RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 DZIP1Q86YF9 867 aaKnown RBP12.57□□□□□ -0.4
SPIDR-204ENST00000517824 LCORLQ8N3X6 602 aa12.57□□□□□ -0.4
SPIDR-204ENST00000517824 ZNF526Q8TF50 670 aaPredicted RBP12.57□□□□□ -0.4
SPIDR-204ENST00000517824 NUP62CLQ9H1M0 184 aa12.57□□□□□ -0.4
SPIDR-204ENST00000517824 GPBP1L1Q9HC44 474 aaPredicted RBP12.57□□□□□ -0.4
SPIDR-204ENST00000517824 ORC3Q9UBD5 711 aaPredicted RBP12.57□□□□□ -0.4
SPIDR-204ENST00000517824 COL1A1P02452 1464 aaPredicted RBP12.57□□□□□ -0.4
SPIDR-204ENST00000517824 NEDD4P46934 1319 aa12.57□□□□□ -0.4
SPIDR-204ENST00000517824 FOCADQ5VW36 1801 aa12.56□□□□□ -0.4
SPIDR-204ENST00000517824 SH2B2O14492 632 aaPredicted RBP12.56□□□□□ -0.4
SPIDR-204ENST00000517824 FOXP2O15409 715 aa12.56□□□□□ -0.4
SPIDR-204ENST00000517824 DTNBO60941 627 aa12.56□□□□□ -0.4
SPIDR-204ENST00000517824 CTDSPL2Q05D32 466 aa12.56□□□□□ -0.4
SPIDR-204ENST00000517824 GRAPQ13588 217 aa12.56□□□□□ -0.4
SPIDR-204ENST00000517824 CCDC73Q6ZRK6 1079 aa12.56□□□□□ -0.4
SPIDR-204ENST00000517824 MICU3Q86XE3 530 aa12.56□□□□□ -0.4
SPIDR-204ENST00000517824 AMOTL1Q8IY63 956 aa12.56□□□□□ -0.4
SPIDR-204ENST00000517824 FAM43AQ8N2R8 423 aa12.56□□□□□ -0.4
SPIDR-204ENST00000517824 GRAPLQ8TC17 118 aaPredicted RBP12.56□□□□□ -0.4
SPIDR-204ENST00000517824 WASF1Q92558 559 aa12.56□□□□□ -0.4
SPIDR-204ENST00000517824 CRNKL1Q9BZJ0 848 aaKnown RBP12.56□□□□□ -0.4
SPIDR-204ENST00000517824 DDX19AQ9NUU7 478 aaKnown RBP12.56□□□□□ -0.4
SPIDR-204ENST00000517824 NSFL1CQ9UNZ2 370 aaKnown RBP12.56□□□□□ -0.4
SPIDR-204ENST00000517824 SLC12A7Q9Y666 1083 aa12.56□□□□□ -0.4
SPIDR-204ENST00000517824 ANKRD31Q8N7Z5 1873 aa12.56□□□□□ -0.4
SPIDR-204ENST00000517824 MINDY4BA8MYZ0 360 aa12.55□□□□□ -0.4
SPIDR-204ENST00000517824 KDM4AO75164 1064 aa12.55□□□□□ -0.4
SPIDR-204ENST00000517824 MMP10P09238 476 aa12.55□□□□□ -0.4
SPIDR-204ENST00000517824 EVCP57679 992 aa12.55□□□□□ -0.4
SPIDR-204ENST00000517824 ANTXR2P58335 489 aa12.55□□□□□ -0.4
SPIDR-204ENST00000517824 GSTO1P78417 241 aa12.55□□□□□ -0.4
SPIDR-204ENST00000517824 PPARAQ07869 468 aa12.55□□□□□ -0.4
SPIDR-204ENST00000517824 NFIXQ14938 502 aa12.55□□□□□ -0.4
SPIDR-204ENST00000517824 WTAPQ15007 396 aa12.55□□□□□ -0.4
SPIDR-204ENST00000517824 TRIM22Q8IYM9 498 aa12.55□□□□□ -0.4
SPIDR-204ENST00000517824 LEO1Q8WVC0 666 aaPredicted RBP12.55□□□□□ -0.4
SPIDR-204ENST00000517824 STAG1Q8WVM7 1258 aa12.55□□□□□ -0.4
SPIDR-204ENST00000517824 ESR2Q92731 530 aa12.55□□□□□ -0.4
SPIDR-204ENST00000517824 RBM17Q96I25 401 aaKnown RBP12.55□□□□□ -0.4
SPIDR-204ENST00000517824 XDHP47989 1333 aa12.55□□□□□ -0.4
SPIDR-204ENST00000517824 SALL1Q9NSC2 1324 aa12.55□□□□□ -0.4
SPIDR-204ENST00000517824 CCDC196A0A1B0GTZ2 297 aa12.54□□□□□ -0.4
SPIDR-204ENST00000517824 GSG1L2A8MUP6 293 aa12.54□□□□□ -0.4
SPIDR-204ENST00000517824 PTMAP06454 111 aaKnown RBP12.54□□□□□ -0.4
SPIDR-204ENST00000517824 CCDC192P0DO97 292 aa12.54□□□□□ -0.4
SPIDR-204ENST00000517824 GUCY1B3Q02153 619 aa12.54□□□□□ -0.4
SPIDR-204ENST00000517824 SF3A1Q15459 793 aaKnown RBP12.54□□□□□ -0.4
SPIDR-204ENST00000517824 MAP3K11Q16584 847 aa12.54□□□□□ -0.4
SPIDR-204ENST00000517824 BRAPQ7Z569 592 aa12.54□□□□□ -0.4
SPIDR-204ENST00000517824 TTC6Q86TZ1 520 aa12.54□□□□□ -0.4
SPIDR-204ENST00000517824 RAB11FIP4Q86YS3 637 aa12.54□□□□□ -0.4
SPIDR-204ENST00000517824 CCDC24Q8N4L8 307 aa12.54□□□□□ -0.4
SPIDR-204ENST00000517824 RBSNQ9H1K0 784 aa12.54□□□□□ -0.4
SPIDR-204ENST00000517824 TNMDQ9H2S6 317 aa12.54□□□□□ -0.4
SPIDR-204ENST00000517824 EPB41L4AQ9HCS5 686 aaPredicted RBP12.54□□□□□ -0.4
SPIDR-204ENST00000517824 TFIP11Q9UBB9 837 aaKnown RBP12.54□□□□□ -0.4
SPIDR-204ENST00000517824 LEMD3Q9Y2U8 911 aa12.54□□□□□ -0.4
SPIDR-204ENST00000517824 IGSF3O75054 1194 aa12.53□□□□□ -0.4
SPIDR-204ENST00000517824 CTDNEP1O95476 244 aa12.53□□□□□ -0.4
SPIDR-204ENST00000517824 PCP11498 1178 aaKnown RBP12.53□□□□□ -0.4
SPIDR-204ENST00000517824 SSRP1Q08945 709 aaKnown RBP12.53□□□□□ -0.4
SPIDR-204ENST00000517824 STK38Q15208 465 aa12.53□□□□□ -0.4
SPIDR-204ENST00000517824 SAFBQ15424 915 aaKnown RBP eCLIP12.53□□□□□ -0.4
SPIDR-204ENST00000517824 APOA5Q6Q788 366 aa12.53□□□□□ -0.4
SPIDR-204ENST00000517824 CYB5R4Q7L1T6 521 aa12.53□□□□□ -0.4
SPIDR-204ENST00000517824 TMTC2Q8N394 836 aa12.53□□□□□ -0.4
SPIDR-204ENST00000517824 RNF214Q8ND24 703 aa12.53□□□□□ -0.4
SPIDR-204ENST00000517824 WDR66Q8TBY9 1149 aa12.53□□□□□ -0.4
SPIDR-204ENST00000517824 FAM84BQ96KN1 310 aaPredicted RBP12.53□□□□□ -0.4
SPIDR-204ENST00000517824 MTA3Q9BTC8 594 aa12.53□□□□□ -0.4
SPIDR-204ENST00000517824 BRIP1Q9BX63 1249 aa12.53□□□□□ -0.4
SPIDR-204ENST00000517824 NBPF3Q9H094 633 aa12.53□□□□□ -0.4
SPIDR-204ENST00000517824 TMX4Q9H1E5 349 aaPredicted RBP12.53□□□□□ -0.4
SPIDR-204ENST00000517824 RTN4Q9NQC3 1192 aaKnown RBP12.53□□□□□ -0.4
SPIDR-204ENST00000517824 GPHNQ9NQX3 736 aaPredicted RBP12.53□□□□□ -0.4
SPIDR-204ENST00000517824 PCNTO95613 3336 aa12.53□□□□□ -0.4
SPIDR-204ENST00000517824 KIF3CO14782 793 aa12.52□□□□□ -0.41
SPIDR-204ENST00000517824 PRKAB2O43741 272 aa12.52□□□□□ -0.41
SPIDR-204ENST00000517824 LDHBP07195 334 aaKnown RBP12.52□□□□□ -0.41
SPIDR-204ENST00000517824 HSPA6P17066 643 aa12.52□□□□□ -0.41
SPIDR-204ENST00000517824 IARSP41252 1262 aaKnown RBP12.52□□□□□ -0.41
SPIDR-204ENST00000517824 LIFRP42702 1097 aa12.52□□□□□ -0.41
SPIDR-204ENST00000517824 ME1P48163 572 aa12.52□□□□□ -0.41
SPIDR-204ENST00000517824 AKAP17AQ02040 695 aaKnown RBP12.52□□□□□ -0.41
SPIDR-204ENST00000517824 CEBPZQ03701 1054 aaKnown RBP12.52□□□□□ -0.41
SPIDR-204ENST00000517824 ZRSR1Q15695 479 aaKnown RBP12.52□□□□□ -0.41
SPIDR-204ENST00000517824 RTN1Q16799 776 aa12.52□□□□□ -0.41
SPIDR-204ENST00000517824 FAM173BQ6P4H8 233 aa12.52□□□□□ -0.41
SPIDR-204ENST00000517824 FBXO33Q7Z6M2 555 aa12.52□□□□□ -0.41
SPIDR-204ENST00000517824 IQCA1Q86XH1 822 aa12.52□□□□□ -0.41
SPIDR-204ENST00000517824 ALG1Q9BT22 464 aa12.52□□□□□ -0.41
SPIDR-204ENST00000517824 TAOK2Q9UL54 1235 aa12.52□□□□□ -0.41
SPIDR-204ENST00000517824 STK36Q9NRP7 1315 aa12.52□□□□□ -0.41
SPIDR-204ENST00000517824 KINO60870 393 aaKnown RBP12.51□□□□□ -0.41
SPIDR-204ENST00000517824 UFL1O94874 794 aa12.51□□□□□ -0.41
SPIDR-204ENST00000517824 SERPINB2P05120 415 aa12.51□□□□□ -0.41
SPIDR-204ENST00000517824 LDHCP07864 332 aa12.51□□□□□ -0.41
SPIDR-204ENST00000517824 UVSSAQ2YD98 709 aa12.51□□□□□ -0.41
SPIDR-204ENST00000517824 PRR5LQ6MZQ0 368 aa12.51□□□□□ -0.41
SPIDR-204ENST00000517824 GIMAP6Q6P9H5 292 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms