RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 CSRNP1Q96S65 589 aa13.53□□□□□ -0.24
SCARNA20-201ENST00000516768 ZNF112Q9UJU3 913 aa13.53□□□□□ -0.24
SCARNA20-201ENST00000516768 TTC41PQ6P2S7 1318 aa13.53□□□□□ -0.24
SCARNA20-201ENST00000516768 RPAP1Q9BWH6 1393 aaPredicted RBP13.53□□□□□ -0.24
SCARNA20-201ENST00000516768 TCRBV5S4A2TA0A5A2 114 aa13.52□□□□□ -0.25
SCARNA20-201ENST00000516768 ERC2O15083 957 aa13.52□□□□□ -0.25
SCARNA20-201ENST00000516768 HSPA1AP0DMV8 641 aaKnown RBP13.52□□□□□ -0.25
SCARNA20-201ENST00000516768 HSPA1BP0DMV9 641 aaKnown RBP13.52□□□□□ -0.25
SCARNA20-201ENST00000516768 PDE6AP16499 860 aa13.52□□□□□ -0.25
SCARNA20-201ENST00000516768 DYNLL1P63167 89 aaKnown RBP13.52□□□□□ -0.25
SCARNA20-201ENST00000516768 PICALMQ13492 652 aa13.52□□□□□ -0.25
SCARNA20-201ENST00000516768 SPRYD7Q5W111 196 aa13.52□□□□□ -0.25
SCARNA20-201ENST00000516768 ZSCAN29Q8IWY8 852 aaPredicted RBP13.52□□□□□ -0.25
SCARNA20-201ENST00000516768 REM2Q8IYK8 340 aaPredicted RBP13.52□□□□□ -0.25
SCARNA20-201ENST00000516768 OTUD7AQ8TE49 926 aaPredicted RBP13.52□□□□□ -0.25
SCARNA20-201ENST00000516768 TGFBRAP1Q8WUH2 860 aa13.52□□□□□ -0.25
SCARNA20-201ENST00000516768 STAP2Q9UGK3 403 aa13.52□□□□□ -0.25
SCARNA20-201ENST00000516768 RFX7Q2KHR2 1363 aa13.51□□□□□ -0.25
SCARNA20-201ENST00000516768 SALL3Q9BXA9 1300 aa13.51□□□□□ -0.25
SCARNA20-201ENST00000516768 ZNF532Q9HCE3 1301 aa13.51□□□□□ -0.25
SCARNA20-201ENST00000516768 TBC1D12O60347 775 aa13.51□□□□□ -0.25
SCARNA20-201ENST00000516768 MX1P20591 662 aa13.51□□□□□ -0.25
SCARNA20-201ENST00000516768 TM4SF4P48230 202 aa13.51□□□□□ -0.25
SCARNA20-201ENST00000516768 NUCB1Q02818 461 aa13.51□□□□□ -0.25
SCARNA20-201ENST00000516768 TSHZ3Q63HK5 1081 aa13.51□□□□□ -0.25
SCARNA20-201ENST00000516768 MIGA1Q8NAN2 632 aa13.51□□□□□ -0.25
SCARNA20-201ENST00000516768 PI4K2BQ8TCG2 481 aa13.51□□□□□ -0.25
SCARNA20-201ENST00000516768 ZNF341Q9BYN7 854 aa13.51□□□□□ -0.25
SCARNA20-201ENST00000516768 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.51□□□□□ -0.25
SCARNA20-201ENST00000516768 OSBPL5Q9H0X9 879 aaPredicted RBP13.51□□□□□ -0.25
SCARNA20-201ENST00000516768 PHF20L1A8MW92 1017 aa13.5□□□□□ -0.25
SCARNA20-201ENST00000516768 GLRX3O76003 335 aaKnown RBP13.5□□□□□ -0.25
SCARNA20-201ENST00000516768 ADD2P35612 726 aa13.5□□□□□ -0.25
SCARNA20-201ENST00000516768 VGLL4Q14135 290 aa13.5□□□□□ -0.25
SCARNA20-201ENST00000516768 UBE3CQ15386 1083 aa13.5□□□□□ -0.25
SCARNA20-201ENST00000516768 B4GALNT3Q6L9W6 998 aa13.5□□□□□ -0.25
SCARNA20-201ENST00000516768 CHD1LQ86WJ1 897 aa13.5□□□□□ -0.25
SCARNA20-201ENST00000516768 ZKSCAN4Q969J2 545 aaPredicted RBP13.5□□□□□ -0.25
SCARNA20-201ENST00000516768 WRNIP1Q96S55 665 aa13.5□□□□□ -0.25
SCARNA20-201ENST00000516768 RIOK1Q9BRS2 568 aaKnown RBP13.5□□□□□ -0.25
SCARNA20-201ENST00000516768 BEGAINQ9BUH8 593 aa13.5□□□□□ -0.25
SCARNA20-201ENST00000516768 DHX36Q9H2U1 1008 aaKnown RBP13.5□□□□□ -0.25
SCARNA20-201ENST00000516768 MYO5AQ9Y4I1 1855 aaKnown RBP13.5□□□□□ -0.25
SCARNA20-201ENST00000516768 ATRNL1Q5VV63 1379 aa13.49□□□□□ -0.25
SCARNA20-201ENST00000516768 MAGEB6P1A0A0J9YX57 407 aa13.49□□□□□ -0.25
SCARNA20-201ENST00000516768 ZBTB48P10074 688 aaPredicted RBP13.49□□□□□ -0.25
SCARNA20-201ENST00000516768 PDE1AP54750 535 aa13.49□□□□□ -0.25
SCARNA20-201ENST00000516768 INHBEP58166 350 aa13.49□□□□□ -0.25
SCARNA20-201ENST00000516768 ZSCAN25Q6NSZ9 544 aa13.49□□□□□ -0.25
SCARNA20-201ENST00000516768 FOXP4Q8IVH2 680 aaPredicted RBP13.49□□□□□ -0.25
SCARNA20-201ENST00000516768 KBTBD3Q8NAB2 608 aa13.49□□□□□ -0.25
SCARNA20-201ENST00000516768 LNPKQ9C0E8 428 aa13.49□□□□□ -0.25
SCARNA20-201ENST00000516768 PI4KBQ9UBF8 816 aa13.49□□□□□ -0.25
SCARNA20-201ENST00000516768 CSADQ9Y600 493 aa13.49□□□□□ -0.25
SCARNA20-201ENST00000516768 FOXN1O15353 648 aa13.48□□□□□ -0.25
SCARNA20-201ENST00000516768 INPP5BP32019 993 aa13.48□□□□□ -0.25
SCARNA20-201ENST00000516768 SLFNL1Q499Z3 407 aa13.48□□□□□ -0.25
SCARNA20-201ENST00000516768 METTL16Q86W50 562 aaKnown RBP13.48□□□□□ -0.25
SCARNA20-201ENST00000516768 MAPKAPK5Q8IW41 473 aa13.48□□□□□ -0.25
SCARNA20-201ENST00000516768 AIDAQ96BJ3 306 aa13.48□□□□□ -0.25
SCARNA20-201ENST00000516768 WNK4Q96J92 1243 aa13.48□□□□□ -0.25
SCARNA20-201ENST00000516768 ELP3Q9H9T3 547 aa13.48□□□□□ -0.25
SCARNA20-201ENST00000516768 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.48□□□□□ -0.25
SCARNA20-201ENST00000516768 PALD1Q9ULE6 856 aa13.48□□□□□ -0.25
SCARNA20-201ENST00000516768 FLT1P17948 1338 aa13.47□□□□□ -0.25
SCARNA20-201ENST00000516768 CA12O43570 354 aa13.47□□□□□ -0.25
SCARNA20-201ENST00000516768 CTNND1O60716 968 aaKnown RBP13.47□□□□□ -0.25
SCARNA20-201ENST00000516768 CHGBP05060 677 aa13.47□□□□□ -0.25
SCARNA20-201ENST00000516768 SLURP2P0DP57 97 aa13.47□□□□□ -0.25
SCARNA20-201ENST00000516768 GJA5P36382 358 aa13.47□□□□□ -0.25
SCARNA20-201ENST00000516768 USP5P45974 858 aa13.47□□□□□ -0.25
SCARNA20-201ENST00000516768 MKRN3Q13064 507 aaKnown RBP13.47□□□□□ -0.25
SCARNA20-201ENST00000516768 ERO1BQ86YB8 467 aa13.47□□□□□ -0.25
SCARNA20-201ENST00000516768 OPTNQ96CV9 577 aa13.47□□□□□ -0.25
SCARNA20-201ENST00000516768 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.47□□□□□ -0.25
SCARNA20-201ENST00000516768 SNCAIPQ9Y6H5 919 aa13.47□□□□□ -0.25
SCARNA20-201ENST00000516768 MANSC4A6NHS7 340 aaPredicted RBP13.46□□□□□ -0.25
SCARNA20-201ENST00000516768 SPDYE5A6NIY4 337 aa13.46□□□□□ -0.25
SCARNA20-201ENST00000516768 RNF113AO15541 343 aaKnown RBP13.46□□□□□ -0.25
SCARNA20-201ENST00000516768 ZFYP08048 801 aaPredicted RBP13.46□□□□□ -0.25
SCARNA20-201ENST00000516768 CTCFP49711 727 aaPredicted RBP13.46□□□□□ -0.25
SCARNA20-201ENST00000516768 NOL9Q5SY16 702 aaKnown RBP13.46□□□□□ -0.25
SCARNA20-201ENST00000516768 PLEKHM2Q8IWE5 1019 aa13.46□□□□□ -0.25
SCARNA20-201ENST00000516768 CNKSR2Q8WXI2 1034 aa13.46□□□□□ -0.25
SCARNA20-201ENST00000516768 MS4A4AQ96JQ5 239 aa13.46□□□□□ -0.25
SCARNA20-201ENST00000516768 CRNKL1Q9BZJ0 848 aaKnown RBP13.46□□□□□ -0.25
SCARNA20-201ENST00000516768 PUS7LQ9H0K6 701 aaKnown RBP13.46□□□□□ -0.25
SCARNA20-201ENST00000516768 OSBPL3Q9H4L5 887 aa13.46□□□□□ -0.25
SCARNA20-201ENST00000516768 RNF186Q9NXI6 227 aa13.46□□□□□ -0.25
SCARNA20-201ENST00000516768 HERC5Q9UII4 1024 aaKnown RBP13.46□□□□□ -0.25
SCARNA20-201ENST00000516768 COL2A1P02458 1487 aaPredicted RBP13.46□□□□□ -0.25
SCARNA20-201ENST00000516768 AK9Q5TCS8 1911 aa13.46□□□□□ -0.25
SCARNA20-201ENST00000516768 TESPA1A2RU30 521 aaPredicted RBP13.45□□□□□ -0.26
SCARNA20-201ENST00000516768 TRPA1O75762 1119 aa13.45□□□□□ -0.26
SCARNA20-201ENST00000516768 PPATQ06203 517 aa13.45□□□□□ -0.26
SCARNA20-201ENST00000516768 SREBF2Q12772 1141 aa13.45□□□□□ -0.26
SCARNA20-201ENST00000516768 LRRFIP1Q32MZ4 808 aaKnown RBP13.45□□□□□ -0.26
SCARNA20-201ENST00000516768 LCORLQ8N3X6 602 aa13.45□□□□□ -0.26
SCARNA20-201ENST00000516768 OSBP2Q969R2 916 aa13.45□□□□□ -0.26
SCARNA20-201ENST00000516768 ARMT1Q9H993 441 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms