RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 CRACR2AQ9BSW2 395 aa12.31□□□□□ -0.44
PCDHGA1-202ENST00000517417 RTCBQ9Y3I0 505 aaKnown RBP12.31□□□□□ -0.44
PCDHGA1-202ENST00000517417 SAMM50Q9Y512 469 aa12.31□□□□□ -0.44
PCDHGA1-202ENST00000517417 PTPRUQ92729 1446 aa12.31□□□□□ -0.44
PCDHGA1-202ENST00000517417 NEURL1BA8MQ27 555 aa12.3□□□□□ -0.44
PCDHGA1-202ENST00000517417 NSUN7Q8NE18 718 aaKnown RBP12.3□□□□□ -0.44
PCDHGA1-202ENST00000517417 ZBTB9Q96C00 473 aa12.3□□□□□ -0.44
PCDHGA1-202ENST00000517417 SLC52A2Q9HAB3 445 aa12.3□□□□□ -0.44
PCDHGA1-202ENST00000517417 PRAMEF22A3QJZ6 481 aa12.3□□□□□ -0.44
PCDHGA1-202ENST00000517417 TRIM75PA6NK02 468 aa12.3□□□□□ -0.44
PCDHGA1-202ENST00000517417 FBXO38Q6PIJ6 1188 aa12.3□□□□□ -0.44
PCDHGA1-202ENST00000517417 DNAJC10Q8IXB1 793 aa12.3□□□□□ -0.44
PCDHGA1-202ENST00000517417 ZFP91Q96JP5 570 aaPredicted RBP12.3□□□□□ -0.44
PCDHGA1-202ENST00000517417 FGFR1OPO95684 399 aaKnown RBP12.3□□□□□ -0.44
PCDHGA1-202ENST00000517417 USP8P40818 1118 aa12.3□□□□□ -0.44
PCDHGA1-202ENST00000517417 NDUFA8P51970 172 aa12.3□□□□□ -0.44
PCDHGA1-202ENST00000517417 PPP1R13BQ96KQ4 1090 aa12.3□□□□□ -0.44
PCDHGA1-202ENST00000517417 ZC3H12CQ9C0D7 883 aaKnown RBP12.3□□□□□ -0.44
PCDHGA1-202ENST00000517417 DBNLQ9UJU6 430 aaKnown RBP12.3□□□□□ -0.44
PCDHGA1-202ENST00000517417 RCOR1Q9UKL0 485 aa12.3□□□□□ -0.44
PCDHGA1-202ENST00000517417 B4E1Z4 1266 aa12.3□□□□□ -0.44
PCDHGA1-202ENST00000517417 GSTO1P78417 241 aa12.3□□□□□ -0.44
PCDHGA1-202ENST00000517417 SETD1AO15047 1707 aaKnown RBP12.29□□□□□ -0.44
PCDHGA1-202ENST00000517417 UBR1Q8IWV7 1749 aa12.29□□□□□ -0.44
PCDHGA1-202ENST00000517417 CTIFO43310 598 aaKnown RBP12.29□□□□□ -0.44
PCDHGA1-202ENST00000517417 CCDC178Q5BJE1 867 aa12.29□□□□□ -0.44
PCDHGA1-202ENST00000517417 SARM1Q6SZW1 724 aa12.29□□□□□ -0.44
PCDHGA1-202ENST00000517417 RIMBP2O15034 1052 aa12.29□□□□□ -0.44
PCDHGA1-202ENST00000517417 GOLGA1Q92805 767 aa12.29□□□□□ -0.44
PCDHGA1-202ENST00000517417 MYO1BO43795 1136 aa12.29□□□□□ -0.44
PCDHGA1-202ENST00000517417 PRDM1O75626 825 aa12.29□□□□□ -0.44
PCDHGA1-202ENST00000517417 TRIM21P19474 475 aaKnown RBP12.29□□□□□ -0.44
PCDHGA1-202ENST00000517417 STAT6P42226 847 aa12.29□□□□□ -0.44
PCDHGA1-202ENST00000517417 NAPAP54920 295 aa12.29□□□□□ -0.44
PCDHGA1-202ENST00000517417 STX17P56962 302 aa12.29□□□□□ -0.44
PCDHGA1-202ENST00000517417 MTX1Q13505 466 aa12.29□□□□□ -0.44
PCDHGA1-202ENST00000517417 MCM6Q14566 821 aa12.29□□□□□ -0.44
PCDHGA1-202ENST00000517417 DPCR1Q3MIW9 517 aa12.29□□□□□ -0.44
PCDHGA1-202ENST00000517417 VPS36Q86VN1 386 aa12.29□□□□□ -0.44
PCDHGA1-202ENST00000517417 BAG1Q99933 345 aaPredicted RBP12.29□□□□□ -0.44
PCDHGA1-202ENST00000517417 GBP3Q9H0R5 595 aa12.29□□□□□ -0.44
PCDHGA1-202ENST00000517417 SH3TC1Q8TE82 1336 aa12.28□□□□□ -0.44
PCDHGA1-202ENST00000517417 GNPATO15228 680 aa12.28□□□□□ -0.44
PCDHGA1-202ENST00000517417 USO1O60763 962 aaKnown RBP12.28□□□□□ -0.44
PCDHGA1-202ENST00000517417 TTLL12Q14166 644 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA1-202ENST00000517417 DHX37Q8IY37 1157 aaKnown RBP12.28□□□□□ -0.44
PCDHGA1-202ENST00000517417 XAGE2Q96GT9 111 aa12.28□□□□□ -0.44
PCDHGA1-202ENST00000517417 PPP2R3AQ06190 1150 aa12.28□□□□□ -0.44
PCDHGA1-202ENST00000517417 CCDC191Q8NCU4 936 aa12.28□□□□□ -0.44
PCDHGA1-202ENST00000517417 RNF216Q9NWF9 866 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA1-202ENST00000517417 MACROD2A1Z1Q3 448 aa12.28□□□□□ -0.44
PCDHGA1-202ENST00000517417 ANKRD62A6NC57 917 aa12.28□□□□□ -0.44
PCDHGA1-202ENST00000517417 MYSM1Q5VVJ2 828 aa12.28□□□□□ -0.44
PCDHGA1-202ENST00000517417 SCLT1Q96NL6 688 aa12.28□□□□□ -0.44
PCDHGA1-202ENST00000517417 DSCC1Q9BVC3 393 aa12.28□□□□□ -0.44
PCDHGA1-202ENST00000517417 CLIC4Q9Y696 253 aa12.28□□□□□ -0.44
PCDHGA1-202ENST00000517417 PAFAH1B1P43034 410 aa12.28□□□□□ -0.44
PCDHGA1-202ENST00000517417 GOLPH3LQ9H4A5 285 aa12.28□□□□□ -0.44
PCDHGA1-202ENST00000517417 TFCP2L1Q9NZI6 479 aa12.28□□□□□ -0.44
PCDHGA1-202ENST00000517417 USP42Q9H9J4 1324 aaKnown RBP12.27□□□□□ -0.44
PCDHGA1-202ENST00000517417 AKR1B10O60218 316 aa12.27□□□□□ -0.44
PCDHGA1-202ENST00000517417 PFKFB1P16118 471 aa12.27□□□□□ -0.44
PCDHGA1-202ENST00000517417 ETF1P62495 437 aaKnown RBP12.27□□□□□ -0.44
PCDHGA1-202ENST00000517417 KMT5BQ4FZB7 885 aa12.27□□□□□ -0.44
PCDHGA1-202ENST00000517417 PLIN2Q99541 437 aa12.27□□□□□ -0.44
PCDHGA1-202ENST00000517417 HAUS7Q99871 368 aa12.27□□□□□ -0.44
PCDHGA1-202ENST00000517417 LZTFL1Q9NQ48 299 aa12.27□□□□□ -0.44
PCDHGA1-202ENST00000517417 PSDA5PKW4 1024 aaPredicted RBP12.27□□□□□ -0.45
PCDHGA1-202ENST00000517417 POTEB2H3BUK9 544 aa12.27□□□□□ -0.45
PCDHGA1-202ENST00000517417 ZNF274Q96GC6 653 aaPredicted RBP12.27□□□□□ -0.45
PCDHGA1-202ENST00000517417 MMRN2Q9H8L6 949 aa12.27□□□□□ -0.45
PCDHGA1-202ENST00000517417 EXOC1Q9NV70 894 aa12.27□□□□□ -0.45
PCDHGA1-202ENST00000517417 CCDC175P0C221 793 aa12.27□□□□□ -0.45
PCDHGA1-202ENST00000517417 PDIA3P30101 505 aaKnown RBP12.27□□□□□ -0.45
PCDHGA1-202ENST00000517417 GNAQP50148 359 aa12.27□□□□□ -0.45
PCDHGA1-202ENST00000517417 SEPT7Q16181 437 aaKnown RBP12.27□□□□□ -0.45
PCDHGA1-202ENST00000517417 PUF60Q9UHX1 559 aaKnown RBP12.27□□□□□ -0.45
PCDHGA1-202ENST00000517417 OVOS2A0A0J9YW53 1432 aa12.27□□□□□ -0.45
PCDHGA1-202ENST00000517417 TECPR2O15040 1411 aa12.27□□□□□ -0.45
PCDHGA1-202ENST00000517417 OVOS2Q6IE36 1432 aa12.27□□□□□ -0.45
PCDHGA1-202ENST00000517417 NOP2P46087 812 aaKnown RBP12.26□□□□□ -0.45
PCDHGA1-202ENST00000517417 TERF2Q15554 542 aa12.26□□□□□ -0.45
PCDHGA1-202ENST00000517417 ARMT1Q9H993 441 aa12.26□□□□□ -0.45
PCDHGA1-202ENST00000517417 TMCO5BA8MYB1 307 aa12.26□□□□□ -0.45
PCDHGA1-202ENST00000517417 GNAT2P19087 354 aa12.26□□□□□ -0.45
PCDHGA1-202ENST00000517417 MCM7P33993 719 aa12.26□□□□□ -0.45
PCDHGA1-202ENST00000517417 ZNF335Q9H4Z2 1342 aaPredicted RBP12.26□□□□□ -0.45
PCDHGA1-202ENST00000517417 USP31Q70CQ4 1352 aa12.26□□□□□ -0.45
PCDHGA1-202ENST00000517417 GPAA1O43292 621 aa12.26□□□□□ -0.45
PCDHGA1-202ENST00000517417 LDHBP07195 334 aaKnown RBP12.26□□□□□ -0.45
PCDHGA1-202ENST00000517417 SYCP3Q8IZU3 236 aa12.26□□□□□ -0.45
PCDHGA1-202ENST00000517417 JADE2Q9NQC1 790 aa12.26□□□□□ -0.45
PCDHGA1-202ENST00000517417 HSPD1P10809 573 aaKnown RBP12.26□□□□□ -0.45
PCDHGA1-202ENST00000517417 ASIC1P78348 528 aa12.26□□□□□ -0.45
PCDHGA1-202ENST00000517417 PNOCQ13519 176 aa12.26□□□□□ -0.45
PCDHGA1-202ENST00000517417 KRBA2Q6ZNG9 492 aa12.26□□□□□ -0.45
PCDHGA1-202ENST00000517417 ZNF804AQ7Z570 1209 aa12.26□□□□□ -0.45
PCDHGA1-202ENST00000517417 NYXQ9GZU5 481 aa12.26□□□□□ -0.45
PCDHGA1-202ENST00000517417 RTEL1Q9NZ71 1219 aa12.26□□□□□ -0.45
PCDHGA1-202ENST00000517417 NRKQ7Z2Y5 1582 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms