RNA–Protein interactions for RNA: ENST00000515588.1

SERF1B-208, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2 BASIC

Gene SERF1B, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-208ENST00000515588 AATFQ9NY61 560 aaKnown RBP eCLIP19.21■□□□□ 0.67
SERF1B-208ENST00000515588 SNCAIPQ9Y6H5 919 aa19.21■□□□□ 0.67
SERF1B-208ENST00000515588 MAST2Q6P0Q8 1798 aa19.2■□□□□ 0.66
SERF1B-208ENST00000515588 IGSF3O75054 1194 aa19.2■□□□□ 0.66
SERF1B-208ENST00000515588 NPM3O75607 178 aaKnown RBP19.2■□□□□ 0.66
SERF1B-208ENST00000515588 MAP4K4O95819 1239 aaPredicted RBP19.2■□□□□ 0.66
SERF1B-208ENST00000515588 INPP5BP32019 993 aa19.2■□□□□ 0.66
SERF1B-208ENST00000515588 PPP4CP60510 307 aa19.2■□□□□ 0.66
SERF1B-208ENST00000515588 OPTNQ96CV9 577 aa19.2■□□□□ 0.66
SERF1B-208ENST00000515588 ZNF341Q9BYN7 854 aa19.2■□□□□ 0.66
SERF1B-208ENST00000515588 ZNF112Q9UJU3 913 aa19.2■□□□□ 0.66
SERF1B-208ENST00000515588 CYP7A1P22680 504 aa19.19■□□□□ 0.66
SERF1B-208ENST00000515588 SREBF2Q12772 1141 aa19.19■□□□□ 0.66
SERF1B-208ENST00000515588 MAGEB6Q8N7X4 407 aa19.19■□□□□ 0.66
SERF1B-208ENST00000515588 EDC3Q96F86 508 aaKnown RBP19.19■□□□□ 0.66
SERF1B-208ENST00000515588 CSADQ9Y600 493 aa19.19■□□□□ 0.66
SERF1B-208ENST00000515588 AK9Q5TCS8 1911 aa19.18■□□□□ 0.66
SERF1B-208ENST00000515588 MANSC4A6NHS7 340 aaPredicted RBP19.18■□□□□ 0.66
SERF1B-208ENST00000515588 BAG3O95817 575 aa19.18■□□□□ 0.66
SERF1B-208ENST00000515588 ATP5JP18859 108 aa19.18■□□□□ 0.66
SERF1B-208ENST00000515588 DYNLL1P63167 89 aaKnown RBP19.18■□□□□ 0.66
SERF1B-208ENST00000515588 MAP3K10Q02779 954 aa19.18■□□□□ 0.66
SERF1B-208ENST00000515588 ZSCAN29Q8IWY8 852 aaPredicted RBP19.18■□□□□ 0.66
SERF1B-208ENST00000515588 TEX11Q8IYF3 940 aa19.18■□□□□ 0.66
SERF1B-208ENST00000515588 TNS4Q8IZW8 715 aa19.18■□□□□ 0.66
SERF1B-208ENST00000515588 MS4A4AQ96JQ5 239 aa19.18■□□□□ 0.66
SERF1B-208ENST00000515588 DNAJC2Q99543 621 aaKnown RBP19.18■□□□□ 0.66
SERF1B-208ENST00000515588 SPDYE5A6NIY4 337 aa19.17■□□□□ 0.66
SERF1B-208ENST00000515588 PHF20L1A8MW92 1017 aa19.17■□□□□ 0.66
SERF1B-208ENST00000515588 GOLIM4O00461 696 aa19.17■□□□□ 0.66
SERF1B-208ENST00000515588 MAP3K12Q12852 859 aa19.17■□□□□ 0.66
SERF1B-208ENST00000515588 NOL10Q9BSC4 688 aaKnown RBP19.17■□□□□ 0.66
SERF1B-208ENST00000515588 OSBPL5Q9H0X9 879 aaPredicted RBP19.17■□□□□ 0.66
SERF1B-208ENST00000515588 BOLA2Q9H3K6 86 aa19.17■□□□□ 0.66
SERF1B-208ENST00000515588 IGF2BP3O00425 579 aaKnown RBP eCLIP19.16■□□□□ 0.66
SERF1B-208ENST00000515588 INHBEP58166 350 aa19.16■□□□□ 0.66
SERF1B-208ENST00000515588 TTF1Q15361 905 aaPredicted RBP19.16■□□□□ 0.66
SERF1B-208ENST00000515588 IFNL1Q8IU54 200 aa19.16■□□□□ 0.66
SERF1B-208ENST00000515588 MIGA1Q8NAN2 632 aa19.16■□□□□ 0.66
SERF1B-208ENST00000515588 OTUD5Q96G74 571 aa19.16■□□□□ 0.66
SERF1B-208ENST00000515588 PTPN18Q99952 460 aa19.16■□□□□ 0.66
SERF1B-208ENST00000515588 DOCK2Q92608 1830 aa19.16■□□□□ 0.66
SERF1B-208ENST00000515588 CASP8AP2Q9UKL3 1982 aa19.15■□□□□ 0.66
SERF1B-208ENST00000515588 TESPA1A2RU30 521 aaPredicted RBP19.15■□□□□ 0.66
SERF1B-208ENST00000515588 TBC1D8O95759 1140 aa19.15■□□□□ 0.66
SERF1B-208ENST00000515588 PLCG2P16885 1265 aa19.15■□□□□ 0.66
SERF1B-208ENST00000515588 ERO1BQ86YB8 467 aa19.15■□□□□ 0.66
SERF1B-208ENST00000515588 TGFBRAP1Q8WUH2 860 aa19.15■□□□□ 0.66
SERF1B-208ENST00000515588 HAUS7Q99871 368 aa19.15■□□□□ 0.66
SERF1B-208ENST00000515588 R3HDMLQ9H3Y0 253 aa19.15■□□□□ 0.66
SERF1B-208ENST00000515588 LAMB1P07942 1786 aa19.14■□□□□ 0.66
SERF1B-208ENST00000515588 PDE6AP16499 860 aa19.14■□□□□ 0.65
SERF1B-208ENST00000515588 NOL9Q5SY16 702 aaKnown RBP19.14■□□□□ 0.65
SERF1B-208ENST00000515588 MAPKAPK5Q8IW41 473 aa19.14■□□□□ 0.65
SERF1B-208ENST00000515588 BRI3BPQ8WY22 251 aa19.14■□□□□ 0.65
SERF1B-208ENST00000515588 PAG1Q9NWQ8 432 aa19.14■□□□□ 0.65
SERF1B-208ENST00000515588 SUPT16HQ9Y5B9 1047 aaKnown RBP19.14■□□□□ 0.65
SERF1B-208ENST00000515588 COL2A1P02458 1487 aaPredicted RBP19.14■□□□□ 0.65
SERF1B-208ENST00000515588 FAM196BA6NMK8 535 aa19.13■□□□□ 0.65
SERF1B-208ENST00000515588 IRF6O14896 467 aa19.13■□□□□ 0.65
SERF1B-208ENST00000515588 TBC1D12O60347 775 aa19.13■□□□□ 0.65
SERF1B-208ENST00000515588 SLC9C2Q5TAH2 1124 aa19.13■□□□□ 0.65
SERF1B-208ENST00000515588 IFFO2Q5TF58 517 aa19.13■□□□□ 0.65
SERF1B-208ENST00000515588 TMED8Q6PL24 325 aaPredicted RBP19.13■□□□□ 0.65
SERF1B-208ENST00000515588 FLT1P17948 1338 aa19.13■□□□□ 0.65
SERF1B-208ENST00000515588 TCRBV5S4A2TA0A5A2 114 aa19.12■□□□□ 0.65
SERF1B-208ENST00000515588 GTF2A2P52657 109 aa19.12■□□□□ 0.65
SERF1B-208ENST00000515588 PPIL2Q13356 520 aa19.12■□□□□ 0.65
SERF1B-208ENST00000515588 SLFNL1Q499Z3 407 aa19.12■□□□□ 0.65
SERF1B-208ENST00000515588 TSHZ3Q63HK5 1081 aa19.12■□□□□ 0.65
SERF1B-208ENST00000515588 EXOC6Q8TAG9 804 aa19.12■□□□□ 0.65
SERF1B-208ENST00000515588 RIOK1Q9BRS2 568 aaKnown RBP19.12■□□□□ 0.65
SERF1B-208ENST00000515588 CFHR5Q9BXR6 569 aa19.12■□□□□ 0.65
SERF1B-208ENST00000515588 ECHDC1Q9NTX5 307 aa19.12■□□□□ 0.65
SERF1B-208ENST00000515588 ZNF532Q9HCE3 1301 aa19.11■□□□□ 0.65
SERF1B-208ENST00000515588 CCL15-CCL14A0A0B4J2E2 113 aa19.11■□□□□ 0.65
SERF1B-208ENST00000515588 CHGBP05060 677 aa19.11■□□□□ 0.65
SERF1B-208ENST00000515588 PPATQ06203 517 aa19.11■□□□□ 0.65
SERF1B-208ENST00000515588 HDAC1Q13547 482 aaPredicted RBP19.11■□□□□ 0.65
SERF1B-208ENST00000515588 CCL15Q16663 113 aa19.11■□□□□ 0.65
SERF1B-208ENST00000515588 OTUD7AQ8TE49 926 aaPredicted RBP19.11■□□□□ 0.65
SERF1B-208ENST00000515588 CDK5RAP2Q96SN8 1893 aa19.11■□□□□ 0.65
SERF1B-208ENST00000515588 ALDH1A1P00352 501 aa19.1■□□□□ 0.65
SERF1B-208ENST00000515588 RRP1BQ14684 758 aaKnown RBP19.1■□□□□ 0.65
SERF1B-208ENST00000515588 SCYL3Q8IZE3 742 aa19.1■□□□□ 0.65
SERF1B-208ENST00000515588 DHX36Q9H2U1 1008 aaKnown RBP19.1■□□□□ 0.65
SERF1B-208ENST00000515588 SAP30BPQ9UHR5 308 aaKnown RBP19.1■□□□□ 0.65
SERF1B-208ENST00000515588 PALD1Q9ULE6 856 aa19.1■□□□□ 0.65
SERF1B-208ENST00000515588 GPR25O00155 361 aa19.09■□□□□ 0.65
SERF1B-208ENST00000515588 CERS3Q8IU89 383 aa19.09■□□□□ 0.65
SERF1B-208ENST00000515588 FAM43AQ8N2R8 423 aa19.09■□□□□ 0.65
SERF1B-208ENST00000515588 ZNF296Q8WUU4 475 aaPredicted RBP19.09■□□□□ 0.65
SERF1B-208ENST00000515588 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.09■□□□□ 0.65
SERF1B-208ENST00000515588 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.09■□□□□ 0.65
SERF1B-208ENST00000515588 PI4KBQ9UBF8 816 aa19.09■□□□□ 0.65
SERF1B-208ENST00000515588 KCNH4Q9UQ05 1017 aa19.09■□□□□ 0.65
SERF1B-208ENST00000515588 FOCADQ5VW36 1801 aa19.09■□□□□ 0.65
SERF1B-208ENST00000515588 MAGEB6P1A0A0J9YX57 407 aa19.08■□□□□ 0.64
SERF1B-208ENST00000515588 CTNND1O60716 968 aaKnown RBP19.08■□□□□ 0.64
SERF1B-208ENST00000515588 CETPP11597 493 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms