RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 GJD2Q9UKL4 321 aa17.65■□□□□ 0.42
NKX3-1-202ENST00000523261 AFG3L2Q9Y4W6 797 aa17.65■□□□□ 0.42
NKX3-1-202ENST00000523261 TCP10Q12799 353 aa17.64■□□□□ 0.41
NKX3-1-202ENST00000523261 CCDC57Q2TAC2 916 aa17.64■□□□□ 0.41
NKX3-1-202ENST00000523261 TAF7LQ5H9L4 462 aa17.64■□□□□ 0.41
NKX3-1-202ENST00000523261 PHF20L1A8MW92 1017 aa17.63■□□□□ 0.41
NKX3-1-202ENST00000523261 PTPRAP18433 802 aa17.63■□□□□ 0.41
NKX3-1-202ENST00000523261 CALD1Q05682 793 aaKnown RBP17.63■□□□□ 0.41
NKX3-1-202ENST00000523261 EPHA10Q5JZY3 1008 aa17.63■□□□□ 0.41
NKX3-1-202ENST00000523261 MAP3K21Q5TCX8 1036 aa17.63■□□□□ 0.41
NKX3-1-202ENST00000523261 SCYL3Q8IZE3 742 aa17.63■□□□□ 0.41
NKX3-1-202ENST00000523261 MAST3O60307 1309 aa17.63■□□□□ 0.41
NKX3-1-202ENST00000523261 NFIAQ12857 509 aa17.62■□□□□ 0.41
NKX3-1-202ENST00000523261 TJAP1Q5JTD0 557 aa17.62■□□□□ 0.41
NKX3-1-202ENST00000523261 DNAAF4Q8WXU2 420 aa17.62■□□□□ 0.41
NKX3-1-202ENST00000523261 TRIB2Q92519 343 aa17.62■□□□□ 0.41
NKX3-1-202ENST00000523261 FAM122AQ96E09 287 aa17.62■□□□□ 0.41
NKX3-1-202ENST00000523261 LBHD1Q9BQE6 289 aaPredicted RBP17.62■□□□□ 0.41
NKX3-1-202ENST00000523261 ADAMTS8Q9UP79 889 aa17.62■□□□□ 0.41
NKX3-1-202ENST00000523261 SUGT1Q9Y2Z0 365 aa17.62■□□□□ 0.41
NKX3-1-202ENST00000523261 PLXNB2O15031 1838 aa17.62■□□□□ 0.41
NKX3-1-202ENST00000523261 ATRNL1Q5VV63 1379 aa17.62■□□□□ 0.41
NKX3-1-202ENST00000523261 DNAH12Q6ZR08 3092 aa17.61■□□□□ 0.41
NKX3-1-202ENST00000523261 PHIPQ8WWQ0 1821 aa17.61■□□□□ 0.41
NKX3-1-202ENST00000523261 SLC4A2P04920 1241 aa17.61■□□□□ 0.41
NKX3-1-202ENST00000523261 VPS37DQ86XT2 251 aa17.61■□□□□ 0.41
NKX3-1-202ENST00000523261 TTYH1Q9H313 450 aaPredicted RBP17.61■□□□□ 0.41
NKX3-1-202ENST00000523261 PICK1Q9NRD5 415 aa17.61■□□□□ 0.41
NKX3-1-202ENST00000523261 AGTPBP1Q9UPW5 1226 aa17.61■□□□□ 0.41
NKX3-1-202ENST00000523261 FRAT2O75474 233 aaPredicted RBP17.6■□□□□ 0.41
NKX3-1-202ENST00000523261 PRKAR2AP13861 404 aaKnown RBP17.6■□□□□ 0.41
NKX3-1-202ENST00000523261 FOSL2P15408 326 aa17.6■□□□□ 0.41
NKX3-1-202ENST00000523261 FLIIQ13045 1269 aa17.6■□□□□ 0.41
NKX3-1-202ENST00000523261 WDR43Q15061 677 aaKnown RBP eCLIP17.6■□□□□ 0.41
NKX3-1-202ENST00000523261 RALBP1Q15311 655 aa17.6■□□□□ 0.41
NKX3-1-202ENST00000523261 PUS3Q9BZE2 481 aaKnown RBP17.6■□□□□ 0.41
NKX3-1-202ENST00000523261 FAM198AQ9UFP1 575 aa17.6■□□□□ 0.41
NKX3-1-202ENST00000523261 MAST2Q6P0Q8 1798 aa17.6■□□□□ 0.41
NKX3-1-202ENST00000523261 HOXD11P31277 338 aaPredicted RBP17.59■□□□□ 0.41
NKX3-1-202ENST00000523261 TREML2Q5T2D2 321 aa17.59■□□□□ 0.41
NKX3-1-202ENST00000523261 CDC42EP5Q6NZY7 148 aa17.59■□□□□ 0.41
NKX3-1-202ENST00000523261 DOCK2Q92608 1830 aa17.58■□□□□ 0.41
NKX3-1-202ENST00000523261 NCOR1O75376 2440 aa17.58■□□□□ 0.41
NKX3-1-202ENST00000523261 TRIM75PA6NK02 468 aa17.58■□□□□ 0.4
NKX3-1-202ENST00000523261 LHX8Q68G74 356 aa17.58■□□□□ 0.4
NKX3-1-202ENST00000523261 ZFPM1Q8IX07 1006 aa17.58■□□□□ 0.4
NKX3-1-202ENST00000523261 PNMA3Q9UL41 463 aa17.58■□□□□ 0.4
NKX3-1-202ENST00000523261 DAGLAQ9Y4D2 1042 aa17.58■□□□□ 0.4
NKX3-1-202ENST00000523261 LTBP2Q14767 1821 aa17.58■□□□□ 0.4
NKX3-1-202ENST00000523261 DOCK1Q14185 1865 aa17.57■□□□□ 0.4
NKX3-1-202ENST00000523261 GCLCP48506 637 aaPredicted RBP17.57■□□□□ 0.4
NKX3-1-202ENST00000523261 FKBP5Q13451 457 aaPredicted RBP17.57■□□□□ 0.4
NKX3-1-202ENST00000523261 SHHQ15465 462 aa17.57■□□□□ 0.4
NKX3-1-202ENST00000523261 CAVIN4Q5BKX8 364 aa17.57■□□□□ 0.4
NKX3-1-202ENST00000523261 TMEM265A0A087WTH1 108 aa17.56■□□□□ 0.4
NKX3-1-202ENST00000523261 CYP2B6P20813 491 aa17.56■□□□□ 0.4
NKX3-1-202ENST00000523261 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.56■□□□□ 0.4
NKX3-1-202ENST00000523261 BDP1A6H8Y1 2624 aa17.55■□□□□ 0.4
NKX3-1-202ENST00000523261 MROH5Q6ZUA9 1318 aa17.55■□□□□ 0.4
NKX3-1-202ENST00000523261 APAF1O14727 1248 aa17.55■□□□□ 0.4
NKX3-1-202ENST00000523261 SMAD3P84022 425 aaKnown RBP17.55■□□□□ 0.4
NKX3-1-202ENST00000523261 MAP3K10Q02779 954 aa17.55■□□□□ 0.4
NKX3-1-202ENST00000523261 CACNB2Q08289 660 aaPredicted RBP17.55■□□□□ 0.4
NKX3-1-202ENST00000523261 DIXDC1Q155Q3 683 aa17.55■□□□□ 0.4
NKX3-1-202ENST00000523261 C9orf50Q5SZB4 431 aa17.55■□□□□ 0.4
NKX3-1-202ENST00000523261 CCDC84Q86UT8 332 aaPredicted RBP17.55■□□□□ 0.4
NKX3-1-202ENST00000523261 USP38Q8NB14 1042 aa17.55■□□□□ 0.4
NKX3-1-202ENST00000523261 LOC285556D6RIA3 1793 aa17.54■□□□□ 0.4
NKX3-1-202ENST00000523261 XRCC5P13010 732 aaKnown RBP17.54■□□□□ 0.4
NKX3-1-202ENST00000523261 CCND3P30281 292 aaPredicted RBP17.54■□□□□ 0.4
NKX3-1-202ENST00000523261 TWISTNBQ3B726 338 aaPredicted RBP17.54■□□□□ 0.4
NKX3-1-202ENST00000523261 PROCA1Q8NCQ7 364 aaPredicted RBP17.54■□□□□ 0.4
NKX3-1-202ENST00000523261 TSR2Q969E8 191 aaKnown RBP17.54■□□□□ 0.4
NKX3-1-202ENST00000523261 LRRFIP2Q9Y608 721 aaKnown RBP17.54■□□□□ 0.4
NKX3-1-202ENST00000523261 FRMPD3Q5JV73 1810 aa17.54■□□□□ 0.4
NKX3-1-202ENST00000523261 CTNND1O60716 968 aaKnown RBP17.53■□□□□ 0.4
NKX3-1-202ENST00000523261 SLURP2P0DP57 97 aa17.53■□□□□ 0.4
NKX3-1-202ENST00000523261 MAP3K12Q12852 859 aa17.53■□□□□ 0.4
NKX3-1-202ENST00000523261 BEND3Q5T5X7 828 aa17.53■□□□□ 0.4
NKX3-1-202ENST00000523261 SH3BP5LQ7L8J4 393 aa17.53■□□□□ 0.4
NKX3-1-202ENST00000523261 SENP6Q9GZR1 1112 aaPredicted RBP17.53■□□□□ 0.4
NKX3-1-202ENST00000523261 SPINK5Q9NQ38 1064 aaPredicted RBP17.53■□□□□ 0.4
NKX3-1-202ENST00000523261 USP40Q9NVE5 1235 aa17.53■□□□□ 0.4
NKX3-1-202ENST00000523261 MORF4L1Q9UBU8 362 aa17.53■□□□□ 0.4
NKX3-1-202ENST00000523261 MYBBP1AQ9BQG0 1328 aaKnown RBP17.52■□□□□ 0.4
NKX3-1-202ENST00000523261 GRM8O00222 908 aa17.52■□□□□ 0.4
NKX3-1-202ENST00000523261 VGLL2Q8N8G2 317 aa17.52■□□□□ 0.4
NKX3-1-202ENST00000523261 F6X3S4 739 aa17.51■□□□□ 0.39
NKX3-1-202ENST00000523261 ZKSCAN1P17029 563 aaPredicted RBP17.51■□□□□ 0.39
NKX3-1-202ENST00000523261 RGS3P49796 1198 aa17.51■□□□□ 0.39
NKX3-1-202ENST00000523261 TRMT44Q8IYL2 757 aaKnown RBP17.51■□□□□ 0.39
NKX3-1-202ENST00000523261 WDR66Q8TBY9 1149 aa17.51■□□□□ 0.39
NKX3-1-202ENST00000523261 NUDT12Q9BQG2 462 aa17.51■□□□□ 0.39
NKX3-1-202ENST00000523261 ASCC2Q9H1I8 757 aaPredicted RBP17.51■□□□□ 0.39
NKX3-1-202ENST00000523261 PRKAG2Q9UGJ0 569 aa17.51■□□□□ 0.39
NKX3-1-202ENST00000523261 MYH13Q9UKX3 1938 aa17.51■□□□□ 0.39
NKX3-1-202ENST00000523261 CACNA1FO60840 1977 aa17.5■□□□□ 0.39
NKX3-1-202ENST00000523261 ENTPD3O75355 529 aa17.5■□□□□ 0.39
NKX3-1-202ENST00000523261 PDE8BO95263 885 aa17.5■□□□□ 0.39
NKX3-1-202ENST00000523261 ATN1P54259 1190 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms