RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 C9orf172C9J069 976 aa2.71□□□□□ -1.97
AC025539.1-201ENST00000515343 SPATA31C1P0DKV0 1188 aa2.71□□□□□ -1.97
AC025539.1-201ENST00000515343 ZNF165P49910 485 aa2.71□□□□□ -1.97
AC025539.1-201ENST00000515343 CPSF6Q16630 551 aaKnown RBP eCLIP2.71□□□□□ -1.97
AC025539.1-201ENST00000515343 ZC3H12BQ5HYM0 836 aaKnown RBP2.71□□□□□ -1.97
AC025539.1-201ENST00000515343 ANKRD34AQ69YU3 496 aa2.71□□□□□ -1.97
AC025539.1-201ENST00000515343 NACC1Q96RE7 527 aa2.71□□□□□ -1.97
AC025539.1-201ENST00000515343 WNT10AQ9GZT5 417 aa2.71□□□□□ -1.97
AC025539.1-201ENST00000515343 CCDC86Q9H6F5 360 aaKnown RBP2.71□□□□□ -1.97
AC025539.1-201ENST00000515343 PRKAG3Q9UGI9 489 aa2.71□□□□□ -1.97
AC025539.1-201ENST00000515343 GGT7Q9UJ14 662 aa2.71□□□□□ -1.97
AC025539.1-201ENST00000515343 SLC12A7Q9Y666 1083 aa2.71□□□□□ -1.97
AC025539.1-201ENST00000515343 SMARCA2P51531 1590 aa2.71□□□□□ -1.98
AC025539.1-201ENST00000515343 LOC100289279A0A1B0GTE1 492 aa2.71□□□□□ -1.98
AC025539.1-201ENST00000515343 FANCGO15287 622 aa2.71□□□□□ -1.98
AC025539.1-201ENST00000515343 TMPRSS2O15393 492 aa2.71□□□□□ -1.98
AC025539.1-201ENST00000515343 CD68P34810 354 aaPredicted RBP2.71□□□□□ -1.98
AC025539.1-201ENST00000515343 ANKRD39Q53RE8 183 aa2.71□□□□□ -1.98
AC025539.1-201ENST00000515343 FAM117BQ6P1L5 589 aa2.71□□□□□ -1.98
AC025539.1-201ENST00000515343 REC114Q7Z4M0 266 aa2.71□□□□□ -1.98
AC025539.1-201ENST00000515343 KCT2Q8NC54 265 aa2.71□□□□□ -1.98
AC025539.1-201ENST00000515343 NKD1Q969G9 470 aa2.71□□□□□ -1.98
AC025539.1-201ENST00000515343 WDR18Q9BV38 432 aa2.71□□□□□ -1.98
AC025539.1-201ENST00000515343 EPN3Q9H201 632 aa2.71□□□□□ -1.98
AC025539.1-201ENST00000515343 CAPN10Q9HC96 672 aa2.71□□□□□ -1.98
AC025539.1-201ENST00000515343 CTSBP07858 339 aa2.71□□□□□ -1.98
AC025539.1-201ENST00000515343 RBM10P98175 930 aaKnown RBP2.71□□□□□ -1.98
AC025539.1-201ENST00000515343 POU4F3Q15319 338 aa2.71□□□□□ -1.98
AC025539.1-201ENST00000515343 SLC6A19Q695T7 634 aa2.71□□□□□ -1.98
AC025539.1-201ENST00000515343 FAM214BQ7L5A3 538 aa2.71□□□□□ -1.98
AC025539.1-201ENST00000515343 PSMG3-AS1Q96PY0 264 aa2.71□□□□□ -1.98
AC025539.1-201ENST00000515343 SPON2Q9BUD6 331 aa2.71□□□□□ -1.98
AC025539.1-201ENST00000515343 BRINP2Q9C0B6 783 aa2.71□□□□□ -1.98
AC025539.1-201ENST00000515343 F13A1P00488 732 aa2.71□□□□□ -1.98
AC025539.1-201ENST00000515343 ZBTB37Q5TC79 503 aa2.71□□□□□ -1.98
AC025539.1-201ENST00000515343 ZNF746Q6NUN9 644 aaPredicted RBP2.71□□□□□ -1.98
AC025539.1-201ENST00000515343 PPP1R3FQ6ZSY5 799 aaPredicted RBP2.71□□□□□ -1.98
AC025539.1-201ENST00000515343 RAB44Q7Z6P3 723 aaPredicted RBP2.71□□□□□ -1.98
AC025539.1-201ENST00000515343 MCATQ8IVS2 390 aaKnown RBP2.71□□□□□ -1.98
AC025539.1-201ENST00000515343 RNF214Q8ND24 703 aa2.71□□□□□ -1.98
AC025539.1-201ENST00000515343 SMARCC1Q92922 1105 aaPredicted RBP2.71□□□□□ -1.98
AC025539.1-201ENST00000515343 MIR1-1HGQ9H1L0 117 aa2.71□□□□□ -1.98
AC025539.1-201ENST00000515343 MKNK2Q9HBH9 465 aa2.71□□□□□ -1.98
AC025539.1-201ENST00000515343 ERCC6Q03468 1493 aa2.7□□□□□ -1.98
AC025539.1-201ENST00000515343 SLFN12Q8IYM2 578 aa2.7□□□□□ -1.98
AC025539.1-201ENST00000515343 SCARF2Q96GP6 870 aaPredicted RBP2.7□□□□□ -1.98
AC025539.1-201ENST00000515343 JPH1Q9HDC5 661 aaPredicted RBP2.7□□□□□ -1.98
AC025539.1-201ENST00000515343 GINM1Q9NU53 330 aa2.7□□□□□ -1.98
AC025539.1-201ENST00000515343 GMIPQ9P107 970 aa2.7□□□□□ -1.98
AC025539.1-201ENST00000515343 METTL12A8MUP2 240 aa2.7□□□□□ -1.98
AC025539.1-201ENST00000515343 IGSF3O75054 1194 aa2.7□□□□□ -1.98
AC025539.1-201ENST00000515343 IGHA1P01876 353 aa2.7□□□□□ -1.98
AC025539.1-201ENST00000515343 RAC1P63000 192 aa2.7□□□□□ -1.98
AC025539.1-201ENST00000515343 NRG1Q02297 640 aaPredicted RBP2.7□□□□□ -1.98
AC025539.1-201ENST00000515343 CWF19L2Q2TBE0 894 aaKnown RBP2.7□□□□□ -1.98
AC025539.1-201ENST00000515343 BEND7Q8N7W2 519 aaPredicted RBP2.7□□□□□ -1.98
AC025539.1-201ENST00000515343 ZSCAN1Q8NBB4 408 aa2.7□□□□□ -1.98
AC025539.1-201ENST00000515343 PPP1R13LQ8WUF5 828 aa2.7□□□□□ -1.98
AC025539.1-201ENST00000515343 SH2B1Q9NRF2 756 aaPredicted RBP2.7□□□□□ -1.98
AC025539.1-201ENST00000515343 PCDHB5Q9Y5E4 795 aa2.7□□□□□ -1.98
AC025539.1-201ENST00000515343 ID3Q02535 119 aa2.7□□□□□ -1.98
AC025539.1-201ENST00000515343 LRFN4Q6PJG9 635 aa2.7□□□□□ -1.98
AC025539.1-201ENST00000515343 HFE2Q6ZVN8 426 aa2.7□□□□□ -1.98
AC025539.1-201ENST00000515343 GPBAR1Q8TDU6 330 aa2.7□□□□□ -1.98
AC025539.1-201ENST00000515343 FBXL18Q96ME1 805 aa2.7□□□□□ -1.98
AC025539.1-201ENST00000515343 INPP5FQ9Y2H2 1132 aa2.7□□□□□ -1.98
AC025539.1-201ENST00000515343 LINC01387J3KSC0 135 aa2.69□□□□□ -1.98
AC025539.1-201ENST00000515343 IGF2BP3O00425 579 aaKnown RBP eCLIP2.69□□□□□ -1.98
AC025539.1-201ENST00000515343 GBP2P32456 591 aaPredicted RBP2.69□□□□□ -1.98
AC025539.1-201ENST00000515343 MLLT1Q03111 559 aaPredicted RBP2.69□□□□□ -1.98
AC025539.1-201ENST00000515343 HDXQ7Z353 690 aa2.69□□□□□ -1.98
AC025539.1-201ENST00000515343 C2CD4AQ8NCU7 369 aaPredicted RBP2.69□□□□□ -1.98
AC025539.1-201ENST00000515343 ZNF507Q8TCN5 953 aa2.69□□□□□ -1.98
AC025539.1-201ENST00000515343 RNF208Q9H0X6 261 aa2.69□□□□□ -1.98
AC025539.1-201ENST00000515343 ATXN3LQ9H3M9 355 aa2.69□□□□□ -1.98
AC025539.1-201ENST00000515343 ACSS3Q9H6R3 686 aa2.69□□□□□ -1.98
AC025539.1-201ENST00000515343 KCNK4Q9NYG8 393 aa2.69□□□□□ -1.98
AC025539.1-201ENST00000515343 PRKAG2Q9UGJ0 569 aa2.69□□□□□ -1.98
AC025539.1-201ENST00000515343 A0A087WZG4 1122 aa2.69□□□□□ -1.98
AC025539.1-201ENST00000515343 CRKP46108 304 aa2.69□□□□□ -1.98
AC025539.1-201ENST00000515343 RAB33AQ14088 237 aa2.69□□□□□ -1.98
AC025539.1-201ENST00000515343 TPTE2Q6XPS3 522 aa2.69□□□□□ -1.98
AC025539.1-201ENST00000515343 C8orf86Q6ZUL3 223 aa2.69□□□□□ -1.98
AC025539.1-201ENST00000515343 ZNF513Q8N8E2 541 aaPredicted RBP2.69□□□□□ -1.98
AC025539.1-201ENST00000515343 TMEM40Q8WWA1 233 aa2.69□□□□□ -1.98
AC025539.1-201ENST00000515343 AKAP2Q9Y2D5 859 aa2.69□□□□□ -1.98
AC025539.1-201ENST00000515343 DLGAP3O95886 979 aa2.69□□□□□ -1.98
AC025539.1-201ENST00000515343 BNC2Q6ZN30 1099 aaPredicted RBP2.69□□□□□ -1.98
AC025539.1-201ENST00000515343 ST13P5Q8NFI4 369 aaPredicted RBP2.69□□□□□ -1.98
AC025539.1-201ENST00000515343 GRIN3AQ8TCU5 1115 aa2.69□□□□□ -1.98
AC025539.1-201ENST00000515343 KLHDC7BQ96G42 594 aa2.69□□□□□ -1.98
AC025539.1-201ENST00000515343 PCOLCE2Q9UKZ9 415 aa2.69□□□□□ -1.98
AC025539.1-201ENST00000515343 ADAMTS8Q9UP79 889 aa2.69□□□□□ -1.98
AC025539.1-201ENST00000515343 SLC22A31A6NKX4 558 aa2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 FAM177BA6PVY3 158 aa2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 CST3P01034 146 aaPredicted RBP2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 PTPN11Q06124 597 aaPredicted RBP2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 SOX4Q06945 474 aaPredicted RBP2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 HGSNATQ68CP4 663 aa2.68□□□□□ -1.98
AC025539.1-201ENST00000515343 LSRQ86X29 649 aaPredicted RBP2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms