RNA–Protein interactions for RNA: ENST00000521122.1

PVT1-210, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 221 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-210ENST00000521122 MFSD14AQ96MC6 490 aa11.52□□□□□ -0.57
PVT1-210ENST00000521122 TDRD3Q9H7E2 651 aaKnown RBP11.52□□□□□ -0.57
PVT1-210ENST00000521122 PLXNB2O15031 1838 aa11.51□□□□□ -0.57
PVT1-210ENST00000521122 GRXCR1A8MXD5 290 aa11.51□□□□□ -0.57
PVT1-210ENST00000521122 DNM1LO00429 736 aa11.51□□□□□ -0.57
PVT1-210ENST00000521122 INPP5BP32019 993 aa11.51□□□□□ -0.57
PVT1-210ENST00000521122 DCTN1Q14203 1278 aa11.51□□□□□ -0.57
PVT1-210ENST00000521122 PROSER3Q2NL68 480 aa11.51□□□□□ -0.57
PVT1-210ENST00000521122 SLC39A5Q6ZMH5 540 aa11.51□□□□□ -0.57
PVT1-210ENST00000521122 HFE2Q6ZVN8 426 aa11.51□□□□□ -0.57
PVT1-210ENST00000521122 FASTKD5Q7L8L6 764 aaKnown RBP11.51□□□□□ -0.57
PVT1-210ENST00000521122 FKBP1AP62942 108 aaKnown RBP11.5□□□□□ -0.57
PVT1-210ENST00000521122 FPGSQ05932 587 aa11.5□□□□□ -0.57
PVT1-210ENST00000521122 SNX17Q15036 470 aa11.5□□□□□ -0.57
PVT1-210ENST00000521122 TRIM60Q495X7 471 aa11.5□□□□□ -0.57
PVT1-210ENST00000521122 CCDC152Q4G0S7 254 aa11.5□□□□□ -0.57
PVT1-210ENST00000521122 HLA-CQ95604 372 aa11.5□□□□□ -0.57
PVT1-210ENST00000521122 HOOK2Q96ED9 719 aa11.5□□□□□ -0.57
PVT1-210ENST00000521122 CNTNAP3BQ96NU0 1288 aa11.5□□□□□ -0.57
PVT1-210ENST00000521122 CNTNAP3Q9BZ76 1288 aa11.5□□□□□ -0.57
PVT1-210ENST00000521122 MINPP1Q9UNW1 487 aa11.5□□□□□ -0.57
PVT1-210ENST00000521122 FAM208BQ5VWN6 2430 aa11.49□□□□□ -0.57
PVT1-210ENST00000521122 A0A0G2JLL6 359 aaPredicted RBP11.49□□□□□ -0.57
PVT1-210ENST00000521122 MED19A0JLT2 244 aaPredicted RBP11.49□□□□□ -0.57
PVT1-210ENST00000521122 DCXO43602 365 aa11.49□□□□□ -0.57
PVT1-210ENST00000521122 ANXA1P04083 346 aa11.49□□□□□ -0.57
PVT1-210ENST00000521122 XRCC5P13010 732 aaKnown RBP11.49□□□□□ -0.57
PVT1-210ENST00000521122 CYP2B6P20813 491 aa11.49□□□□□ -0.57
PVT1-210ENST00000521122 AIMP1Q12904 312 aaKnown RBP11.49□□□□□ -0.57
PVT1-210ENST00000521122 RAB30Q15771 203 aa11.49□□□□□ -0.57
PVT1-210ENST00000521122 DCAF15Q66K64 600 aa11.49□□□□□ -0.57
PVT1-210ENST00000521122 PRRT2Q7Z6L0 340 aaPredicted RBP11.49□□□□□ -0.57
PVT1-210ENST00000521122 TRMT44Q8IYL2 757 aaKnown RBP11.49□□□□□ -0.57
PVT1-210ENST00000521122 PRRX2Q99811 253 aa11.49□□□□□ -0.57
PVT1-210ENST00000521122 ISCA1Q9BUE6 129 aa11.49□□□□□ -0.57
PVT1-210ENST00000521122 MSRAQ9UJ68 235 aa11.49□□□□□ -0.57
PVT1-210ENST00000521122 LEMD3Q9Y2U8 911 aa11.49□□□□□ -0.57
PVT1-210ENST00000521122 DMXL1Q9Y485 3027 aa11.49□□□□□ -0.57
PVT1-210ENST00000521122 MAP1BP46821 2468 aaKnown RBP11.48□□□□□ -0.57
PVT1-210ENST00000521122 VPS13AQ96RL7 3174 aa11.48□□□□□ -0.57
PVT1-210ENST00000521122 POTEB3A0JP26 581 aa11.48□□□□□ -0.57
PVT1-210ENST00000521122 U2SURPO15042 1029 aaKnown RBP11.48□□□□□ -0.57
PVT1-210ENST00000521122 POU3F3P20264 500 aaPredicted RBP11.48□□□□□ -0.57
PVT1-210ENST00000521122 KLRK1P26718 216 aa11.48□□□□□ -0.57
PVT1-210ENST00000521122 TCF15Q12870 199 aa11.48□□□□□ -0.57
PVT1-210ENST00000521122 POTEBQ6S5H4 581 aa11.48□□□□□ -0.57
PVT1-210ENST00000521122 FAM178BQ8IXR5 827 aa11.48□□□□□ -0.57
PVT1-210ENST00000521122 PNISRQ8TF01 805 aaKnown RBP11.48□□□□□ -0.57
PVT1-210ENST00000521122 XAGE3Q8WTP9 111 aa11.48□□□□□ -0.57
PVT1-210ENST00000521122 ZNF341Q9BYN7 854 aa11.48□□□□□ -0.57
PVT1-210ENST00000521122 SLC28A3Q9HAS3 691 aa11.48□□□□□ -0.57
PVT1-210ENST00000521122 CD209Q9NNX6 404 aa11.48□□□□□ -0.57
PVT1-210ENST00000521122 BSDC1Q9NW68 430 aaPredicted RBP11.48□□□□□ -0.57
PVT1-210ENST00000521122 DAGLAQ9Y4D2 1042 aa11.48□□□□□ -0.57
PVT1-210ENST00000521122 A0A0G2JMZ2 1700 aa11.48□□□□□ -0.57
PVT1-210ENST00000521122 HTATSF1O43719 755 aaKnown RBP11.47□□□□□ -0.57
PVT1-210ENST00000521122 HSP90B1P14625 803 aaKnown RBP11.47□□□□□ -0.57
PVT1-210ENST00000521122 ZKSCAN1P17029 563 aaPredicted RBP11.47□□□□□ -0.57
PVT1-210ENST00000521122 SSTR3P32745 418 aaPredicted RBP11.47□□□□□ -0.57
PVT1-210ENST00000521122 ACAP1Q15027 740 aa11.47□□□□□ -0.57
PVT1-210ENST00000521122 RASIP1Q5U651 963 aa11.47□□□□□ -0.57
PVT1-210ENST00000521122 LPAR1Q92633 364 aa11.47□□□□□ -0.57
PVT1-210ENST00000521122 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.47□□□□□ -0.572e-10■□□□□ 8.1
PVT1-210ENST00000521122 NKX2-4Q9H2Z4 354 aa11.47□□□□□ -0.57
PVT1-210ENST00000521122 PANK3Q9H999 370 aa11.47□□□□□ -0.57
PVT1-210ENST00000521122 IGSF5Q9NSI5 407 aa11.47□□□□□ -0.57
PVT1-210ENST00000521122 SERPINA10Q9UK55 444 aa11.47□□□□□ -0.57
PVT1-210ENST00000521122 TACC3Q9Y6A5 838 aa11.47□□□□□ -0.57
PVT1-210ENST00000521122 MTCH2Q9Y6C9 303 aa11.47□□□□□ -0.57
PVT1-210ENST00000521122 ZNF292O60281 2723 aa11.47□□□□□ -0.57
PVT1-210ENST00000521122 MYBBP1AQ9BQG0 1328 aaKnown RBP11.46□□□□□ -0.57
PVT1-210ENST00000521122 PRKAR2BP31323 418 aa11.46□□□□□ -0.57
PVT1-210ENST00000521122 NOL9Q5SY16 702 aaKnown RBP11.46□□□□□ -0.57
PVT1-210ENST00000521122 C1orf53Q5VUE5 145 aa11.46□□□□□ -0.57
PVT1-210ENST00000521122 GADL1Q6ZQY3 521 aa11.46□□□□□ -0.57
PVT1-210ENST00000521122 DZIP1LQ8IYY4 767 aaKnown RBP11.46□□□□□ -0.57
PVT1-210ENST00000521122 USP24Q9UPU5 2620 aa11.46□□□□□ -0.58
PVT1-210ENST00000521122 FLNBO75369 2602 aaKnown RBP11.45□□□□□ -0.58
PVT1-210ENST00000521122 ATRNL1Q5VV63 1379 aa11.45□□□□□ -0.58
PVT1-210ENST00000521122 KIAA0355O15063 1070 aa11.45□□□□□ -0.58
PVT1-210ENST00000521122 GTPBP6O43824 516 aaPredicted RBP11.45□□□□□ -0.58
PVT1-210ENST00000521122 MSCO60682 206 aa11.45□□□□□ -0.58
PVT1-210ENST00000521122 RAG1P15918 1043 aa11.45□□□□□ -0.58
PVT1-210ENST00000521122 IER5LQ5T953 404 aa11.45□□□□□ -0.58
PVT1-210ENST00000521122 SOCS4Q8WXH5 440 aa11.45□□□□□ -0.58
PVT1-210ENST00000521122 CCDC85AQ96PX6 553 aaPredicted RBP11.45□□□□□ -0.58
PVT1-210ENST00000521122 FAM86C1Q9NVL1 165 aa11.45□□□□□ -0.58
PVT1-210ENST00000521122 ZNF112Q9UJU3 913 aa11.45□□□□□ -0.58
PVT1-210ENST00000521122 ATP5J2-PTCD1G3V325 749 aa11.44□□□□□ -0.58
PVT1-210ENST00000521122 CLTBP09497 229 aa11.44□□□□□ -0.58
PVT1-210ENST00000521122 EIF2S2P20042 333 aaKnown RBP11.44□□□□□ -0.58
PVT1-210ENST00000521122 TLE2Q04725 743 aa11.44□□□□□ -0.58
PVT1-210ENST00000521122 CDC5LQ99459 802 aaKnown RBP11.44□□□□□ -0.58
PVT1-210ENST00000521122 NUDT12Q9BQG2 462 aa11.44□□□□□ -0.58
PVT1-210ENST00000521122 DDX20Q9UHI6 824 aaKnown RBP11.44□□□□□ -0.58
PVT1-210ENST00000521122 MAST4O15021 2626 aa11.44□□□□□ -0.58
PVT1-210ENST00000521122 GCLCP48506 637 aaPredicted RBP11.43□□□□□ -0.58
PVT1-210ENST00000521122 TRIM28Q13263 835 aaKnown RBP11.43□□□□□ -0.58
PVT1-210ENST00000521122 MIGA2Q7L4E1 593 aa11.43□□□□□ -0.58
PVT1-210ENST00000521122 FAM83AQ86UY5 434 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms