RNA–Protein interactions for RNA: ENST00000518224.1

IGHV3-25-201, Transcript of immunoglobulin heavy variable 3-25 (pseudogene), humanhuman

BASIC

Gene IGHV3-25, Length 351 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-25-201ENST00000518224 CLASRPQ8N2M8 674 aaKnown RBP13.86□□□□□ -0.19
IGHV3-25-201ENST00000518224 OPTNQ96CV9 577 aa13.86□□□□□ -0.19
IGHV3-25-201ENST00000518224 IL1RAPL2Q9NP60 686 aa13.86□□□□□ -0.19
IGHV3-25-201ENST00000518224 RAI14Q9P0K7 980 aa13.86□□□□□ -0.19
IGHV3-25-201ENST00000518224 LRP2BPQ9P2M1 347 aa13.86□□□□□ -0.19
IGHV3-25-201ENST00000518224 IGF2BP3O00425 579 aaKnown RBP eCLIP13.85□□□□□ -0.19
IGHV3-25-201ENST00000518224 TBC1D12O60347 775 aa13.85□□□□□ -0.19
IGHV3-25-201ENST00000518224 MKRN3Q13064 507 aaKnown RBP13.85□□□□□ -0.19
IGHV3-25-201ENST00000518224 NAA16Q6N069 864 aaPredicted RBP13.85□□□□□ -0.19
IGHV3-25-201ENST00000518224 ADGRA1Q86SQ6 560 aa13.85□□□□□ -0.19
IGHV3-25-201ENST00000518224 ERO1BQ86YB8 467 aa13.85□□□□□ -0.19
IGHV3-25-201ENST00000518224 WRNIP1Q96S55 665 aa13.85□□□□□ -0.19
IGHV3-25-201ENST00000518224 PTPN18Q99952 460 aa13.85□□□□□ -0.19
IGHV3-25-201ENST00000518224 DCTPP1Q9H773 170 aa13.85□□□□□ -0.19
IGHV3-25-201ENST00000518224 ELP3Q9H9T3 547 aa13.85□□□□□ -0.19
IGHV3-25-201ENST00000518224 CSADQ9Y600 493 aa13.85□□□□□ -0.19
IGHV3-25-201ENST00000518224 DDTLA6NHG4 134 aaPredicted RBP13.84□□□□□ -0.19
IGHV3-25-201ENST00000518224 PPIL2Q13356 520 aa13.84□□□□□ -0.19
IGHV3-25-201ENST00000518224 MIGA2Q7L4E1 593 aa13.84□□□□□ -0.19
IGHV3-25-201ENST00000518224 METTL16Q86W50 562 aaKnown RBP13.84□□□□□ -0.19
IGHV3-25-201ENST00000518224 CNKSR2Q8WXI2 1034 aa13.84□□□□□ -0.19
IGHV3-25-201ENST00000518224 ZKSCAN4Q969J2 545 aaPredicted RBP13.84□□□□□ -0.19
IGHV3-25-201ENST00000518224 FOCADQ5VW36 1801 aa13.84□□□□□ -0.19
IGHV3-25-201ENST00000518224 CDK5RAP2Q96SN8 1893 aa13.83□□□□□ -0.2
IGHV3-25-201ENST00000518224 PLCG2P16885 1265 aa13.83□□□□□ -0.2
IGHV3-25-201ENST00000518224 INPP5BP32019 993 aa13.83□□□□□ -0.2
IGHV3-25-201ENST00000518224 GTF2A2P52657 109 aa13.83□□□□□ -0.2
IGHV3-25-201ENST00000518224 PPATQ06203 517 aa13.83□□□□□ -0.2
IGHV3-25-201ENST00000518224 BRI3BPQ8WY22 251 aa13.83□□□□□ -0.2
IGHV3-25-201ENST00000518224 OSBPL5Q9H0X9 879 aaPredicted RBP13.83□□□□□ -0.2
IGHV3-25-201ENST00000518224 R3HDMLQ9H3Y0 253 aa13.83□□□□□ -0.2
IGHV3-25-201ENST00000518224 ANTXR1Q9H6X2 564 aa13.83□□□□□ -0.2
IGHV3-25-201ENST00000518224 ZCCHC17Q9NP64 241 aaKnown RBP13.83□□□□□ -0.2
IGHV3-25-201ENST00000518224 KCNH4Q9UQ05 1017 aa13.83□□□□□ -0.2
IGHV3-25-201ENST00000518224 AK9Q5TCS8 1911 aa13.82□□□□□ -0.2
IGHV3-25-201ENST00000518224 CENPFP49454 3210 aa13.82□□□□□ -0.2
IGHV3-25-201ENST00000518224 BAG3O95817 575 aa13.82□□□□□ -0.2
IGHV3-25-201ENST00000518224 ATP5JP18859 108 aa13.82□□□□□ -0.2
IGHV3-25-201ENST00000518224 CERS3Q8IU89 383 aa13.82□□□□□ -0.2
IGHV3-25-201ENST00000518224 SH3RF3Q8TEJ3 882 aaPredicted RBP13.82□□□□□ -0.2
IGHV3-25-201ENST00000518224 PCDHB15Q9Y5E8 787 aa13.82□□□□□ -0.2
IGHV3-25-201ENST00000518224 SIPA1L1O43166 1804 aa13.81□□□□□ -0.2
IGHV3-25-201ENST00000518224 GPR25O00155 361 aa13.81□□□□□ -0.2
IGHV3-25-201ENST00000518224 IRF6O14896 467 aa13.81□□□□□ -0.2
IGHV3-25-201ENST00000518224 TBC1D8O95759 1140 aa13.81□□□□□ -0.2
IGHV3-25-201ENST00000518224 IFIT2P09913 472 aaKnown RBP13.81□□□□□ -0.2
IGHV3-25-201ENST00000518224 TTF1Q15361 905 aaPredicted RBP13.81□□□□□ -0.2
IGHV3-25-201ENST00000518224 TEX11Q8IYF3 940 aa13.81□□□□□ -0.2
IGHV3-25-201ENST00000518224 ZNF296Q8WUU4 475 aaPredicted RBP13.81□□□□□ -0.2
IGHV3-25-201ENST00000518224 OTUD5Q96G74 571 aa13.81□□□□□ -0.2
IGHV3-25-201ENST00000518224 LRRCC1Q9C099 1032 aa13.81□□□□□ -0.2
IGHV3-25-201ENST00000518224 NDUFB9Q9Y6M9 179 aa13.81□□□□□ -0.2
IGHV3-25-201ENST00000518224 CTNND1O60716 968 aaKnown RBP13.8□□□□□ -0.2
IGHV3-25-201ENST00000518224 MAP3K12Q12852 859 aa13.8□□□□□ -0.2
IGHV3-25-201ENST00000518224 MOGSQ13724 837 aa13.8□□□□□ -0.2
IGHV3-25-201ENST00000518224 OTUD7BQ6GQQ9 843 aa13.8□□□□□ -0.2
IGHV3-25-201ENST00000518224 SCYL3Q8IZE3 742 aa13.8□□□□□ -0.2
IGHV3-25-201ENST00000518224 DHX36Q9H2U1 1008 aaKnown RBP13.8□□□□□ -0.2
IGHV3-25-201ENST00000518224 AATFQ9NY61 560 aaKnown RBP eCLIP13.8□□□□□ -0.2
IGHV3-25-201ENST00000518224 PHIPQ8WWQ0 1821 aa13.79□□□□□ -0.2
IGHV3-25-201ENST00000518224 CCL15-CCL14A0A0B4J2E2 113 aa13.79□□□□□ -0.2
IGHV3-25-201ENST00000518224 TCRBV5S4A2TA0A5A2 114 aa13.79□□□□□ -0.2
IGHV3-25-201ENST00000518224 IDH1O75874 414 aaKnown RBP13.79□□□□□ -0.2
IGHV3-25-201ENST00000518224 CETPP11597 493 aa13.79□□□□□ -0.2
IGHV3-25-201ENST00000518224 CYP7A1P22680 504 aa13.79□□□□□ -0.2
IGHV3-25-201ENST00000518224 SNAPC2Q13487 334 aa13.79□□□□□ -0.2
IGHV3-25-201ENST00000518224 PICALMQ13492 652 aa13.79□□□□□ -0.2
IGHV3-25-201ENST00000518224 AAMPQ13685 434 aa13.79□□□□□ -0.2
IGHV3-25-201ENST00000518224 CCL15Q16663 113 aa13.79□□□□□ -0.2
IGHV3-25-201ENST00000518224 ABHD8Q96I13 439 aa13.79□□□□□ -0.2
IGHV3-25-201ENST00000518224 HAUS7Q99871 368 aa13.79□□□□□ -0.2
IGHV3-25-201ENST00000518224 RIOK1Q9BRS2 568 aaKnown RBP13.79□□□□□ -0.2
IGHV3-25-201ENST00000518224 NOL10Q9BSC4 688 aaKnown RBP13.79□□□□□ -0.2
IGHV3-25-201ENST00000518224 MCOLN1Q9GZU1 580 aa13.79□□□□□ -0.2
IGHV3-25-201ENST00000518224 HERC5Q9UII4 1024 aaKnown RBP13.79□□□□□ -0.2
IGHV3-25-201ENST00000518224 FLT1P17948 1338 aa13.79□□□□□ -0.2
IGHV3-25-201ENST00000518224 DOCK1Q14185 1865 aa13.78□□□□□ -0.2
IGHV3-25-201ENST00000518224 APBB1O00213 710 aa13.78□□□□□ -0.2
IGHV3-25-201ENST00000518224 CXCL11O14625 94 aa13.78□□□□□ -0.2
IGHV3-25-201ENST00000518224 SLURP2P0DP57 97 aa13.78□□□□□ -0.2
IGHV3-25-201ENST00000518224 PTPRAP18433 802 aa13.78□□□□□ -0.2
IGHV3-25-201ENST00000518224 CRHR2Q13324 411 aa13.78□□□□□ -0.2
IGHV3-25-201ENST00000518224 CTU1Q7Z7A3 348 aaKnown RBP13.78□□□□□ -0.2
IGHV3-25-201ENST00000518224 ZSCAN29Q8IWY8 852 aaPredicted RBP13.78□□□□□ -0.2
IGHV3-25-201ENST00000518224 FAM43AQ8N2R8 423 aa13.78□□□□□ -0.2
IGHV3-25-201ENST00000518224 MAGEB6Q8N7X4 407 aa13.78□□□□□ -0.2
IGHV3-25-201ENST00000518224 PI4KBQ9UBF8 816 aa13.78□□□□□ -0.2
IGHV3-25-201ENST00000518224 DDX60LQ5H9U9 1706 aaKnown RBP13.78□□□□□ -0.2
IGHV3-25-201ENST00000518224 BTBD19C9JJ37 291 aa13.77□□□□□ -0.21
IGHV3-25-201ENST00000518224 FKTNO75072 461 aa13.77□□□□□ -0.21
IGHV3-25-201ENST00000518224 PTPRFP10586 1907 aa13.77□□□□□ -0.21
IGHV3-25-201ENST00000518224 PDE6AP16499 860 aa13.77□□□□□ -0.21
IGHV3-25-201ENST00000518224 DYNLL1P63167 89 aaKnown RBP13.77□□□□□ -0.21
IGHV3-25-201ENST00000518224 YTHDC1Q96MU7 727 aaKnown RBP13.77□□□□□ -0.21
IGHV3-25-201ENST00000518224 DNAJC18Q9H819 358 aa13.77□□□□□ -0.21
IGHV3-25-201ENST00000518224 AFG3L2Q9Y4W6 797 aa13.77□□□□□ -0.21
IGHV3-25-201ENST00000518224 ADGRA2Q96PE1 1338 aa13.76□□□□□ -0.21
IGHV3-25-201ENST00000518224 A0A0G2JLL6 359 aaPredicted RBP13.76□□□□□ -0.21
IGHV3-25-201ENST00000518224 GOLIM4O00461 696 aa13.76□□□□□ -0.21
IGHV3-25-201ENST00000518224 SMARCA5O60264 1052 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms