RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 TRAK2O60296 914 aa8□□□□□ -1.13
CTNNA1-228ENST00000521640 BRD1O95696 1058 aa8□□□□□ -1.13
CTNNA1-228ENST00000521640 MAP4K4O95819 1239 aaPredicted RBP8□□□□□ -1.13
CTNNA1-228ENST00000521640 FBXO45P0C2W1 286 aa8□□□□□ -1.13
CTNNA1-228ENST00000521640 SIK1P57059 783 aa8□□□□□ -1.13
CTNNA1-228ENST00000521640 MCMDC2Q4G0Z9 681 aa8□□□□□ -1.13
CTNNA1-228ENST00000521640 ZBTB33Q86T24 672 aa8□□□□□ -1.13
CTNNA1-228ENST00000521640 DZIP3Q86Y13 1208 aaKnown RBP8□□□□□ -1.13
CTNNA1-228ENST00000521640 CRIPAKQ8N1N5 446 aa8□□□□□ -1.13
CTNNA1-228ENST00000521640 MARCH10Q8NA82 808 aaPredicted RBP8□□□□□ -1.13
CTNNA1-228ENST00000521640 PNMA1Q8ND90 353 aa8□□□□□ -1.13
CTNNA1-228ENST00000521640 DSCC1Q9BVC3 393 aa8□□□□□ -1.13
CTNNA1-228ENST00000521640 RBM8AQ9Y5S9 174 aaKnown RBP8□□□□□ -1.13
CTNNA1-228ENST00000521640 CYP46A1Q9Y6A2 500 aa8□□□□□ -1.13
CTNNA1-228ENST00000521640 ATRNO75882 1429 aa8□□□□□ -1.13
CTNNA1-228ENST00000521640 CNTNAP4Q9C0A0 1308 aa8□□□□□ -1.13
CTNNA1-228ENST00000521640 A0A0D9SFI3 127 aa7.99□□□□□ -1.13
CTNNA1-228ENST00000521640 A0A1B0GUL7 405 aa7.99□□□□□ -1.13
CTNNA1-228ENST00000521640 ANKRD18BA2A2Z9 1011 aa7.99□□□□□ -1.13
CTNNA1-228ENST00000521640 TAF5LO75529 589 aa7.99□□□□□ -1.13
CTNNA1-228ENST00000521640 BAG4O95429 457 aaKnown RBP7.99□□□□□ -1.13
CTNNA1-228ENST00000521640 ADAMTS2O95450 1211 aa7.99□□□□□ -1.13
CTNNA1-228ENST00000521640 HMGB1P09429 215 aaKnown RBP7.99□□□□□ -1.13
CTNNA1-228ENST00000521640 SSFA2P28290 1259 aa7.99□□□□□ -1.13
CTNNA1-228ENST00000521640 SMCPP49901 116 aaPredicted RBP7.99□□□□□ -1.13
CTNNA1-228ENST00000521640 PTH1RQ03431 593 aa7.99□□□□□ -1.13
CTNNA1-228ENST00000521640 KLHL40Q2TBA0 621 aa7.99□□□□□ -1.13
CTNNA1-228ENST00000521640 CCDC158Q5M9N0 1113 aa7.99□□□□□ -1.13
CTNNA1-228ENST00000521640 CREB3L3Q68CJ9 461 aa7.99□□□□□ -1.13
CTNNA1-228ENST00000521640 INTS5Q6P9B9 1019 aaKnown RBP7.99□□□□□ -1.13
CTNNA1-228ENST00000521640 CLEC4GQ6UXB4 293 aa7.99□□□□□ -1.13
CTNNA1-228ENST00000521640 RUFY3Q7L099 469 aa7.99□□□□□ -1.13
CTNNA1-228ENST00000521640 VASH1Q7L8A9 365 aaPredicted RBP7.99□□□□□ -1.13
CTNNA1-228ENST00000521640 DDX60Q8IY21 1712 aaKnown RBP7.99□□□□□ -1.13
CTNNA1-228ENST00000521640 TTLL11Q8NHH1 800 aa7.99□□□□□ -1.13
CTNNA1-228ENST00000521640 CHMP4CQ96CF2 233 aa7.99□□□□□ -1.13
CTNNA1-228ENST00000521640 PAG1Q9NWQ8 432 aa7.99□□□□□ -1.13
CTNNA1-228ENST00000521640 ZNF652Q9Y2D9 606 aa7.99□□□□□ -1.13
CTNNA1-228ENST00000521640 CHMP3Q9Y3E7 222 aa7.99□□□□□ -1.13
CTNNA1-228ENST00000521640 MAP4K5Q9Y4K4 846 aa7.99□□□□□ -1.13
CTNNA1-228ENST00000521640 MYH7P12883 1935 aa7.99□□□□□ -1.13
CTNNA1-228ENST00000521640 MROH5Q6ZUA9 1318 aa7.99□□□□□ -1.13
CTNNA1-228ENST00000521640 WDR33Q9C0J8 1336 aaKnown RBP7.99□□□□□ -1.13
CTNNA1-228ENST00000521640 COL24A1Q17RW2 1714 aa7.98□□□□□ -1.13
CTNNA1-228ENST00000521640 FSD2A1L4K1 749 aa7.98□□□□□ -1.13
CTNNA1-228ENST00000521640 ZBBXA8MT70 800 aa7.98□□□□□ -1.13
CTNNA1-228ENST00000521640 IRS4O14654 1257 aaPredicted RBP7.98□□□□□ -1.13
CTNNA1-228ENST00000521640 SLC27A2O14975 620 aa7.98□□□□□ -1.13
CTNNA1-228ENST00000521640 AXIN1O15169 862 aa7.98□□□□□ -1.13
CTNNA1-228ENST00000521640 CASTP20810 708 aaKnown RBP7.98□□□□□ -1.13
CTNNA1-228ENST00000521640 FSHRP23945 695 aa7.98□□□□□ -1.13
CTNNA1-228ENST00000521640 CRKLP46109 303 aaKnown RBP7.98□□□□□ -1.13
CTNNA1-228ENST00000521640 AK2P54819 239 aa7.98□□□□□ -1.13
CTNNA1-228ENST00000521640 IRF5Q13568 498 aa7.98□□□□□ -1.13
CTNNA1-228ENST00000521640 HLFQ16534 295 aa7.98□□□□□ -1.13
CTNNA1-228ENST00000521640 CTC1Q2NKJ3 1217 aa7.98□□□□□ -1.13
CTNNA1-228ENST00000521640 TAF7LQ5H9L4 462 aa7.98□□□□□ -1.13
CTNNA1-228ENST00000521640 ZMYM1Q5SVZ6 1142 aa7.98□□□□□ -1.13
CTNNA1-228ENST00000521640 PRPF40BQ6NWY9 871 aaKnown RBP7.98□□□□□ -1.13
CTNNA1-228ENST00000521640 FAM227BQ96M60 508 aa7.98□□□□□ -1.13
CTNNA1-228ENST00000521640 KLF16Q9BXK1 252 aaPredicted RBP7.98□□□□□ -1.13
CTNNA1-228ENST00000521640 UPF3BQ9BZI7 483 aaKnown RBP7.98□□□□□ -1.13
CTNNA1-228ENST00000521640 GDPD2Q9HCC8 539 aa7.98□□□□□ -1.13
CTNNA1-228ENST00000521640 PDRG1Q9NUG6 133 aa7.98□□□□□ -1.13
CTNNA1-228ENST00000521640 RIPOR2Q9Y4F9 1068 aa7.98□□□□□ -1.13
CTNNA1-228ENST00000521640 LY75O60449 1722 aa7.98□□□□□ -1.13
CTNNA1-228ENST00000521640 MYH14Q7Z406 1995 aaKnown RBP7.97□□□□□ -1.13
CTNNA1-228ENST00000521640 POTECB2RU33 542 aa7.97□□□□□ -1.13
CTNNA1-228ENST00000521640 CAMTA2O94983 1202 aa7.97□□□□□ -1.13
CTNNA1-228ENST00000521640 IFIT1P09914 478 aaKnown RBP7.97□□□□□ -1.13
CTNNA1-228ENST00000521640 UQCRFS1P1P0C7P4 283 aa7.97□□□□□ -1.13
CTNNA1-228ENST00000521640 ITGA6P23229 1130 aa7.97□□□□□ -1.13
CTNNA1-228ENST00000521640 HMGB2P26583 209 aaKnown RBP7.97□□□□□ -1.13
CTNNA1-228ENST00000521640 KCNJ4P48050 445 aa7.97□□□□□ -1.13
CTNNA1-228ENST00000521640 TTF1Q15361 905 aaPredicted RBP7.97□□□□□ -1.13
CTNNA1-228ENST00000521640 LRRC24Q50LG9 513 aa7.97□□□□□ -1.13
CTNNA1-228ENST00000521640 ZSCAN25Q6NSZ9 544 aa7.97□□□□□ -1.13
CTNNA1-228ENST00000521640 BLOC1S2Q6QNY1 142 aa7.97□□□□□ -1.13
CTNNA1-228ENST00000521640 FBXL16Q8N461 479 aa7.97□□□□□ -1.13
CTNNA1-228ENST00000521640 ZGPATQ8N5A5 531 aaKnown RBP7.97□□□□□ -1.13
CTNNA1-228ENST00000521640 VGLL2Q8N8G2 317 aa7.97□□□□□ -1.13
CTNNA1-228ENST00000521640 JARID2Q92833 1246 aaPredicted RBP7.97□□□□□ -1.13
CTNNA1-228ENST00000521640 SYTL4Q96C24 671 aaPredicted RBP7.97□□□□□ -1.13
CTNNA1-228ENST00000521640 SLC10A4Q96EP9 437 aa7.97□□□□□ -1.13
CTNNA1-228ENST00000521640 FAM89AQ96GI7 184 aa7.97□□□□□ -1.13
CTNNA1-228ENST00000521640 JAKMIP1Q96N16 626 aaKnown RBP7.97□□□□□ -1.13
CTNNA1-228ENST00000521640 TRMT112Q9UI30 125 aaKnown RBP7.97□□□□□ -1.13
CTNNA1-228ENST00000521640 ATP6V1DQ9Y5K8 247 aa7.97□□□□□ -1.13
CTNNA1-228ENST00000521640 UBN2Q6ZU65 1347 aa7.97□□□□□ -1.13
CTNNA1-228ENST00000521640 DOCK2Q92608 1830 aa7.96□□□□□ -1.13
CTNNA1-228ENST00000521640 AKAP11Q9UKA4 1901 aa7.96□□□□□ -1.13
CTNNA1-228ENST00000521640 RNF113AO15541 343 aaKnown RBP7.96□□□□□ -1.14
CTNNA1-228ENST00000521640 IGSF3O75054 1194 aa7.96□□□□□ -1.14
CTNNA1-228ENST00000521640 PDE8BO95263 885 aa7.96□□□□□ -1.14
CTNNA1-228ENST00000521640 MBD3O95983 291 aa7.96□□□□□ -1.14
CTNNA1-228ENST00000521640 PDCP20941 246 aa7.96□□□□□ -1.14
CTNNA1-228ENST00000521640 RPS6KB1P23443 525 aa7.96□□□□□ -1.14
CTNNA1-228ENST00000521640 ARID4AP29374 1257 aaPredicted RBP7.96□□□□□ -1.14
CTNNA1-228ENST00000521640 PUM3Q15397 648 aaKnown RBP7.96□□□□□ -1.14
CTNNA1-228ENST00000521640 ATP2B3Q16720 1220 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms