RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 TNFAIP1Q13829 316 aa21.28■■□□□ 1
SDC2-205ENST00000520233 ALX1Q15699 326 aa21.28■■□□□ 1
SDC2-205ENST00000520233 EAPPQ56P03 285 aaPredicted RBP21.28■■□□□ 1
SDC2-205ENST00000520233 FAM83AQ86UY5 434 aa21.28■■□□□ 1
SDC2-205ENST00000520233 APOBEC3FQ8IUX4 373 aaKnown RBP21.28■■□□□ 1
SDC2-205ENST00000520233 MAPKAPK5Q8IW41 473 aa21.28■■□□□ 1
SDC2-205ENST00000520233 EPB41L4AQ9HCS5 686 aaPredicted RBP21.28■■□□□ 1
SDC2-205ENST00000520233 TNNI2P48788 182 aa21.27■■□□□ 1
SDC2-205ENST00000520233 MAP4K1Q92918 833 aa21.27■■□□□ 1
SDC2-205ENST00000520233 DCPSQ96C86 337 aaKnown RBP21.27■■□□□ 1
SDC2-205ENST00000520233 OSBPL5Q9H0X9 879 aaPredicted RBP21.27■■□□□ 1
SDC2-205ENST00000520233 GPBP1L1Q9HC44 474 aaPredicted RBP21.27■■□□□ 1
SDC2-205ENST00000520233 ZMYM6O95789 1325 aa21.27■□□□□ 0.99
SDC2-205ENST00000520233 CNTNAP1P78357 1384 aa21.26■□□□□ 0.99
SDC2-205ENST00000520233 EPB41L2O43491 1005 aaKnown RBP21.26■□□□□ 0.99
SDC2-205ENST00000520233 FAM151AQ8WW52 585 aa21.26■□□□□ 0.99
SDC2-205ENST00000520233 NAPBQ9H115 298 aa21.26■□□□□ 0.99
SDC2-205ENST00000520233 FOCADQ5VW36 1801 aa21.25■□□□□ 0.99
SDC2-205ENST00000520233 FGAP02671 866 aa21.25■□□□□ 0.99
SDC2-205ENST00000520233 TDO2P48775 406 aa21.25■□□□□ 0.99
SDC2-205ENST00000520233 TCP10Q12799 353 aa21.25■□□□□ 0.99
SDC2-205ENST00000520233 CDK5RAP2Q96SN8 1893 aa21.25■□□□□ 0.99
SDC2-205ENST00000520233 BACH2Q9BYV9 841 aa21.25■□□□□ 0.99
SDC2-205ENST00000520233 MCM9Q9NXL9 1143 aa21.25■□□□□ 0.99
SDC2-205ENST00000520233 U3KPZ7 1027 aaPredicted RBP21.25■□□□□ 0.99
SDC2-205ENST00000520233 COL2A1P02458 1487 aaPredicted RBP21.25■□□□□ 0.99
SDC2-205ENST00000520233 SEC24BO95487 1268 aa21.24■□□□□ 0.99
SDC2-205ENST00000520233 RASA3Q14644 834 aa21.24■□□□□ 0.99
SDC2-205ENST00000520233 ZFPM1Q8IX07 1006 aa21.24■□□□□ 0.99
SDC2-205ENST00000520233 ARPP21Q9UBL0 812 aaPredicted RBP21.24■□□□□ 0.99
SDC2-205ENST00000520233 CTNNA3Q9UI47 895 aa21.24■□□□□ 0.99
SDC2-205ENST00000520233 CLEC11AQ9Y240 323 aa21.24■□□□□ 0.99
SDC2-205ENST00000520233 PPP2R3BQ9Y5P8 575 aa21.24■□□□□ 0.99
SDC2-205ENST00000520233 USP17L12C9JPN9 530 aa21.23■□□□□ 0.99
SDC2-205ENST00000520233 USP17L21D6R901 530 aa21.23■□□□□ 0.99
SDC2-205ENST00000520233 POTEIP0CG38 1075 aa21.23■□□□□ 0.99
SDC2-205ENST00000520233 POTEJP0CG39 1038 aa21.23■□□□□ 0.99
SDC2-205ENST00000520233 SBK1Q52WX2 424 aa21.23■□□□□ 0.99
SDC2-205ENST00000520233 CTR9Q6PD62 1173 aa21.23■□□□□ 0.99
SDC2-205ENST00000520233 LDHDQ86WU2 507 aa21.23■□□□□ 0.99
SDC2-205ENST00000520233 DEFB129Q9H1M3 183 aa21.23■□□□□ 0.99
SDC2-205ENST00000520233 DHX36Q9H2U1 1008 aaKnown RBP21.23■□□□□ 0.99
SDC2-205ENST00000520233 SAP30BPQ9UHR5 308 aaKnown RBP21.23■□□□□ 0.99
SDC2-205ENST00000520233 ATRNL1Q5VV63 1379 aa21.23■□□□□ 0.99
SDC2-205ENST00000520233 TTC6Q86TZ1 520 aa21.22■□□□□ 0.99
SDC2-205ENST00000520233 SULF1Q8IWU6 871 aa21.22■□□□□ 0.99
SDC2-205ENST00000520233 AMOTL1Q8IY63 956 aa21.22■□□□□ 0.99
SDC2-205ENST00000520233 USP26Q9BXU7 913 aa21.22■□□□□ 0.99
SDC2-205ENST00000520233 TMEM39BQ9GZU3 492 aa21.22■□□□□ 0.99
SDC2-205ENST00000520233 PALD1Q9ULE6 856 aa21.22■□□□□ 0.99
SDC2-205ENST00000520233 RBM8AQ9Y5S9 174 aaKnown RBP21.22■□□□□ 0.99
SDC2-205ENST00000520233 DDX60LQ5H9U9 1706 aaKnown RBP21.21■□□□□ 0.99
SDC2-205ENST00000520233 POLR3DP05423 398 aaPredicted RBP21.21■□□□□ 0.99
SDC2-205ENST00000520233 C12orf60Q5U649 245 aa21.21■□□□□ 0.99
SDC2-205ENST00000520233 SH3BP5LQ7L8J4 393 aa21.21■□□□□ 0.99
SDC2-205ENST00000520233 KRT26Q7Z3Y9 468 aa21.21■□□□□ 0.99
SDC2-205ENST00000520233 SCAF8Q9UPN6 1271 aaKnown RBP21.21■□□□□ 0.99
SDC2-205ENST00000520233 NAV1Q8NEY1 1877 aa21.21■□□□□ 0.99
SDC2-205ENST00000520233 DDTLA6NHG4 134 aaPredicted RBP21.2■□□□□ 0.98
SDC2-205ENST00000520233 HLA-DOAP06340 250 aa21.2■□□□□ 0.98
SDC2-205ENST00000520233 NECTIN1Q15223 517 aa21.2■□□□□ 0.98
SDC2-205ENST00000520233 CDC37L1Q7L3B6 337 aa21.2■□□□□ 0.98
SDC2-205ENST00000520233 ZSCAN29Q8IWY8 852 aaPredicted RBP21.2■□□□□ 0.98
SDC2-205ENST00000520233 MINDY4BA8MYZ0 360 aa21.19■□□□□ 0.98
SDC2-205ENST00000520233 CYP2D6P10635 497 aa21.19■□□□□ 0.98
SDC2-205ENST00000520233 IMMTQ16891 758 aaKnown RBP21.19■□□□□ 0.98
SDC2-205ENST00000520233 TEPSINQ96N21 525 aa21.19■□□□□ 0.98
SDC2-205ENST00000520233 ANAPC4Q9UJX5 808 aa21.19■□□□□ 0.98
SDC2-205ENST00000520233 CYP2D7A0A087X1C5 515 aa21.18■□□□□ 0.98
SDC2-205ENST00000520233 ZNF213O14771 459 aa21.18■□□□□ 0.98
SDC2-205ENST00000520233 KIF3CO14782 793 aa21.18■□□□□ 0.98
SDC2-205ENST00000520233 PLCD1P51178 756 aa21.18■□□□□ 0.98
SDC2-205ENST00000520233 PPARAQ07869 468 aa21.18■□□□□ 0.98
SDC2-205ENST00000520233 MAP1SQ66K74 1059 aaPredicted RBP21.18■□□□□ 0.98
SDC2-205ENST00000520233 USP48Q86UV5 1035 aa21.18■□□□□ 0.98
SDC2-205ENST00000520233 CSRNP1Q96S65 589 aa21.18■□□□□ 0.98
SDC2-205ENST00000520233 EHD4Q9H223 541 aa21.18■□□□□ 0.98
SDC2-205ENST00000520233 PI4KBQ9UBF8 816 aa21.18■□□□□ 0.98
SDC2-205ENST00000520233 TAOK2Q9UL54 1235 aa21.18■□□□□ 0.98
SDC2-205ENST00000520233 MYH1P12882 1939 aa21.17■□□□□ 0.98
SDC2-205ENST00000520233 ADM5C9JUS6 153 aa21.17■□□□□ 0.98
SDC2-205ENST00000520233 MCCP23508 829 aa21.17■□□□□ 0.98
SDC2-205ENST00000520233 HSPA4P34932 840 aa21.17■□□□□ 0.98
SDC2-205ENST00000520233 SLC4A8Q2Y0W8 1093 aa21.17■□□□□ 0.98
SDC2-205ENST00000520233 CREB3L3Q68CJ9 461 aa21.17■□□□□ 0.98
SDC2-205ENST00000520233 CHADLQ6NUI6 762 aa21.17■□□□□ 0.98
SDC2-205ENST00000520233 FOXP4Q8IVH2 680 aaPredicted RBP21.17■□□□□ 0.98
SDC2-205ENST00000520233 ZNF784Q8NCA9 323 aaPredicted RBP21.17■□□□□ 0.98
SDC2-205ENST00000520233 GLIS2Q9BZE0 524 aaPredicted RBP21.17■□□□□ 0.98
SDC2-205ENST00000520233 BAZ2AQ9UIF9 1905 aaKnown RBP21.17■□□□□ 0.98
SDC2-205ENST00000520233 ROBO3Q96MS0 1386 aa21.16■□□□□ 0.98
SDC2-205ENST00000520233 SLC27A2O14975 620 aa21.16■□□□□ 0.98
SDC2-205ENST00000520233 CYP21A2P08686 494 aa21.16■□□□□ 0.98
SDC2-205ENST00000520233 EVX2Q03828 476 aa21.16■□□□□ 0.98
SDC2-205ENST00000520233 RNF20Q5VTR2 975 aa21.16■□□□□ 0.98
SDC2-205ENST00000520233 HOOK2Q96ED9 719 aa21.16■□□□□ 0.98
SDC2-205ENST00000520233 UPF2Q9HAU5 1272 aaKnown RBP21.16■□□□□ 0.98
SDC2-205ENST00000520233 SMIM22K7EJ46 135 aa21.15■□□□□ 0.98
SDC2-205ENST00000520233 SLC3A2P08195 630 aaKnown RBP21.15■□□□□ 0.98
SDC2-205ENST00000520233 HAND2P61296 217 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms