RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 SSH3Q8TE77 659 aa15.32■□□□□ 0.04
TRAPPC9-206ENST00000519482 KCNH4Q9UQ05 1017 aa15.32■□□□□ 0.04
TRAPPC9-206ENST00000519482 ATRNL1Q5VV63 1379 aa15.32■□□□□ 0.04
TRAPPC9-206ENST00000519482 DOCK1Q14185 1865 aa15.31■□□□□ 0.04
TRAPPC9-206ENST00000519482 GPR75-ASB3A0A0A6YYF3 556 aa15.31■□□□□ 0.04
TRAPPC9-206ENST00000519482 NPM3O75607 178 aaKnown RBP15.31■□□□□ 0.04
TRAPPC9-206ENST00000519482 LDHCP07864 332 aa15.31■□□□□ 0.04
TRAPPC9-206ENST00000519482 GSTO1P78417 241 aa15.31■□□□□ 0.04
TRAPPC9-206ENST00000519482 MAP3K10Q02779 954 aa15.31■□□□□ 0.04
TRAPPC9-206ENST00000519482 MECOMQ03112 1051 aa15.31■□□□□ 0.04
TRAPPC9-206ENST00000519482 MAST2Q6P0Q8 1798 aa15.31■□□□□ 0.04
TRAPPC9-206ENST00000519482 PTPRFP10586 1907 aa15.31■□□□□ 0.04
TRAPPC9-206ENST00000519482 ANKRD23Q86SG2 305 aa15.3■□□□□ 0.04
TRAPPC9-206ENST00000519482 ZSCAN29Q8IWY8 852 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC9-206ENST00000519482 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC9-206ENST00000519482 ZNF384Q8TF68 577 aa15.3■□□□□ 0.04
TRAPPC9-206ENST00000519482 PHIPQ8WWQ0 1821 aa15.3■□□□□ 0.04
TRAPPC9-206ENST00000519482 NSUN4Q96CB9 384 aaKnown RBP15.3■□□□□ 0.04
TRAPPC9-206ENST00000519482 MYO5AQ9Y4I1 1855 aaKnown RBP15.29■□□□□ 0.04
TRAPPC9-206ENST00000519482 PHF20L1A8MW92 1017 aa15.29■□□□□ 0.04
TRAPPC9-206ENST00000519482 CXCL11O14625 94 aa15.29■□□□□ 0.04
TRAPPC9-206ENST00000519482 ZBTB7BO15156 539 aaPredicted RBP15.29■□□□□ 0.04
TRAPPC9-206ENST00000519482 MCAMP43121 646 aa15.29■□□□□ 0.04
TRAPPC9-206ENST00000519482 RHBDL3P58872 404 aa15.29■□□□□ 0.04
TRAPPC9-206ENST00000519482 PI16Q6UXB8 463 aa15.29■□□□□ 0.04
TRAPPC9-206ENST00000519482 SH3BP5LQ7L8J4 393 aa15.29■□□□□ 0.04
TRAPPC9-206ENST00000519482 ITPRIPQ8IWB1 547 aa15.29■□□□□ 0.04
TRAPPC9-206ENST00000519482 DDX4Q9NQI0 724 aaKnown RBP15.29■□□□□ 0.04
TRAPPC9-206ENST00000519482 HTTP42858 3142 aa15.29■□□□□ 0.04
TRAPPC9-206ENST00000519482 ZSWIM8A7E2V4 1837 aa15.29■□□□□ 0.04
TRAPPC9-206ENST00000519482 COL2A1P02458 1487 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC9-206ENST00000519482 DDTLA6NHG4 134 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC9-206ENST00000519482 SURF6O75683 361 aaKnown RBP15.28■□□□□ 0.04
TRAPPC9-206ENST00000519482 GNRH1P01148 92 aa15.28■□□□□ 0.04
TRAPPC9-206ENST00000519482 CAP1Q01518 475 aa15.28■□□□□ 0.04
TRAPPC9-206ENST00000519482 OS9Q13438 667 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC9-206ENST00000519482 PICALMQ13492 652 aa15.28■□□□□ 0.04
TRAPPC9-206ENST00000519482 KIF22Q14807 665 aa15.28■□□□□ 0.04
TRAPPC9-206ENST00000519482 TNNI3KQ59H18 835 aa15.28■□□□□ 0.04
TRAPPC9-206ENST00000519482 CCDC158Q5M9N0 1113 aa15.28■□□□□ 0.04
TRAPPC9-206ENST00000519482 TBC1D9Q6ZT07 1266 aa15.28■□□□□ 0.04
TRAPPC9-206ENST00000519482 SCYL3Q8IZE3 742 aa15.28■□□□□ 0.04
TRAPPC9-206ENST00000519482 ARMC5Q96C12 935 aa15.28■□□□□ 0.04
TRAPPC9-206ENST00000519482 RAI14Q9P0K7 980 aa15.28■□□□□ 0.04
TRAPPC9-206ENST00000519482 NOP58Q9Y2X3 529 aaKnown RBP15.28■□□□□ 0.04
TRAPPC9-206ENST00000519482 FPGT-TNNI3KV9GXZ4 949 aa15.28■□□□□ 0.04
TRAPPC9-206ENST00000519482 CDK5RAP2Q96SN8 1893 aa15.28■□□□□ 0.04
TRAPPC9-206ENST00000519482 FOCADQ5VW36 1801 aa15.28■□□□□ 0.04
TRAPPC9-206ENST00000519482 ATAD5Q96QE3 1844 aa15.28■□□□□ 0.04
TRAPPC9-206ENST00000519482 PDHXO00330 501 aa15.27■□□□□ 0.04
TRAPPC9-206ENST00000519482 TBC1D12O60347 775 aa15.27■□□□□ 0.04
TRAPPC9-206ENST00000519482 CTNND1O60716 968 aaKnown RBP15.27■□□□□ 0.04
TRAPPC9-206ENST00000519482 IGSF3O75054 1194 aa15.27■□□□□ 0.04
TRAPPC9-206ENST00000519482 RLBP1P12271 317 aa15.27■□□□□ 0.04
TRAPPC9-206ENST00000519482 LACTBP83111 547 aaPredicted RBP15.27■□□□□ 0.04
TRAPPC9-206ENST00000519482 MOGSQ13724 837 aa15.27■□□□□ 0.04
TRAPPC9-206ENST00000519482 TTC39AQ5SRH9 613 aa15.27■□□□□ 0.04
TRAPPC9-206ENST00000519482 C17orf99Q6UX52 265 aa15.27■□□□□ 0.04
TRAPPC9-206ENST00000519482 ZNF512BQ96KM6 892 aaPredicted RBP15.27■□□□□ 0.04
TRAPPC9-206ENST00000519482 PICK1Q9NRD5 415 aa15.27■□□□□ 0.04
TRAPPC9-206ENST00000519482 LRP2BPQ9P2M1 347 aa15.27■□□□□ 0.04
TRAPPC9-206ENST00000519482 MGAMO43451 1857 aa15.27■□□□□ 0.03
TRAPPC9-206ENST00000519482 KIAA0100Q14667 2235 aaKnown RBP15.27■□□□□ 0.03
TRAPPC9-206ENST00000519482 PRMT2P55345 433 aa15.26■□□□□ 0.03
TRAPPC9-206ENST00000519482 RRP1P56182 461 aaKnown RBP15.26■□□□□ 0.03
TRAPPC9-206ENST00000519482 FASTKD5Q7L8L6 764 aaKnown RBP15.26■□□□□ 0.03
TRAPPC9-206ENST00000519482 DBNDD2Q9BQY9 259 aa15.26■□□□□ 0.03
TRAPPC9-206ENST00000519482 C1orf115Q9H7X2 142 aa15.26■□□□□ 0.03
TRAPPC9-206ENST00000519482 ZHX2Q9Y6X8 837 aa15.26■□□□□ 0.03
TRAPPC9-206ENST00000519482 ADGRA2Q96PE1 1338 aa15.25■□□□□ 0.03
TRAPPC9-206ENST00000519482 A0A0G2JLL6 359 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC9-206ENST00000519482 PTPRAP18433 802 aa15.25■□□□□ 0.03
TRAPPC9-206ENST00000519482 PRRT2Q7Z6L0 340 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC9-206ENST00000519482 NBPF11Q86T75 865 aa15.25■□□□□ 0.03
TRAPPC9-206ENST00000519482 NOL10Q9BSC4 688 aaKnown RBP15.25■□□□□ 0.03
TRAPPC9-206ENST00000519482 AFG3L2Q9Y4W6 797 aa15.25■□□□□ 0.03
TRAPPC9-206ENST00000519482 PTCH2Q9Y6C5 1203 aa15.25■□□□□ 0.03
TRAPPC9-206ENST00000519482 BAG3O95817 575 aa15.24■□□□□ 0.03
TRAPPC9-206ENST00000519482 MS4A1P11836 297 aa15.24■□□□□ 0.03
TRAPPC9-206ENST00000519482 IRX6P78412 446 aaPredicted RBP15.24■□□□□ 0.03
TRAPPC9-206ENST00000519482 SLC9C1Q4G0N8 1177 aa15.24■□□□□ 0.03
TRAPPC9-206ENST00000519482 GPAT2Q6NUI2 795 aa15.24■□□□□ 0.03
TRAPPC9-206ENST00000519482 ZNF333Q96JL9 665 aa15.24■□□□□ 0.03
TRAPPC9-206ENST00000519482 PARK7Q99497 189 aaKnown RBP15.24■□□□□ 0.03
TRAPPC9-206ENST00000519482 OSBPL5Q9H0X9 879 aaPredicted RBP15.24■□□□□ 0.03
TRAPPC9-206ENST00000519482 SIPA1L1O43166 1804 aa15.23■□□□□ 0.03
TRAPPC9-206ENST00000519482 CYP2E1P05181 493 aaPredicted RBP15.23■□□□□ 0.03
TRAPPC9-206ENST00000519482 PLCG2P16885 1265 aa15.23■□□□□ 0.03
TRAPPC9-206ENST00000519482 PPP4CP60510 307 aa15.23■□□□□ 0.03
TRAPPC9-206ENST00000519482 PRPF38BQ5VTL8 546 aaKnown RBP15.23■□□□□ 0.03
TRAPPC9-206ENST00000519482 NAA16Q6N069 864 aaPredicted RBP15.23■□□□□ 0.03
TRAPPC9-206ENST00000519482 CEP85Q6P2H3 762 aa15.23■□□□□ 0.03
TRAPPC9-206ENST00000519482 TEX11Q8IYF3 940 aa15.23■□□□□ 0.03
TRAPPC9-206ENST00000519482 ARHGAP39Q9C0H5 1083 aa15.23■□□□□ 0.03
TRAPPC9-206ENST00000519482 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.23■□□□□ 0.038e-7■■■■■ 45.8
TRAPPC9-206ENST00000519482 SNRKQ9NRH2 765 aa15.23■□□□□ 0.03
TRAPPC9-206ENST00000519482 CPA4Q9UI42 421 aa15.23■□□□□ 0.03
TRAPPC9-206ENST00000519482 SLC45A1Q9Y2W3 748 aa15.23■□□□□ 0.03
TRAPPC9-206ENST00000519482 CENPFP49454 3210 aa15.23■□□□□ 0.03
TRAPPC9-206ENST00000519482 LOC285556D6RIA3 1793 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms