524277 ZNF384Q8TF68 577 aa14.53□□□□□ -0.08
SPARC-206ENST00000524277 GINM1Q9NU53 330 aa14.53□□□□□ -0.08
SPARC-206ENST00000524277 PI4KBQ9UBF8 816 aa14.53□□□□□ -0.08
SPARC-206ENST00000524277 AGTPBP1Q9UPW5 1226 aa14.53□□□□□ -0.08
SPARC-206ENST00000524277 NOP58Q9Y2X3 529 aaKnown RBP14.53□□□□□ -0.08
SPARC-206ENST00000524277 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.53□□□□□ -0.08
SPARC-206ENST00000524277 FPGT-TNNI3KV9GXZ4 949 aa14.53□□□□□ -0.08
SPARC-206ENST00000524277 DOCK2Q92608 1830 aa14.52□□□□□ -0.08
SPARC-206ENST00000524277 SURF6O75683 361 aaKnown RBP14.52□□□□□ -0.09
SPARC-206ENST00000524277 CTGFP29279 349 aa14.52□□□□□ -0.09
SPARC-206ENST00000524277 CAP2P40123 477 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms