RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 PHF20L1A8MW92 1017 aa18.04■□□□□ 0.48
SCARNA20.5-201ENST00000516991 MAP4K4O95819 1239 aaPredicted RBP18.04■□□□□ 0.48
SCARNA20.5-201ENST00000516991 GNAI2P04899 355 aa18.04■□□□□ 0.48
SCARNA20.5-201ENST00000516991 BTDP43251 543 aa18.04■□□□□ 0.48
SCARNA20.5-201ENST00000516991 MOGSQ13724 837 aa18.04■□□□□ 0.48
SCARNA20.5-201ENST00000516991 ERICH6Q7L0X2 663 aa18.04■□□□□ 0.48
SCARNA20.5-201ENST00000516991 FASTKD5Q7L8L6 764 aaKnown RBP18.04■□□□□ 0.48
SCARNA20.5-201ENST00000516991 ZFPM1Q8IX07 1006 aa18.04■□□□□ 0.48
SCARNA20.5-201ENST00000516991 PTPRFP10586 1907 aa18.04■□□□□ 0.48
SCARNA20.5-201ENST00000516991 MKI67P46013 3256 aaKnown RBP18.03■□□□□ 0.48
SCARNA20.5-201ENST00000516991 NPM3O75607 178 aaKnown RBP18.03■□□□□ 0.48
SCARNA20.5-201ENST00000516991 TRIM27P14373 513 aa18.03■□□□□ 0.48
SCARNA20.5-201ENST00000516991 PSMC4P43686 418 aa18.03■□□□□ 0.48
SCARNA20.5-201ENST00000516991 GSTO1P78417 241 aa18.03■□□□□ 0.48
SCARNA20.5-201ENST00000516991 MAP3K10Q02779 954 aa18.03■□□□□ 0.48
SCARNA20.5-201ENST00000516991 GORABQ5T7V8 394 aa18.03■□□□□ 0.48
SCARNA20.5-201ENST00000516991 ATF7IPQ6VMQ6 1270 aa18.03■□□□□ 0.48
SCARNA20.5-201ENST00000516991 SH3TC2Q8TF17 1288 aa18.03■□□□□ 0.48
SCARNA20.5-201ENST00000516991 SRRDQ9UH36 339 aa18.03■□□□□ 0.48
SCARNA20.5-201ENST00000516991 COL2A1P02458 1487 aaPredicted RBP18.02■□□□□ 0.48
SCARNA20.5-201ENST00000516991 GPR75-ASB3A0A0A6YYF3 556 aa18.02■□□□□ 0.48
SCARNA20.5-201ENST00000516991 A0A0G2JLL6 359 aaPredicted RBP18.02■□□□□ 0.48
SCARNA20.5-201ENST00000516991 CTNND1O60716 968 aaKnown RBP18.02■□□□□ 0.48
SCARNA20.5-201ENST00000516991 LDHCP07864 332 aa18.02■□□□□ 0.48
SCARNA20.5-201ENST00000516991 PTPRAP18433 802 aa18.02■□□□□ 0.48
SCARNA20.5-201ENST00000516991 MECOMQ03112 1051 aa18.02■□□□□ 0.48
SCARNA20.5-201ENST00000516991 SH3BP5LQ7L8J4 393 aa18.02■□□□□ 0.48
SCARNA20.5-201ENST00000516991 PRRT2Q7Z6L0 340 aaPredicted RBP18.02■□□□□ 0.48
SCARNA20.5-201ENST00000516991 TRIM47Q96LD4 638 aa18.02■□□□□ 0.48
SCARNA20.5-201ENST00000516991 NEUROD6Q96NK8 337 aa18.02■□□□□ 0.48
SCARNA20.5-201ENST00000516991 SLC45A1Q9Y2W3 748 aa18.02■□□□□ 0.48
SCARNA20.5-201ENST00000516991 FMNL1O95466 1100 aaPredicted RBP18.01■□□□□ 0.47
SCARNA20.5-201ENST00000516991 OSBPP22059 807 aa18.01■□□□□ 0.47
SCARNA20.5-201ENST00000516991 ARID4AP29374 1257 aaPredicted RBP18.01■□□□□ 0.47
SCARNA20.5-201ENST00000516991 PICALMQ13492 652 aa18.01■□□□□ 0.47
SCARNA20.5-201ENST00000516991 GPAT2Q6NUI2 795 aa18.01■□□□□ 0.47
SCARNA20.5-201ENST00000516991 SPATA5Q8NB90 893 aa18.01■□□□□ 0.47
SCARNA20.5-201ENST00000516991 RAET1EQ8TD07 263 aa18.01■□□□□ 0.47
SCARNA20.5-201ENST00000516991 DDX4Q9NQI0 724 aaKnown RBP18.01■□□□□ 0.47
SCARNA20.5-201ENST00000516991 HMG20BQ9P0W2 317 aa18.01■□□□□ 0.47
SCARNA20.5-201ENST00000516991 ZHX2Q9Y6X8 837 aa18.01■□□□□ 0.47
SCARNA20.5-201ENST00000516991 MGAMO43451 1857 aa18.01■□□□□ 0.47
SCARNA20.5-201ENST00000516991 MYPNQ86TC9 1320 aa18■□□□□ 0.47
SCARNA20.5-201ENST00000516991 PHIPQ8WWQ0 1821 aa18■□□□□ 0.47
SCARNA20.5-201ENST00000516991 MAST2Q6P0Q8 1798 aa18■□□□□ 0.47
SCARNA20.5-201ENST00000516991 DDTLA6NHG4 134 aaPredicted RBP18■□□□□ 0.47
SCARNA20.5-201ENST00000516991 UQCRFS1P1P0C7P4 283 aa18■□□□□ 0.47
SCARNA20.5-201ENST00000516991 BCRP11274 1271 aa18■□□□□ 0.47
SCARNA20.5-201ENST00000516991 FCGRTP55899 365 aa18■□□□□ 0.47
SCARNA20.5-201ENST00000516991 RHBDL3P58872 404 aa18■□□□□ 0.47
SCARNA20.5-201ENST00000516991 G3BP1Q13283 466 aaKnown RBP eCLIP18■□□□□ 0.47
SCARNA20.5-201ENST00000516991 FRAT1Q92837 279 aaPredicted RBP18■□□□□ 0.47
SCARNA20.5-201ENST00000516991 AFG3L2Q9Y4W6 797 aa18■□□□□ 0.47
SCARNA20.5-201ENST00000516991 BRCA2P51587 3418 aa17.99■□□□□ 0.47
SCARNA20.5-201ENST00000516991 TBC1D12O60347 775 aa17.99■□□□□ 0.47
SCARNA20.5-201ENST00000516991 CTGFP29279 349 aa17.99■□□□□ 0.47
SCARNA20.5-201ENST00000516991 GRK4P32298 578 aa17.99■□□□□ 0.47
SCARNA20.5-201ENST00000516991 GADL1Q6ZQY3 521 aa17.99■□□□□ 0.47
SCARNA20.5-201ENST00000516991 MYCP01106 439 aaPredicted RBP17.98■□□□□ 0.47
SCARNA20.5-201ENST00000516991 CYP2C8P10632 490 aa17.98■□□□□ 0.47
SCARNA20.5-201ENST00000516991 NKX2-3Q8TAU0 364 aa17.98■□□□□ 0.47
SCARNA20.5-201ENST00000516991 NSUN4Q96CB9 384 aaKnown RBP17.98■□□□□ 0.47
SCARNA20.5-201ENST00000516991 NOL10Q9BSC4 688 aaKnown RBP17.98■□□□□ 0.47
SCARNA20.5-201ENST00000516991 TBC1D2Q9BYX2 928 aa17.98■□□□□ 0.47
SCARNA20.5-201ENST00000516991 RAI14Q9P0K7 980 aa17.98■□□□□ 0.47
SCARNA20.5-201ENST00000516991 PNMA6EA0A0J9YXQ4 647 aa17.97■□□□□ 0.47
SCARNA20.5-201ENST00000516991 HABP4Q5JVS0 413 aaKnown RBP17.97■□□□□ 0.47
SCARNA20.5-201ENST00000516991 PI16Q6UXB8 463 aa17.97■□□□□ 0.47
SCARNA20.5-201ENST00000516991 SLAIN1Q8ND83 568 aa17.97■□□□□ 0.47
SCARNA20.5-201ENST00000516991 ZNF384Q8TF68 577 aa17.97■□□□□ 0.47
SCARNA20.5-201ENST00000516991 OSBPL5Q9H0X9 879 aaPredicted RBP17.97■□□□□ 0.47
SCARNA20.5-201ENST00000516991 GPR108Q9NPR9 543 aa17.97■□□□□ 0.47
SCARNA20.5-201ENST00000516991 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.97■□□□□ 0.47
SCARNA20.5-201ENST00000516991 ATAD5Q96QE3 1844 aa17.96■□□□□ 0.47
SCARNA20.5-201ENST00000516991 TRIM75PA6NK02 468 aa17.96■□□□□ 0.47
SCARNA20.5-201ENST00000516991 BCAR3O75815 825 aa17.96■□□□□ 0.47
SCARNA20.5-201ENST00000516991 ECM2O94769 699 aaPredicted RBP17.96■□□□□ 0.47
SCARNA20.5-201ENST00000516991 UBXN2AP68543 259 aa17.96■□□□□ 0.47
SCARNA20.5-201ENST00000516991 ZKSCAN2Q63HK3 967 aa17.96■□□□□ 0.47
SCARNA20.5-201ENST00000516991 SMCR8Q8TEV9 937 aaPredicted RBP17.96■□□□□ 0.47
SCARNA20.5-201ENST00000516991 CLUAP1Q96AJ1 413 aa17.96■□□□□ 0.47
SCARNA20.5-201ENST00000516991 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.96■□□□□ 0.47
SCARNA20.5-201ENST00000516991 LRP2BPQ9P2M1 347 aa17.96■□□□□ 0.47
SCARNA20.5-201ENST00000516991 PNMA3Q9UL41 463 aa17.96■□□□□ 0.47
SCARNA20.5-201ENST00000516991 AGTPBP1Q9UPW5 1226 aa17.96■□□□□ 0.47
SCARNA20.5-201ENST00000516991 LOC285556D6RIA3 1793 aa17.96■□□□□ 0.47
SCARNA20.5-201ENST00000516991 IGSF3O75054 1194 aa17.95■□□□□ 0.46
SCARNA20.5-201ENST00000516991 MCAMP43121 646 aa17.95■□□□□ 0.46
SCARNA20.5-201ENST00000516991 PRKCZQ05513 592 aa17.95■□□□□ 0.46
SCARNA20.5-201ENST00000516991 TEX11Q8IYF3 940 aa17.95■□□□□ 0.46
SCARNA20.5-201ENST00000516991 PROCA1Q8NCQ7 364 aaPredicted RBP17.95■□□□□ 0.46
SCARNA20.5-201ENST00000516991 BIN2Q9UBW5 565 aaPredicted RBP17.95■□□□□ 0.46
SCARNA20.5-201ENST00000516991 TNNQ9UQP3 1299 aa17.95■□□□□ 0.46
SCARNA20.5-201ENST00000516991 CEP290O15078 2479 aa17.94■□□□□ 0.46
SCARNA20.5-201ENST00000516991 GJB1P08034 283 aa17.94■□□□□ 0.46
SCARNA20.5-201ENST00000516991 PLCG2P16885 1265 aa17.94■□□□□ 0.46
SCARNA20.5-201ENST00000516991 OS9Q13438 667 aaPredicted RBP17.94■□□□□ 0.46
SCARNA20.5-201ENST00000516991 POLA2Q14181 598 aa17.94■□□□□ 0.46
SCARNA20.5-201ENST00000516991 MTFR1Q15390 333 aa17.94■□□□□ 0.46
SCARNA20.5-201ENST00000516991 TBC1D9Q6ZT07 1266 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms