RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 USP16Q9Y5T5 823 aa8.22□□□□□ -1.09
PABPC1-220ENST00000522658 NPC1L1Q9UHC9 1359 aa8.22□□□□□ -1.09
PABPC1-220ENST00000522658 FZD9O00144 591 aa8.21□□□□□ -1.1
PABPC1-220ENST00000522658 PPIP5K2O43314 1243 aa8.21□□□□□ -1.1
PABPC1-220ENST00000522658 IGHA1P01876 353 aa8.21□□□□□ -1.1
PABPC1-220ENST00000522658 THBS1P07996 1170 aa8.21□□□□□ -1.1
PABPC1-220ENST00000522658 HSPA8P11142 646 aaKnown RBP8.21□□□□□ -1.1
PABPC1-220ENST00000522658 BRPF1P55201 1214 aaPredicted RBP8.21□□□□□ -1.1
PABPC1-220ENST00000522658 PNISRQ8TF01 805 aaKnown RBP8.21□□□□□ -1.1
PABPC1-220ENST00000522658 ACDQ96AP0 544 aa8.21□□□□□ -1.1
PABPC1-220ENST00000522658 CAPNS2Q96L46 248 aa8.21□□□□□ -1.1
PABPC1-220ENST00000522658 GAS2L1Q99501 681 aaPredicted RBP8.21□□□□□ -1.1
PABPC1-220ENST00000522658 DDX21Q9NR30 783 aaKnown RBP eCLIP8.21□□□□□ -1.1
PABPC1-220ENST00000522658 ENAMQ9NRM1 1142 aa8.21□□□□□ -1.1
PABPC1-220ENST00000522658 HRH3Q9Y5N1 445 aa8.21□□□□□ -1.1
PABPC1-220ENST00000522658 NDUFB9Q9Y6M9 179 aa8.21□□□□□ -1.1
PABPC1-220ENST00000522658 LAMB4A4D0S4 1761 aa8.2□□□□□ -1.1
PABPC1-220ENST00000522658 TCERG1O14776 1098 aaKnown RBP8.2□□□□□ -1.1
PABPC1-220ENST00000522658 KCNQ3O43525 872 aa8.2□□□□□ -1.1
PABPC1-220ENST00000522658 CA12O43570 354 aa8.2□□□□□ -1.1
PABPC1-220ENST00000522658 BCRP11274 1271 aa8.2□□□□□ -1.1
PABPC1-220ENST00000522658 FOXK2Q01167 660 aa8.2□□□□□ -1.1
PABPC1-220ENST00000522658 MLLT1Q03111 559 aaPredicted RBP8.2□□□□□ -1.1
PABPC1-220ENST00000522658 GPAT2Q6NUI2 795 aa8.2□□□□□ -1.1
PABPC1-220ENST00000522658 OLFM4Q6UX06 510 aa8.2□□□□□ -1.1
PABPC1-220ENST00000522658 USP50Q70EL3 339 aaPredicted RBP8.2□□□□□ -1.1
PABPC1-220ENST00000522658 PPP1R42Q7Z4L9 355 aa8.2□□□□□ -1.1
PABPC1-220ENST00000522658 SUPT20HQ8NEM7 779 aa8.2□□□□□ -1.1
PABPC1-220ENST00000522658 GPR101Q96P66 508 aaPredicted RBP8.2□□□□□ -1.1
PABPC1-220ENST00000522658 BCL2L13Q9BXK5 485 aa8.2□□□□□ -1.1
PABPC1-220ENST00000522658 ZNF408Q9H9D4 720 aa8.2□□□□□ -1.1
PABPC1-220ENST00000522658 SNRKQ9NRH2 765 aa8.2□□□□□ -1.1
PABPC1-220ENST00000522658 RRP7AQ9Y3A4 280 aaKnown RBP8.2□□□□□ -1.1
PABPC1-220ENST00000522658 MAPK8IP3Q9UPT6 1336 aa8.2□□□□□ -1.1
PABPC1-220ENST00000522658 PRAMEF22A3QJZ6 481 aa8.19□□□□□ -1.1
PABPC1-220ENST00000522658 HTATSF1O43719 755 aaKnown RBP8.19□□□□□ -1.1
PABPC1-220ENST00000522658 GNRH1P01148 92 aa8.19□□□□□ -1.1
PABPC1-220ENST00000522658 IL2RAP01589 272 aa8.19□□□□□ -1.1
PABPC1-220ENST00000522658 F11P03951 625 aa8.19□□□□□ -1.1
PABPC1-220ENST00000522658 MYL6BP14649 208 aa8.19□□□□□ -1.1
PABPC1-220ENST00000522658 GPTP24298 496 aa8.19□□□□□ -1.1
PABPC1-220ENST00000522658 TAF7Q15545 349 aaPredicted RBP8.19□□□□□ -1.1
PABPC1-220ENST00000522658 CYP4F22Q6NT55 531 aa8.19□□□□□ -1.1
PABPC1-220ENST00000522658 TAS1R3Q7RTX0 852 aa8.19□□□□□ -1.1
PABPC1-220ENST00000522658 C7orf43Q8WVR3 580 aa8.19□□□□□ -1.1
PABPC1-220ENST00000522658 ESYT1Q9BSJ8 1104 aa8.19□□□□□ -1.1
PABPC1-220ENST00000522658 TIMMDC1Q9NPL8 285 aa8.19□□□□□ -1.1
PABPC1-220ENST00000522658 MAP3K15Q6ZN16 1313 aa8.19□□□□□ -1.1
PABPC1-220ENST00000522658 ABCC12Q96J65 1359 aa8.19□□□□□ -1.1
PABPC1-220ENST00000522658 IBTKQ9P2D0 1353 aaPredicted RBP8.19□□□□□ -1.1
PABPC1-220ENST00000522658 ADAMTSL1Q8N6G6 1762 aa8.18□□□□□ -1.1
PABPC1-220ENST00000522658 KLRG2A4D1S0 409 aaPredicted RBP8.18□□□□□ -1.1
PABPC1-220ENST00000522658 ERVV-1B6SEH8 477 aa8.18□□□□□ -1.1
PABPC1-220ENST00000522658 CELF2O95319 508 aaKnown RBP8.18□□□□□ -1.1
PABPC1-220ENST00000522658 DCTN1Q14203 1278 aa8.18□□□□□ -1.1
PABPC1-220ENST00000522658 PHACTR3Q96KR7 559 aa8.18□□□□□ -1.1
PABPC1-220ENST00000522658 TRERF1Q96PN7 1200 aa8.18□□□□□ -1.1
PABPC1-220ENST00000522658 CCDC85AQ96PX6 553 aaPredicted RBP8.18□□□□□ -1.1
PABPC1-220ENST00000522658 PNNQ9H307 717 aaKnown RBP8.18□□□□□ -1.1
PABPC1-220ENST00000522658 RAB6BQ9NRW1 208 aa8.18□□□□□ -1.1
PABPC1-220ENST00000522658 ADARB2Q9NS39 739 aaKnown RBP8.18□□□□□ -1.1
PABPC1-220ENST00000522658 CEP126Q9P2H0 1117 aa8.18□□□□□ -1.1
PABPC1-220ENST00000522658 CNTNAP5Q8WYK1 1306 aa8.18□□□□□ -1.1
PABPC1-220ENST00000522658 RIC1Q4ADV7 1423 aa8.18□□□□□ -1.1
PABPC1-220ENST00000522658 ITGB2P05107 769 aa8.17□□□□□ -1.1
PABPC1-220ENST00000522658 EPS15P42566 896 aa8.17□□□□□ -1.1
PABPC1-220ENST00000522658 CENPCQ03188 943 aa8.17□□□□□ -1.1
PABPC1-220ENST00000522658 HLFQ16534 295 aa8.17□□□□□ -1.1
PABPC1-220ENST00000522658 AOC3Q16853 763 aa8.17□□□□□ -1.1
PABPC1-220ENST00000522658 CRY2Q49AN0 593 aa8.17□□□□□ -1.1
PABPC1-220ENST00000522658 PARP10Q53GL7 1025 aa8.17□□□□□ -1.1
PABPC1-220ENST00000522658 DPP8Q6V1X1 898 aaPredicted RBP8.17□□□□□ -1.1
PABPC1-220ENST00000522658 NUCKS1Q9H1E3 243 aaKnown RBP8.17□□□□□ -1.1
PABPC1-220ENST00000522658 MX2P20592 715 aa8.16□□□□□ -1.1
PABPC1-220ENST00000522658 MAP2K2P36507 400 aa8.16□□□□□ -1.1
PABPC1-220ENST00000522658 SCNN1DP51172 638 aa8.16□□□□□ -1.1
PABPC1-220ENST00000522658 UBAP2LQ14157 1087 aaKnown RBP8.16□□□□□ -1.1
PABPC1-220ENST00000522658 TNIP1Q15025 636 aa8.16□□□□□ -1.1
PABPC1-220ENST00000522658 CIAPIN1Q6FI81 312 aa8.16□□□□□ -1.1
PABPC1-220ENST00000522658 XAGE2Q96GT9 111 aa8.16□□□□□ -1.1
PABPC1-220ENST00000522658 CRAMP1Q96RY5 1269 aa8.16□□□□□ -1.1
PABPC1-220ENST00000522658 CFHR5Q9BXR6 569 aa8.16□□□□□ -1.1
PABPC1-220ENST00000522658 CDHR2Q9BYE9 1310 aa8.16□□□□□ -1.1
PABPC1-220ENST00000522658 THSD7BQ9C0I4 1608 aa8.16□□□□□ -1.1
PABPC1-220ENST00000522658 VPS33BQ9H267 617 aa8.16□□□□□ -1.1
PABPC1-220ENST00000522658 PHF20L1A8MW92 1017 aa8.15□□□□□ -1.1
PABPC1-220ENST00000522658 H7C1D1 291 aa8.15□□□□□ -1.1
PABPC1-220ENST00000522658 TRAF5O00463 557 aa8.15□□□□□ -1.1
PABPC1-220ENST00000522658 HSP90AB3PQ58FF7 597 aa8.15□□□□□ -1.1
PABPC1-220ENST00000522658 DDX46Q7L014 1031 aaKnown RBP8.15□□□□□ -1.1
PABPC1-220ENST00000522658 PHTF2Q8N3S3 785 aa8.15□□□□□ -1.1
PABPC1-220ENST00000522658 UTP14AQ9BVJ6 771 aaKnown RBP8.15□□□□□ -1.1
PABPC1-220ENST00000522658 MIS18AQ9NYP9 233 aa8.15□□□□□ -1.1
PABPC1-220ENST00000522658 GPRC5DQ9NZD1 345 aa8.15□□□□□ -1.1
PABPC1-220ENST00000522658 TSPYL4Q9UJ04 414 aa8.15□□□□□ -1.1
PABPC1-220ENST00000522658 TRPM7Q96QT4 1865 aa8.15□□□□□ -1.11
PABPC1-220ENST00000522658 UBN2Q6ZU65 1347 aa8.14□□□□□ -1.11
PABPC1-220ENST00000522658 OIP5O43482 229 aa8.14□□□□□ -1.11
PABPC1-220ENST00000522658 AOC2O75106 756 aa8.14□□□□□ -1.11
PABPC1-220ENST00000522658 HOXA10P31260 410 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms