RNA–Protein interactions for RNA: ENST00000522013.5

CTNNA1-232, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-232ENST00000522013 DNMT3AQ9Y6K1 912 aaPredicted RBP6.78□□□□□ -1.32
CTNNA1-232ENST00000522013 NPC1L1Q9UHC9 1359 aa6.78□□□□□ -1.32
CTNNA1-232ENST00000522013 SHTN1A0MZ66 631 aa6.77□□□□□ -1.33
CTNNA1-232ENST00000522013 ADM5C9JUS6 153 aa6.77□□□□□ -1.33
CTNNA1-232ENST00000522013 TCERG1O14776 1098 aaKnown RBP6.77□□□□□ -1.33
CTNNA1-232ENST00000522013 ICMTO60725 284 aa6.77□□□□□ -1.33
CTNNA1-232ENST00000522013 FKTNO75072 461 aa6.77□□□□□ -1.33
CTNNA1-232ENST00000522013 VARSP26640 1264 aaKnown RBP6.77□□□□□ -1.33
CTNNA1-232ENST00000522013 HIRAP54198 1017 aaPredicted RBP6.77□□□□□ -1.33
CTNNA1-232ENST00000522013 EIF5P55010 431 aaKnown RBP6.77□□□□□ -1.33
CTNNA1-232ENST00000522013 ERVK-9P63128 1117 aa6.77□□□□□ -1.33
CTNNA1-232ENST00000522013 EIF4A2Q14240 407 aaKnown RBP6.77□□□□□ -1.33
CTNNA1-232ENST00000522013 AOC3Q16853 763 aa6.77□□□□□ -1.33
CTNNA1-232ENST00000522013 AMOTQ4VCS5 1084 aa6.77□□□□□ -1.33
CTNNA1-232ENST00000522013 RASAL3Q86YV0 1011 aa6.77□□□□□ -1.33
CTNNA1-232ENST00000522013 GTF3C2Q8WUA4 911 aaPredicted RBP6.77□□□□□ -1.33
CTNNA1-232ENST00000522013 OSBPL3Q9H4L5 887 aa6.77□□□□□ -1.33
CTNNA1-232ENST00000522013 SLC52A2Q9HAB3 445 aa6.77□□□□□ -1.33
CTNNA1-232ENST00000522013 PGAP2Q9UHJ9 254 aa6.77□□□□□ -1.33
CTNNA1-232ENST00000522013 SNED1Q8TER0 1413 aa6.76□□□□□ -1.33
CTNNA1-232ENST00000522013 H7C1D1 291 aa6.76□□□□□ -1.33
CTNNA1-232ENST00000522013 M0R2N6 131 aa6.76□□□□□ -1.33
CTNNA1-232ENST00000522013 STARD3NLO95772 234 aa6.76□□□□□ -1.33
CTNNA1-232ENST00000522013 MYCP01106 439 aaPredicted RBP6.76□□□□□ -1.33
CTNNA1-232ENST00000522013 FSHRP23945 695 aa6.76□□□□□ -1.33
CTNNA1-232ENST00000522013 GTF2E1P29083 439 aaPredicted RBP6.76□□□□□ -1.33
CTNNA1-232ENST00000522013 TNNT2P45379 298 aaPredicted RBP6.76□□□□□ -1.33
CTNNA1-232ENST00000522013 WNT7BP56706 349 aa6.76□□□□□ -1.33
CTNNA1-232ENST00000522013 CXCL9Q07325 125 aa6.76□□□□□ -1.33
CTNNA1-232ENST00000522013 NPAS4Q8IUM7 802 aa6.76□□□□□ -1.33
CTNNA1-232ENST00000522013 ANKLE1Q8NAG6 615 aa6.76□□□□□ -1.33
CTNNA1-232ENST00000522013 DCPSQ96C86 337 aaKnown RBP6.76□□□□□ -1.33
CTNNA1-232ENST00000522013 PUS7Q96PZ0 661 aaKnown RBP6.76□□□□□ -1.33
CTNNA1-232ENST00000522013 CYLDQ9NQC7 956 aa6.76□□□□□ -1.33
CTNNA1-232ENST00000522013 TAF1P21675 1872 aa6.76□□□□□ -1.33
CTNNA1-232ENST00000522013 MRC1P22897 1456 aa6.75□□□□□ -1.33
CTNNA1-232ENST00000522013 ZBTB24O43167 697 aaPredicted RBP6.75□□□□□ -1.33
CTNNA1-232ENST00000522013 RAD17O75943 681 aa6.75□□□□□ -1.33
CTNNA1-232ENST00000522013 CAMTA2O94983 1202 aa6.75□□□□□ -1.33
CTNNA1-232ENST00000522013 CC2D2BQ6DHV5 1058 aa6.75□□□□□ -1.33
CTNNA1-232ENST00000522013 SLC51AQ86UW1 340 aa6.75□□□□□ -1.33
CTNNA1-232ENST00000522013 TTC5Q8N0Z6 440 aa6.75□□□□□ -1.33
CTNNA1-232ENST00000522013 DPF3Q92784 378 aa6.75□□□□□ -1.33
CTNNA1-232ENST00000522013 EMID1Q96A84 441 aaPredicted RBP6.75□□□□□ -1.33
CTNNA1-232ENST00000522013 KIAA1522Q9P206 1035 aaPredicted RBP6.75□□□□□ -1.33
CTNNA1-232ENST00000522013 CNOT7Q9UIV1 285 aaKnown RBP6.75□□□□□ -1.33
CTNNA1-232ENST00000522013 LAMA3Q16787 3333 aa6.75□□□□□ -1.33
CTNNA1-232ENST00000522013 NUP98P52948 1817 aa6.75□□□□□ -1.33
CTNNA1-232ENST00000522013 CDHR2Q9BYE9 1310 aa6.75□□□□□ -1.33
CTNNA1-232ENST00000522013 KDM3BQ7LBC6 1761 aa6.74□□□□□ -1.33
CTNNA1-232ENST00000522013 ANKRD33BA6NCL7 494 aa6.74□□□□□ -1.33
CTNNA1-232ENST00000522013 GRM5P41594 1212 aa6.74□□□□□ -1.33
CTNNA1-232ENST00000522013 EPHA4P54764 986 aa6.74□□□□□ -1.33
CTNNA1-232ENST00000522013 GDF10P55107 478 aa6.74□□□□□ -1.33
CTNNA1-232ENST00000522013 ARHGAP4P98171 946 aa6.74□□□□□ -1.33
CTNNA1-232ENST00000522013 KCNC4Q03721 635 aa6.74□□□□□ -1.33
CTNNA1-232ENST00000522013 ARID5BQ14865 1188 aa6.74□□□□□ -1.33
CTNNA1-232ENST00000522013 SLC4A8Q2Y0W8 1093 aa6.74□□□□□ -1.33
CTNNA1-232ENST00000522013 TBC1D10BQ4KMP7 808 aaPredicted RBP6.74□□□□□ -1.33
CTNNA1-232ENST00000522013 TPTE2Q6XPS3 522 aa6.74□□□□□ -1.33
CTNNA1-232ENST00000522013 OTOP1Q7RTM1 612 aa6.74□□□□□ -1.33
CTNNA1-232ENST00000522013 GLYCTKQ8IVS8 523 aa6.74□□□□□ -1.33
CTNNA1-232ENST00000522013 RPGRQ92834 1020 aaKnown RBP6.74□□□□□ -1.33
CTNNA1-232ENST00000522013 CDK15Q96Q40 435 aa6.74□□□□□ -1.33
CTNNA1-232ENST00000522013 PRDM6Q9NQX0 595 aa6.74□□□□□ -1.33
CTNNA1-232ENST00000522013 ZNRF3Q9ULT6 936 aa6.74□□□□□ -1.33
CTNNA1-232ENST00000522013 DDX60Q8IY21 1712 aaKnown RBP6.73□□□□□ -1.33
CTNNA1-232ENST00000522013 SOX1O00570 391 aaPredicted RBP6.73□□□□□ -1.33
CTNNA1-232ENST00000522013 LILRA1O75019 489 aa6.73□□□□□ -1.33
CTNNA1-232ENST00000522013 ZNF16P17020 682 aaPredicted RBP6.73□□□□□ -1.33
CTNNA1-232ENST00000522013 IL6STP40189 918 aaPredicted RBP6.73□□□□□ -1.33
CTNNA1-232ENST00000522013 NAA30Q147X3 362 aaPredicted RBP6.73□□□□□ -1.33
CTNNA1-232ENST00000522013 TNIP1Q15025 636 aa6.73□□□□□ -1.33
CTNNA1-232ENST00000522013 EHBP1Q8NDI1 1231 aa6.73□□□□□ -1.33
CTNNA1-232ENST00000522013 TMX4Q9H1E5 349 aaPredicted RBP6.73□□□□□ -1.33
CTNNA1-232ENST00000522013 TSPAN10Q9H1Z9 355 aaPredicted RBP6.73□□□□□ -1.33
CTNNA1-232ENST00000522013 R3HDMLQ9H3Y0 253 aa6.73□□□□□ -1.33
CTNNA1-232ENST00000522013 ETNK1Q9HBU6 452 aa6.73□□□□□ -1.33
CTNNA1-232ENST00000522013 LGR6Q9HBX8 967 aa6.73□□□□□ -1.33
CTNNA1-232ENST00000522013 NIP7Q9Y221 180 aaKnown RBP eCLIP6.73□□□□□ -1.33
CTNNA1-232ENST00000522013 ZNF652Q9Y2D9 606 aa6.73□□□□□ -1.33
CTNNA1-232ENST00000522013 VCANP13611 3396 aa6.73□□□□□ -1.33
CTNNA1-232ENST00000522013 KLRG2A4D1S0 409 aaPredicted RBP6.72□□□□□ -1.33
CTNNA1-232ENST00000522013 RNMTO43148 476 aaKnown RBP6.72□□□□□ -1.33
CTNNA1-232ENST00000522013 IGSF3O75054 1194 aa6.72□□□□□ -1.33
CTNNA1-232ENST00000522013 ERCC3P19447 782 aa6.72□□□□□ -1.33
CTNNA1-232ENST00000522013 IGFBP4P22692 258 aa6.72□□□□□ -1.33
CTNNA1-232ENST00000522013 PIP4K2AP48426 406 aaPredicted RBP6.72□□□□□ -1.33
CTNNA1-232ENST00000522013 TAGLNQ01995 201 aaKnown RBP6.72□□□□□ -1.33
CTNNA1-232ENST00000522013 SREBF2Q12772 1141 aa6.72□□□□□ -1.33
CTNNA1-232ENST00000522013 NEUROD1Q13562 356 aa6.72□□□□□ -1.33
CTNNA1-232ENST00000522013 PPP1R18Q6NYC8 613 aa6.72□□□□□ -1.33
CTNNA1-232ENST00000522013 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.72□□□□□ -1.33
CTNNA1-232ENST00000522013 DEFB123Q8N688 67 aa6.72□□□□□ -1.33
CTNNA1-232ENST00000522013 SCG3Q8WXD2 468 aaKnown RBP6.72□□□□□ -1.33
CTNNA1-232ENST00000522013 CDCA5Q96FF9 252 aa6.72□□□□□ -1.33
CTNNA1-232ENST00000522013 IGSF5Q9NSI5 407 aa6.72□□□□□ -1.33
CTNNA1-232ENST00000522013 GGA3Q9NZ52 723 aa6.72□□□□□ -1.33
CTNNA1-232ENST00000522013 POLKQ9UBT6 870 aa6.72□□□□□ -1.33
CTNNA1-232ENST00000522013 SERTAD1Q9UHV2 236 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms