RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 GTF2IP78347 998 aa11.31□□□□□ -0.6
CDC42SE2-212ENST00000515533 CCDC184Q52MB2 194 aa11.31□□□□□ -0.6
CDC42SE2-212ENST00000515533 CTU1Q7Z7A3 348 aaKnown RBP11.31□□□□□ -0.6
CDC42SE2-212ENST00000515533 KIAA0825Q8IV33 1275 aa11.31□□□□□ -0.6
CDC42SE2-212ENST00000515533 LINS1Q8NG48 757 aa11.31□□□□□ -0.6
CDC42SE2-212ENST00000515533 DACH1Q9UI36 760 aa11.31□□□□□ -0.6
CDC42SE2-212ENST00000515533 CHMP3Q9Y3E7 222 aa11.31□□□□□ -0.6
CDC42SE2-212ENST00000515533 FANCIQ9NVI1 1328 aa11.31□□□□□ -0.6
CDC42SE2-212ENST00000515533 COL1A1P02452 1464 aaPredicted RBP11.31□□□□□ -0.6
CDC42SE2-212ENST00000515533 CSF1RP07333 972 aa11.3□□□□□ -0.6
CDC42SE2-212ENST00000515533 KLRK1P26718 216 aa11.3□□□□□ -0.6
CDC42SE2-212ENST00000515533 CHRNDQ07001 517 aa11.3□□□□□ -0.6
CDC42SE2-212ENST00000515533 SREBF2Q12772 1141 aa11.3□□□□□ -0.6
CDC42SE2-212ENST00000515533 ARMC9Q7Z3E5 817 aa11.3□□□□□ -0.6
CDC42SE2-212ENST00000515533 METTL3Q86U44 580 aaKnown RBP11.3□□□□□ -0.6
CDC42SE2-212ENST00000515533 TOR4AQ9NXH8 423 aa11.3□□□□□ -0.6
CDC42SE2-212ENST00000515533 OTOFQ9HC10 1997 aa11.3□□□□□ -0.6
CDC42SE2-212ENST00000515533 AVPP01185 164 aa11.29□□□□□ -0.6
CDC42SE2-212ENST00000515533 CASP7P55210 303 aa11.29□□□□□ -0.6
CDC42SE2-212ENST00000515533 SOX10P56693 466 aa11.29□□□□□ -0.6
CDC42SE2-212ENST00000515533 IFIT5Q13325 482 aaKnown RBP11.29□□□□□ -0.6
CDC42SE2-212ENST00000515533 PRKG1Q13976 671 aa11.29□□□□□ -0.6
CDC42SE2-212ENST00000515533 TMEM132AQ24JP5 1023 aa11.29□□□□□ -0.6
CDC42SE2-212ENST00000515533 MRS2Q9HD23 443 aa11.29□□□□□ -0.6
CDC42SE2-212ENST00000515533 FCF1Q9Y324 198 aaKnown RBP11.29□□□□□ -0.6
CDC42SE2-212ENST00000515533 SALL2Q9Y467 1007 aaPredicted RBP11.29□□□□□ -0.6
CDC42SE2-212ENST00000515533 AK9Q5TCS8 1911 aa11.29□□□□□ -0.6
CDC42SE2-212ENST00000515533 KIAA0100Q14667 2235 aaKnown RBP11.28□□□□□ -0.6
CDC42SE2-212ENST00000515533 MYO1BO43795 1136 aa11.28□□□□□ -0.6
CDC42SE2-212ENST00000515533 TBC1D8O95759 1140 aa11.28□□□□□ -0.6
CDC42SE2-212ENST00000515533 DLGAP5Q15398 846 aa11.28□□□□□ -0.6
CDC42SE2-212ENST00000515533 PKN2Q16513 984 aaKnown RBP11.28□□□□□ -0.6
CDC42SE2-212ENST00000515533 TAF7LQ5H9L4 462 aa11.28□□□□□ -0.6
CDC42SE2-212ENST00000515533 ZNF804AQ7Z570 1209 aa11.28□□□□□ -0.6
CDC42SE2-212ENST00000515533 ZNF296Q8WUU4 475 aaPredicted RBP11.28□□□□□ -0.6
CDC42SE2-212ENST00000515533 CD209Q9NNX6 404 aa11.28□□□□□ -0.6
CDC42SE2-212ENST00000515533 ANGEL1Q9UNK9 670 aaKnown RBP11.28□□□□□ -0.6
CDC42SE2-212ENST00000515533 VAMP4O75379 141 aa11.27□□□□□ -0.61
CDC42SE2-212ENST00000515533 TAF5LO75529 589 aa11.27□□□□□ -0.61
CDC42SE2-212ENST00000515533 TM4SF4P48230 202 aa11.27□□□□□ -0.61
CDC42SE2-212ENST00000515533 EXOSC9Q06265 439 aaKnown RBP11.27□□□□□ -0.61
CDC42SE2-212ENST00000515533 CCDC57Q2TAC2 916 aa11.27□□□□□ -0.61
CDC42SE2-212ENST00000515533 MORN1Q5T089 497 aa11.27□□□□□ -0.61
CDC42SE2-212ENST00000515533 WDR63Q8IWG1 891 aa11.27□□□□□ -0.61
CDC42SE2-212ENST00000515533 HELBQ8NG08 1087 aaPredicted RBP11.27□□□□□ -0.61
CDC42SE2-212ENST00000515533 THAP11Q96EK4 314 aa11.27□□□□□ -0.61
CDC42SE2-212ENST00000515533 F6X3S4 739 aa11.26□□□□□ -0.61
CDC42SE2-212ENST00000515533 F8W031 263 aaPredicted RBP11.26□□□□□ -0.61
CDC42SE2-212ENST00000515533 SNAP23O00161 211 aa11.26□□□□□ -0.61
CDC42SE2-212ENST00000515533 PPP1R12BO60237 982 aaPredicted RBP11.26□□□□□ -0.61
CDC42SE2-212ENST00000515533 CD2BP2O95400 341 aaKnown RBP11.26□□□□□ -0.61
CDC42SE2-212ENST00000515533 PTPN12Q05209 780 aaKnown RBP11.26□□□□□ -0.61
CDC42SE2-212ENST00000515533 HIC1Q14526 733 aa11.26□□□□□ -0.61
CDC42SE2-212ENST00000515533 NOM1Q5C9Z4 860 aaKnown RBP11.26□□□□□ -0.61
CDC42SE2-212ENST00000515533 C15orf52Q6ZUT6 534 aaKnown RBP11.26□□□□□ -0.61
CDC42SE2-212ENST00000515533 DEFB129Q9H1M3 183 aa11.26□□□□□ -0.61
CDC42SE2-212ENST00000515533 CNNM1Q9NRU3 951 aa11.26□□□□□ -0.61
CDC42SE2-212ENST00000515533 PPP2R3BQ9Y5P8 575 aa11.26□□□□□ -0.61
CDC42SE2-212ENST00000515533 HTTP42858 3142 aa11.26□□□□□ -0.61
CDC42SE2-212ENST00000515533 MKI67P46013 3256 aaKnown RBP11.25□□□□□ -0.61
CDC42SE2-212ENST00000515533 GPR25O00155 361 aa11.25□□□□□ -0.61
CDC42SE2-212ENST00000515533 GRM8O00222 908 aa11.25□□□□□ -0.61
CDC42SE2-212ENST00000515533 AXIN1O15169 862 aa11.25□□□□□ -0.61
CDC42SE2-212ENST00000515533 ANP32CO43423 234 aa11.25□□□□□ -0.61
CDC42SE2-212ENST00000515533 PLIN1O60240 522 aa11.25□□□□□ -0.61
CDC42SE2-212ENST00000515533 ALDH1A1P00352 501 aa11.25□□□□□ -0.61
CDC42SE2-212ENST00000515533 FOXO4P98177 505 aa11.25□□□□□ -0.61
CDC42SE2-212ENST00000515533 CFAP100Q494V2 611 aa11.25□□□□□ -0.61
CDC42SE2-212ENST00000515533 BEND3Q5T5X7 828 aa11.25□□□□□ -0.61
CDC42SE2-212ENST00000515533 LMBR1LQ6UX01 489 aa11.25□□□□□ -0.61
CDC42SE2-212ENST00000515533 LDHAL6AQ6ZMR3 332 aa11.25□□□□□ -0.61
CDC42SE2-212ENST00000515533 CYP4X1Q8N118 509 aa11.25□□□□□ -0.61
CDC42SE2-212ENST00000515533 CERS5Q8N5B7 392 aa11.25□□□□□ -0.61
CDC42SE2-212ENST00000515533 MTMR14Q8NCE2 650 aa11.25□□□□□ -0.61
CDC42SE2-212ENST00000515533 ZBED3Q96IU2 234 aaPredicted RBP11.25□□□□□ -0.61
CDC42SE2-212ENST00000515533 VEZTQ9HBM0 779 aa11.25□□□□□ -0.61
CDC42SE2-212ENST00000515533 C9orf78Q9NZ63 289 aaPredicted RBP11.25□□□□□ -0.61
CDC42SE2-212ENST00000515533 GMPR2Q9P2T1 348 aaKnown RBP11.25□□□□□ -0.61
CDC42SE2-212ENST00000515533 GTF3C3Q9Y5Q9 886 aa11.25□□□□□ -0.61
CDC42SE2-212ENST00000515533 BRCA2P51587 3418 aa11.25□□□□□ -0.61
CDC42SE2-212ENST00000515533 RBBP6Q7Z6E9 1792 aaKnown RBP11.25□□□□□ -0.61
CDC42SE2-212ENST00000515533 CLRN2A0PK11 232 aa11.24□□□□□ -0.61
CDC42SE2-212ENST00000515533 FKTNO75072 461 aa11.24□□□□□ -0.61
CDC42SE2-212ENST00000515533 ZMYND10O75800 440 aa11.24□□□□□ -0.61
CDC42SE2-212ENST00000515533 IL1R1P14778 569 aa11.24□□□□□ -0.61
CDC42SE2-212ENST00000515533 RBM5P52756 815 aaKnown RBP eCLIP11.24□□□□□ -0.61
CDC42SE2-212ENST00000515533 FKBP1AP62942 108 aaKnown RBP11.24□□□□□ -0.61
CDC42SE2-212ENST00000515533 FUT2Q10981 343 aa11.24□□□□□ -0.61
CDC42SE2-212ENST00000515533 CTC1Q2NKJ3 1217 aa11.24□□□□□ -0.61
CDC42SE2-212ENST00000515533 SUPT20HL1Q3ZLR7 823 aa11.24□□□□□ -0.61
CDC42SE2-212ENST00000515533 LDLRAD1Q5T700 205 aa11.24□□□□□ -0.61
CDC42SE2-212ENST00000515533 FAM160A2Q8N612 972 aaPredicted RBP11.24□□□□□ -0.61
CDC42SE2-212ENST00000515533 RDH13Q8NBN7 331 aa11.24□□□□□ -0.61
CDC42SE2-212ENST00000515533 SLC10A4Q96EP9 437 aa11.24□□□□□ -0.61
CDC42SE2-212ENST00000515533 FZD1Q9UP38 647 aa11.24□□□□□ -0.61
CDC42SE2-212ENST00000515533 JAG2Q9Y219 1238 aa11.24□□□□□ -0.61
CDC42SE2-212ENST00000515533 IRS2Q9Y4H2 1338 aa11.24□□□□□ -0.61
CDC42SE2-212ENST00000515533 SSC5DA1L4H1 1573 aa11.24□□□□□ -0.61
CDC42SE2-212ENST00000515533 MANSC4A6NHS7 340 aaPredicted RBP11.23□□□□□ -0.61
CDC42SE2-212ENST00000515533 ZBTB48P10074 688 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms