RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 BOLA2Q9H3K6 86 aa9.18□□□□□ -0.94
SDCBP-206ENST00000519115 USP40Q9NVE5 1235 aa9.18□□□□□ -0.94
SDCBP-206ENST00000519115 ANGEL1Q9UNK9 670 aaKnown RBP9.18□□□□□ -0.94
SDCBP-206ENST00000519115 SIPA1L1O43166 1804 aa9.17□□□□□ -0.94
SDCBP-206ENST00000519115 PCNTO95613 3336 aa9.17□□□□□ -0.94
SDCBP-206ENST00000519115 RPAP1Q9BWH6 1393 aaPredicted RBP9.17□□□□□ -0.94
SDCBP-206ENST00000519115 GPR75-ASB3A0A0A6YYF3 556 aa9.17□□□□□ -0.94
SDCBP-206ENST00000519115 LDHCP07864 332 aa9.17□□□□□ -0.94
SDCBP-206ENST00000519115 CYP7A1P22680 504 aa9.17□□□□□ -0.94
SDCBP-206ENST00000519115 ECE1P42892 770 aa9.17□□□□□ -0.94
SDCBP-206ENST00000519115 ZNF157P51786 506 aaPredicted RBP9.17□□□□□ -0.94
SDCBP-206ENST00000519115 FKBP1BP68106 108 aa9.17□□□□□ -0.94
SDCBP-206ENST00000519115 SUPT20HL1Q3ZLR7 823 aa9.17□□□□□ -0.94
SDCBP-206ENST00000519115 TTC22Q5TAA0 569 aa9.17□□□□□ -0.94
SDCBP-206ENST00000519115 FKBP1CQ5VVH2 108 aa9.17□□□□□ -0.94
SDCBP-206ENST00000519115 RGMBQ6NW40 437 aa9.17□□□□□ -0.94
SDCBP-206ENST00000519115 ARMC9Q7Z3E5 817 aa9.17□□□□□ -0.94
SDCBP-206ENST00000519115 MAGEB6Q8N7X4 407 aa9.17□□□□□ -0.94
SDCBP-206ENST00000519115 JMYQ8N9B5 988 aa9.17□□□□□ -0.94
SDCBP-206ENST00000519115 FAM163AQ96GL9 167 aaPredicted RBP9.17□□□□□ -0.94
SDCBP-206ENST00000519115 AATFQ9NY61 560 aaKnown RBP eCLIP9.17□□□□□ -0.94
SDCBP-206ENST00000519115 FAM198AQ9UFP1 575 aa9.17□□□□□ -0.94
SDCBP-206ENST00000519115 BAZ2AQ9UIF9 1905 aaKnown RBP9.17□□□□□ -0.94
SDCBP-206ENST00000519115 ATAD5Q96QE3 1844 aa9.17□□□□□ -0.94
SDCBP-206ENST00000519115 WDHD1O75717 1129 aaPredicted RBP9.16□□□□□ -0.94
SDCBP-206ENST00000519115 ATP5JP18859 108 aa9.16□□□□□ -0.94
SDCBP-206ENST00000519115 RHBDL3P58872 404 aa9.16□□□□□ -0.94
SDCBP-206ENST00000519115 PICALMQ13492 652 aa9.16□□□□□ -0.94
SDCBP-206ENST00000519115 C8orf34Q49A92 452 aa9.16□□□□□ -0.94
SDCBP-206ENST00000519115 CASC1Q6TDU7 716 aa9.16□□□□□ -0.94
SDCBP-206ENST00000519115 FAM83AQ86UY5 434 aa9.16□□□□□ -0.94
SDCBP-206ENST00000519115 RASAL3Q86YV0 1011 aa9.16□□□□□ -0.94
SDCBP-206ENST00000519115 ZFPM1Q8IX07 1006 aa9.16□□□□□ -0.94
SDCBP-206ENST00000519115 MIGA1Q8NAN2 632 aa9.16□□□□□ -0.94
SDCBP-206ENST00000519115 SH3RF3Q8TEJ3 882 aaPredicted RBP9.16□□□□□ -0.94
SDCBP-206ENST00000519115 HHIPL1Q96JK4 782 aa9.16□□□□□ -0.94
SDCBP-206ENST00000519115 CLMNQ96JQ2 1002 aa9.16□□□□□ -0.94
SDCBP-206ENST00000519115 ZIC5Q96T25 663 aa9.16□□□□□ -0.94
SDCBP-206ENST00000519115 HAUS7Q99871 368 aa9.16□□□□□ -0.94
SDCBP-206ENST00000519115 NOL10Q9BSC4 688 aaKnown RBP9.16□□□□□ -0.94
SDCBP-206ENST00000519115 DDX4Q9NQI0 724 aaKnown RBP9.16□□□□□ -0.94
SDCBP-206ENST00000519115 ECHDC1Q9NTX5 307 aa9.16□□□□□ -0.94
SDCBP-206ENST00000519115 PAG1Q9NWQ8 432 aa9.16□□□□□ -0.94
SDCBP-206ENST00000519115 LAMB1P07942 1786 aa9.16□□□□□ -0.94
SDCBP-206ENST00000519115 DOCK1Q14185 1865 aa9.15□□□□□ -0.94
SDCBP-206ENST00000519115 DDX60LQ5H9U9 1706 aaKnown RBP9.15□□□□□ -0.94
SDCBP-206ENST00000519115 FAM155AB1AL88 458 aaPredicted RBP9.15□□□□□ -0.94
SDCBP-206ENST00000519115 PPP1R12BO60237 982 aaPredicted RBP9.15□□□□□ -0.94
SDCBP-206ENST00000519115 SLC10A3P09131 477 aa9.15□□□□□ -0.94
SDCBP-206ENST00000519115 PDE6AP16499 860 aa9.15□□□□□ -0.94
SDCBP-206ENST00000519115 DYNLL1P63167 89 aaKnown RBP9.15□□□□□ -0.94
SDCBP-206ENST00000519115 MAP3K12Q12852 859 aa9.15□□□□□ -0.94
SDCBP-206ENST00000519115 MKRN3Q13064 507 aaKnown RBP9.15□□□□□ -0.94
SDCBP-206ENST00000519115 TTF1Q15361 905 aaPredicted RBP9.15□□□□□ -0.94
SDCBP-206ENST00000519115 SLFNL1Q499Z3 407 aa9.15□□□□□ -0.94
SDCBP-206ENST00000519115 TMED8Q6PL24 325 aaPredicted RBP9.15□□□□□ -0.94
SDCBP-206ENST00000519115 MIGA2Q7L4E1 593 aa9.15□□□□□ -0.94
SDCBP-206ENST00000519115 ZSCAN29Q8IWY8 852 aaPredicted RBP9.15□□□□□ -0.94
SDCBP-206ENST00000519115 TEX11Q8IYF3 940 aa9.15□□□□□ -0.94
SDCBP-206ENST00000519115 FAM151AQ8WW52 585 aa9.15□□□□□ -0.94
SDCBP-206ENST00000519115 UPF2Q9HAU5 1272 aaKnown RBP9.15□□□□□ -0.94
SDCBP-206ENST00000519115 MYH8P13535 1937 aa9.15□□□□□ -0.95
SDCBP-206ENST00000519115 DDTLA6NHG4 134 aaPredicted RBP9.14□□□□□ -0.95
SDCBP-206ENST00000519115 HIP1O00291 1037 aa9.14□□□□□ -0.95
SDCBP-206ENST00000519115 ENTPD3O75355 529 aa9.14□□□□□ -0.95
SDCBP-206ENST00000519115 USP2O75604 605 aaPredicted RBP9.14□□□□□ -0.95
SDCBP-206ENST00000519115 MAP4K4O95819 1239 aaPredicted RBP9.14□□□□□ -0.95
SDCBP-206ENST00000519115 CHGBP05060 677 aa9.14□□□□□ -0.95
SDCBP-206ENST00000519115 HSPA1AP0DMV8 641 aaKnown RBP9.14□□□□□ -0.95
SDCBP-206ENST00000519115 HSPA1BP0DMV9 641 aaKnown RBP9.14□□□□□ -0.95
SDCBP-206ENST00000519115 SLURP2P0DP57 97 aa9.14□□□□□ -0.95
SDCBP-206ENST00000519115 IREB2P48200 963 aaKnown RBP9.14□□□□□ -0.95
SDCBP-206ENST00000519115 NOGQ13253 232 aa9.14□□□□□ -0.95
SDCBP-206ENST00000519115 MAP3K11Q16584 847 aa9.14□□□□□ -0.95
SDCBP-206ENST00000519115 LDLRAD1Q5T700 205 aa9.14□□□□□ -0.95
SDCBP-206ENST00000519115 SLC9C2Q5TAH2 1124 aa9.14□□□□□ -0.95
SDCBP-206ENST00000519115 CSRNP1Q96S65 589 aa9.14□□□□□ -0.95
SDCBP-206ENST00000519115 IDI2Q9BXS1 227 aa9.14□□□□□ -0.95
SDCBP-206ENST00000519115 TSHZ2Q9NRE2 1034 aa9.14□□□□□ -0.95
SDCBP-206ENST00000519115 PTPRFP10586 1907 aa9.13□□□□□ -0.95
SDCBP-206ENST00000519115 ZNF532Q9HCE3 1301 aa9.13□□□□□ -0.95
SDCBP-206ENST00000519115 CDC45O75419 566 aa9.13□□□□□ -0.95
SDCBP-206ENST00000519115 BAG3O95817 575 aa9.13□□□□□ -0.95
SDCBP-206ENST00000519115 PLCG2P16885 1265 aa9.13□□□□□ -0.95
SDCBP-206ENST00000519115 SLC4A8Q2Y0W8 1093 aa9.13□□□□□ -0.95
SDCBP-206ENST00000519115 LRRFIP1Q32MZ4 808 aaKnown RBP9.13□□□□□ -0.95
SDCBP-206ENST00000519115 DCAF15Q66K64 600 aa9.13□□□□□ -0.95
SDCBP-206ENST00000519115 SH3BP5LQ7L8J4 393 aa9.13□□□□□ -0.95
SDCBP-206ENST00000519115 MAPKAPK5Q8IW41 473 aa9.13□□□□□ -0.95
SDCBP-206ENST00000519115 PI4K2BQ8TCG2 481 aa9.13□□□□□ -0.95
SDCBP-206ENST00000519115 TGFBRAP1Q8WUH2 860 aa9.13□□□□□ -0.95
SDCBP-206ENST00000519115 CCDC102AQ96A19 550 aa9.13□□□□□ -0.95
SDCBP-206ENST00000519115 EVI5LQ96CN4 794 aa9.13□□□□□ -0.95
SDCBP-206ENST00000519115 WRNIP1Q96S55 665 aa9.13□□□□□ -0.95
SDCBP-206ENST00000519115 CASP8AP2Q9UKL3 1982 aa9.13□□□□□ -0.95
SDCBP-206ENST00000519115 ATRNL1Q5VV63 1379 aa9.12□□□□□ -0.95
SDCBP-206ENST00000519115 PHIPQ8WWQ0 1821 aa9.12□□□□□ -0.95
SDCBP-206ENST00000519115 FLT1P17948 1338 aa9.12□□□□□ -0.95
SDCBP-206ENST00000519115 MAGEB6P1A0A0J9YX57 407 aa9.12□□□□□ -0.95
SDCBP-206ENST00000519115 TCRBV5S4A2TA0A5A2 114 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms