RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 FAM221AA4D161 298 aa10.18□□□□□ -0.78
PTPN12-213ENST00000519553 SLFN14P0C7P3 912 aa10.18□□□□□ -0.78
PTPN12-213ENST00000519553 LMNB1P20700 586 aa10.18□□□□□ -0.78
PTPN12-213ENST00000519553 EIF4A3P38919 411 aaKnown RBP10.18□□□□□ -0.78
PTPN12-213ENST00000519553 NPM2Q86SE8 214 aaKnown RBP10.18□□□□□ -0.78
PTPN12-213ENST00000519553 TPSG1Q9NRR2 321 aa10.18□□□□□ -0.78
PTPN12-213ENST00000519553 F13A1P00488 732 aa10.17□□□□□ -0.78
PTPN12-213ENST00000519553 INPP5AQ14642 412 aa10.17□□□□□ -0.78
PTPN12-213ENST00000519553 GPAT2Q6NUI2 795 aa10.17□□□□□ -0.78
PTPN12-213ENST00000519553 LRFN4Q6PJG9 635 aa10.17□□□□□ -0.78
PTPN12-213ENST00000519553 GOLM1Q8NBJ4 401 aa10.17□□□□□ -0.78
PTPN12-213ENST00000519553 MYRFLQ96LU7 910 aa10.17□□□□□ -0.78
PTPN12-213ENST00000519553 FANCD2OSQ96PS1 177 aa10.17□□□□□ -0.78
PTPN12-213ENST00000519553 RING1Q06587 406 aa10.16□□□□□ -0.78
PTPN12-213ENST00000519553 SNAP47Q5SQN1 464 aa10.16□□□□□ -0.78
PTPN12-213ENST00000519553 GATAD2BQ8WXI9 593 aa10.16□□□□□ -0.78
PTPN12-213ENST00000519553 JARID2Q92833 1246 aaPredicted RBP10.16□□□□□ -0.78
PTPN12-213ENST00000519553 UTP4Q969X6 686 aaKnown RBP10.16□□□□□ -0.78
PTPN12-213ENST00000519553 PLPPR2Q96GM1 343 aa10.16□□□□□ -0.78
PTPN12-213ENST00000519553 DISC1Q9NRI5 854 aa10.16□□□□□ -0.78
PTPN12-213ENST00000519553 FAM105AQ9NUU6 356 aa10.16□□□□□ -0.78
PTPN12-213ENST00000519553 DCDC2CA8MYV0 355 aa10.15□□□□□ -0.78
PTPN12-213ENST00000519553 SART1O43290 800 aaKnown RBP10.15□□□□□ -0.78
PTPN12-213ENST00000519553 GREM1O60565 184 aa10.15□□□□□ -0.78
PTPN12-213ENST00000519553 CILPO75339 1184 aa10.15□□□□□ -0.78
PTPN12-213ENST00000519553 ERVK-24P63145 666 aa10.15□□□□□ -0.78
PTPN12-213ENST00000519553 WIPI1Q5MNZ9 446 aaPredicted RBP10.15□□□□□ -0.78
PTPN12-213ENST00000519553 DYMQ7RTS9 669 aa10.15□□□□□ -0.78
PTPN12-213ENST00000519553 ZNF296Q8WUU4 475 aaPredicted RBP10.15□□□□□ -0.78
PTPN12-213ENST00000519553 MSTNO14793 375 aa10.14□□□□□ -0.79
PTPN12-213ENST00000519553 GAS2O43903 313 aaKnown RBP10.14□□□□□ -0.79
PTPN12-213ENST00000519553 NTF4P34130 210 aa10.14□□□□□ -0.79
PTPN12-213ENST00000519553 FAM196AQ6ZSG2 479 aa10.14□□□□□ -0.79
PTPN12-213ENST00000519553 TP53INP1Q96A56 240 aa10.14□□□□□ -0.79
PTPN12-213ENST00000519553 HIF3AQ9Y2N7 669 aa10.14□□□□□ -0.79
PTPN12-213ENST00000519553 SUPT16HQ9Y5B9 1047 aaKnown RBP10.14□□□□□ -0.79
PTPN12-213ENST00000519553 CSADQ9Y600 493 aa10.14□□□□□ -0.79
PTPN12-213ENST00000519553 GFRA2O00451 464 aa10.13□□□□□ -0.79
PTPN12-213ENST00000519553 NEFMP07197 916 aa10.13□□□□□ -0.79
PTPN12-213ENST00000519553 RPL6Q02878 288 aaKnown RBP10.13□□□□□ -0.79
PTPN12-213ENST00000519553 SGO2Q562F6 1265 aa10.13□□□□□ -0.79
PTPN12-213ENST00000519553 CDPF1Q6NVV7 123 aa10.13□□□□□ -0.79
PTPN12-213ENST00000519553 CYFIP1Q7L576 1253 aa10.13□□□□□ -0.79
PTPN12-213ENST00000519553 C12orf40Q86WS4 652 aa10.13□□□□□ -0.79
PTPN12-213ENST00000519553 FAM20CQ8IXL6 584 aa10.13□□□□□ -0.79
PTPN12-213ENST00000519553 ZNF654Q8IZM8 581 aa10.13□□□□□ -0.79
PTPN12-213ENST00000519553 FBXO27Q8NI29 283 aa10.13□□□□□ -0.79
PTPN12-213ENST00000519553 TGIF2Q9GZN2 237 aa10.13□□□□□ -0.79
PTPN12-213ENST00000519553 ATXN3LQ9H3M9 355 aa10.13□□□□□ -0.79
PTPN12-213ENST00000519553 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.13□□□□□ -0.79
PTPN12-213ENST00000519553 SNCAIPQ9Y6H5 919 aa10.13□□□□□ -0.79
PTPN12-213ENST00000519553 BMP3P12645 472 aa10.12□□□□□ -0.79
PTPN12-213ENST00000519553 ERCC5P28715 1186 aaPredicted RBP10.12□□□□□ -0.79
PTPN12-213ENST00000519553 ASPAP45381 313 aa10.12□□□□□ -0.79
PTPN12-213ENST00000519553 CRKP46108 304 aa10.12□□□□□ -0.79
PTPN12-213ENST00000519553 DOC2BQ14184 412 aa10.12□□□□□ -0.79
PTPN12-213ENST00000519553 PPM1JQ5JR12 505 aa10.12□□□□□ -0.79
PTPN12-213ENST00000519553 KIAA0825Q8IV33 1275 aa10.12□□□□□ -0.79
PTPN12-213ENST00000519553 ELMO3Q96BJ8 720 aa10.12□□□□□ -0.79
PTPN12-213ENST00000519553 SPON2Q9BUD6 331 aa10.12□□□□□ -0.79
PTPN12-213ENST00000519553 LRRC3Q9BY71 257 aa10.12□□□□□ -0.79
PTPN12-213ENST00000519553 ACSS3Q9H6R3 686 aa10.12□□□□□ -0.79
PTPN12-213ENST00000519553 IGHA1P01876 353 aa10.11□□□□□ -0.79
PTPN12-213ENST00000519553 TTLL4Q14679 1199 aa10.11□□□□□ -0.79
PTPN12-213ENST00000519553 HDXQ7Z353 690 aa10.11□□□□□ -0.79
PTPN12-213ENST00000519553 EZH1Q92800 747 aaPredicted RBP10.11□□□□□ -0.79
PTPN12-213ENST00000519553 EAF1Q96JC9 268 aaPredicted RBP10.11□□□□□ -0.79
PTPN12-213ENST00000519553 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.1□□□□□ -0.79
PTPN12-213ENST00000519553 DHX15O43143 795 aaKnown RBP10.1□□□□□ -0.79
PTPN12-213ENST00000519553 MPP2Q14168 576 aa10.1□□□□□ -0.79
PTPN12-213ENST00000519553 ZBTB37Q5TC79 503 aa10.1□□□□□ -0.79
PTPN12-213ENST00000519553 RNF214Q8ND24 703 aa10.1□□□□□ -0.79
PTPN12-213ENST00000519553 FBLIM1Q8WUP2 373 aa10.1□□□□□ -0.79
PTPN12-213ENST00000519553 UBP1Q9NZI7 540 aa10.1□□□□□ -0.79
PTPN12-213ENST00000519553 PRAMEF27A3QJZ7 478 aa10.09□□□□□ -0.79
PTPN12-213ENST00000519553 HCLS1P14317 486 aaPredicted RBP10.09□□□□□ -0.79
PTPN12-213ENST00000519553 RAB6AP20340 208 aa10.09□□□□□ -0.79
PTPN12-213ENST00000519553 MAP4P27816 1152 aaKnown RBP10.09□□□□□ -0.79
PTPN12-213ENST00000519553 USP11P51784 963 aa10.09□□□□□ -0.79
PTPN12-213ENST00000519553 RSPO4Q2I0M5 234 aaPredicted RBP10.09□□□□□ -0.79
PTPN12-213ENST00000519553 NKAPLQ5M9Q1 402 aa10.09□□□□□ -0.79
PTPN12-213ENST00000519553 PRR23CQ6ZRP0 262 aa10.09□□□□□ -0.79
PTPN12-213ENST00000519553 REC114Q7Z4M0 266 aa10.09□□□□□ -0.79
PTPN12-213ENST00000519553 NT5C1AQ9BXI3 368 aa10.09□□□□□ -0.79
PTPN12-213ENST00000519553 ACBD3Q9H3P7 528 aa10.09□□□□□ -0.79
PTPN12-213ENST00000519553 SEMA6CQ9H3T2 930 aa10.09□□□□□ -0.79
PTPN12-213ENST00000519553 TLR3O15455 904 aaKnown RBP10.08□□□□□ -0.8
PTPN12-213ENST00000519553 BPNT1O95861 308 aa10.08□□□□□ -0.8
PTPN12-213ENST00000519553 UBE3DQ7Z6J8 389 aa10.08□□□□□ -0.8
PTPN12-213ENST00000519553 ISL2Q96A47 359 aa10.08□□□□□ -0.8
PTPN12-213ENST00000519553 PIDD1Q9HB75 910 aa10.08□□□□□ -0.8
PTPN12-213ENST00000519553 POLR3KQ9Y2Y1 108 aaPredicted RBP10.08□□□□□ -0.8
PTPN12-213ENST00000519553 ROBO2Q9HCK4 1378 aa10.08□□□□□ -0.8
PTPN12-213ENST00000519553 FANCGO15287 622 aa10.07□□□□□ -0.8
PTPN12-213ENST00000519553 PAK2Q13177 524 aa10.07□□□□□ -0.8
PTPN12-213ENST00000519553 BEND4Q6ZU67 534 aa10.07□□□□□ -0.8
PTPN12-213ENST00000519553 CCSER2Q9H7U1 834 aa10.07□□□□□ -0.8
PTPN12-213ENST00000519553 RAXQ9Y2V3 346 aa10.07□□□□□ -0.8
PTPN12-213ENST00000519553 TACC3Q9Y6A5 838 aa10.07□□□□□ -0.8
PTPN12-213ENST00000519553 NFICP08651 508 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms