RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 CCDC102BQ68D86 513 aa14.56□□□□□ -0.08
SMAD1-215ENST00000515385 ISM2Q6H9L7 571 aa14.56□□□□□ -0.08
SMAD1-215ENST00000515385 AMOTL1Q8IY63 956 aa14.56□□□□□ -0.08
SMAD1-215ENST00000515385 PLEKHA4Q9H4M7 779 aa14.56□□□□□ -0.08
SMAD1-215ENST00000515385 TTC36A6NLP5 189 aa14.56□□□□□ -0.08
SMAD1-215ENST00000515385 FDPSP14324 419 aaKnown RBP14.56□□□□□ -0.08
SMAD1-215ENST00000515385 USP14P54578 494 aa14.56□□□□□ -0.08
SMAD1-215ENST00000515385 NEDD9Q14511 834 aa14.56□□□□□ -0.08
SMAD1-215ENST00000515385 IL17REQ8NFR9 667 aa14.56□□□□□ -0.08
SMAD1-215ENST00000515385 SGSM3Q96HU1 749 aa14.56□□□□□ -0.08
SMAD1-215ENST00000515385 SEC62Q99442 399 aaKnown RBP14.56□□□□□ -0.08
SMAD1-215ENST00000515385 CRACR2AQ9BSW2 395 aa14.56□□□□□ -0.08
SMAD1-215ENST00000515385 DSCC1Q9BVC3 393 aa14.56□□□□□ -0.08
SMAD1-215ENST00000515385 LRRC2Q9BYS8 371 aa14.56□□□□□ -0.08
SMAD1-215ENST00000515385 IRX2Q9BZI1 471 aaPredicted RBP14.56□□□□□ -0.08
SMAD1-215ENST00000515385 COL15A1P39059 1388 aa14.55□□□□□ -0.08
SMAD1-215ENST00000515385 FSBPO95073 299 aa14.55□□□□□ -0.08
SMAD1-215ENST00000515385 FECHP22830 423 aa14.55□□□□□ -0.08
SMAD1-215ENST00000515385 ZKSCAN8Q15776 578 aaPredicted RBP14.55□□□□□ -0.08
SMAD1-215ENST00000515385 CYB5RLQ6IPT4 315 aa14.55□□□□□ -0.08
SMAD1-215ENST00000515385 STOX1Q6ZVD7 989 aa14.55□□□□□ -0.08
SMAD1-215ENST00000515385 SLC35F6Q8N357 371 aa14.55□□□□□ -0.08
SMAD1-215ENST00000515385 EYA1Q99502 592 aa14.55□□□□□ -0.08
SMAD1-215ENST00000515385 MYO6Q9UM54 1294 aa14.55□□□□□ -0.08
SMAD1-215ENST00000515385 A2ML1A8K2U0 1454 aa14.55□□□□□ -0.08
SMAD1-215ENST00000515385 KDM6AO15550 1401 aaPredicted RBP14.55□□□□□ -0.08
SMAD1-215ENST00000515385 ANKARQ7Z5J8 1434 aa14.55□□□□□ -0.08
SMAD1-215ENST00000515385 UTYO14607 1347 aa14.55□□□□□ -0.08
SMAD1-215ENST00000515385 SH3TC1Q8TE82 1336 aa14.55□□□□□ -0.08
SMAD1-215ENST00000515385 TSPOAP1O95153 1857 aa14.54□□□□□ -0.08
SMAD1-215ENST00000515385 A0A1B0GTH6 734 aa14.54□□□□□ -0.08
SMAD1-215ENST00000515385 SOWAHDA6NJG2 315 aa14.54□□□□□ -0.08
SMAD1-215ENST00000515385 CHUKO15111 745 aa14.54□□□□□ -0.08
SMAD1-215ENST00000515385 POLR3DP05423 398 aaPredicted RBP14.54□□□□□ -0.08
SMAD1-215ENST00000515385 GPTP24298 496 aa14.54□□□□□ -0.08
SMAD1-215ENST00000515385 RDXP35241 583 aaKnown RBP14.54□□□□□ -0.08
SMAD1-215ENST00000515385 PNOCQ13519 176 aa14.54□□□□□ -0.08
SMAD1-215ENST00000515385 PLEKHO1Q53GL0 409 aaPredicted RBP14.54□□□□□ -0.08
SMAD1-215ENST00000515385 RESP18Q5W5W9 173 aa14.54□□□□□ -0.08
SMAD1-215ENST00000515385 RAD9BQ6WBX8 426 aa14.54□□□□□ -0.08
SMAD1-215ENST00000515385 TRIML1Q8N9V2 468 aa14.54□□□□□ -0.08
SMAD1-215ENST00000515385 CAPS2Q9BXY5 557 aa14.54□□□□□ -0.08
SMAD1-215ENST00000515385 MROH7-TTC4A0A0A0MT08 1334 aa14.54□□□□□ -0.08
SMAD1-215ENST00000515385 GOLGA6CA6NDK9 693 aa14.54□□□□□ -0.08
SMAD1-215ENST00000515385 EIF3HO15372 352 aaKnown RBP eCLIP14.54□□□□□ -0.08
SMAD1-215ENST00000515385 KIAA0754O94854 1291 aa14.54□□□□□ -0.08
SMAD1-215ENST00000515385 GOLGA6DP0CG33 693 aa14.54□□□□□ -0.08
SMAD1-215ENST00000515385 ARHGAP25P42331 645 aa14.54□□□□□ -0.08
SMAD1-215ENST00000515385 FBXW10Q5XX13 1052 aa14.54□□□□□ -0.08
SMAD1-215ENST00000515385 MICALCLQ6ZW33 695 aa14.54□□□□□ -0.08
SMAD1-215ENST00000515385 CLIC6Q96NY7 704 aa14.54□□□□□ -0.08
SMAD1-215ENST00000515385 KAT14Q9H8E8 782 aa14.54□□□□□ -0.08
SMAD1-215ENST00000515385 NCOA5Q9HCD5 579 aaKnown RBP14.54□□□□□ -0.08
SMAD1-215ENST00000515385 GOLGA6AQ9NYA3 693 aa14.54□□□□□ -0.08
SMAD1-215ENST00000515385 NFE2L3Q9Y4A8 694 aa14.54□□□□□ -0.08
SMAD1-215ENST00000515385 FMN2Q9NZ56 1722 aa14.54□□□□□ -0.08
SMAD1-215ENST00000515385 ZC3H4Q9UPT8 1303 aaKnown RBP14.53□□□□□ -0.08
SMAD1-215ENST00000515385 RIMS1Q86UR5 1692 aaKnown RBP14.53□□□□□ -0.08
SMAD1-215ENST00000515385 GOLGA8KD6RF30 607 aa14.53□□□□□ -0.08
SMAD1-215ENST00000515385 ERCC3P19447 782 aa14.53□□□□□ -0.08
SMAD1-215ENST00000515385 AMPD2Q01433 879 aa14.53□□□□□ -0.08
SMAD1-215ENST00000515385 MTF1Q14872 753 aa14.53□□□□□ -0.08
SMAD1-215ENST00000515385 C11orf91Q3C1V1 193 aa14.53□□□□□ -0.08
SMAD1-215ENST00000515385 LRCH2Q5VUJ6 765 aa14.53□□□□□ -0.08
SMAD1-215ENST00000515385 TMTC1Q8IUR5 882 aa14.53□□□□□ -0.08
SMAD1-215ENST00000515385 CNGA4Q8IV77 575 aa14.53□□□□□ -0.08
SMAD1-215ENST00000515385 BCAS4Q8TDM0 211 aa14.53□□□□□ -0.08
SMAD1-215ENST00000515385 XAGE2Q96GT9 111 aa14.53□□□□□ -0.08
SMAD1-215ENST00000515385 TLR7Q9NYK1 1049 aaKnown RBP14.53□□□□□ -0.08
SMAD1-215ENST00000515385 CHPF2Q9P2E5 772 aa14.53□□□□□ -0.08
SMAD1-215ENST00000515385 ZNF609O15014 1411 aa14.53□□□□□ -0.08
SMAD1-215ENST00000515385 PLEKHG3A1L390 1219 aa14.53□□□□□ -0.08
SMAD1-215ENST00000515385 EIF2S2P20042 333 aaKnown RBP14.53□□□□□ -0.08
SMAD1-215ENST00000515385 EIF4A1P60842 406 aaKnown RBP14.53□□□□□ -0.08
SMAD1-215ENST00000515385 KIF23Q02241 960 aaPredicted RBP14.53□□□□□ -0.08
SMAD1-215ENST00000515385 NBPF14Q5TI25 921 aa14.53□□□□□ -0.08
SMAD1-215ENST00000515385 YTHDF3Q7Z739 585 aaKnown RBP14.53□□□□□ -0.08
SMAD1-215ENST00000515385 METTL16Q86W50 562 aaKnown RBP14.53□□□□□ -0.08
SMAD1-215ENST00000515385 RUBCNQ92622 972 aa14.53□□□□□ -0.08
SMAD1-215ENST00000515385 HELLSQ9NRZ9 838 aa14.53□□□□□ -0.08
SMAD1-215ENST00000515385 PCDHA5Q9Y5H7 936 aa14.53□□□□□ -0.08
SMAD1-215ENST00000515385 TECPR2O15040 1411 aa14.52□□□□□ -0.09
SMAD1-215ENST00000515385 ERCC5P28715 1186 aaPredicted RBP14.52□□□□□ -0.09
SMAD1-215ENST00000515385 CKAP4Q07065 602 aaKnown RBP14.52□□□□□ -0.09
SMAD1-215ENST00000515385 SEMA3FQ13275 785 aa14.52□□□□□ -0.09
SMAD1-215ENST00000515385 DIP2AQ14689 1571 aa14.52□□□□□ -0.09
SMAD1-215ENST00000515385 NT5DC1Q5TFE4 455 aa14.52□□□□□ -0.09
SMAD1-215ENST00000515385 SHC4Q6S5L8 630 aa14.52□□□□□ -0.09
SMAD1-215ENST00000515385 NOA1Q8NC60 698 aaKnown RBP14.52□□□□□ -0.09
SMAD1-215ENST00000515385 TBC1D22AQ8WUA7 517 aa14.52□□□□□ -0.09
SMAD1-215ENST00000515385 CTAGE1Q96RT6 745 aa14.52□□□□□ -0.09
SMAD1-215ENST00000515385 USP6P35125 1406 aa14.51□□□□□ -0.09
SMAD1-215ENST00000515385 GGCXP38435 758 aa14.51□□□□□ -0.09
SMAD1-215ENST00000515385 FNTAP49354 379 aa14.51□□□□□ -0.09
SMAD1-215ENST00000515385 AKAP17AQ02040 695 aaKnown RBP14.51□□□□□ -0.09
SMAD1-215ENST00000515385 PLCB4Q15147 1175 aa14.51□□□□□ -0.09
SMAD1-215ENST00000515385 KSR2Q6VAB6 950 aa14.51□□□□□ -0.09
SMAD1-215ENST00000515385 PAGR1Q9BTK6 254 aa14.51□□□□□ -0.09
SMAD1-215ENST00000515385 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.51□□□□□ -0.09
SMAD1-215ENST00000515385 DBF4Q9UBU7 674 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms