RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 MECOMQ03112 1051 aa8.6□□□□□ -1.03
SMAD1-213ENST00000514778 SAMD7Q7Z3H4 446 aa8.6□□□□□ -1.03
SMAD1-213ENST00000514778 APOBEC3FQ8IUX4 373 aaKnown RBP8.6□□□□□ -1.03
SMAD1-213ENST00000514778 NSUN4Q96CB9 384 aaKnown RBP8.6□□□□□ -1.03
SMAD1-213ENST00000514778 BOLA2Q9H3K6 86 aa8.6□□□□□ -1.03
SMAD1-213ENST00000514778 RAI14Q9P0K7 980 aa8.6□□□□□ -1.03
SMAD1-213ENST00000514778 JAG2Q9Y219 1238 aa8.6□□□□□ -1.03
SMAD1-213ENST00000514778 PPP2R3BQ9Y5P8 575 aa8.6□□□□□ -1.03
SMAD1-213ENST00000514778 ADAMTSL1Q8N6G6 1762 aa8.6□□□□□ -1.03
SMAD1-213ENST00000514778 MROH7-TTC4A0A0A0MT08 1334 aa8.59□□□□□ -1.03
SMAD1-213ENST00000514778 F8W031 263 aaPredicted RBP8.59□□□□□ -1.03
SMAD1-213ENST00000514778 BAG3O95817 575 aa8.59□□□□□ -1.03
SMAD1-213ENST00000514778 PPP4CP60510 307 aa8.59□□□□□ -1.03
SMAD1-213ENST00000514778 TNFAIP1Q13829 316 aa8.59□□□□□ -1.03
SMAD1-213ENST00000514778 UBE3CQ15386 1083 aa8.59□□□□□ -1.03
SMAD1-213ENST00000514778 GRIK5Q16478 980 aa8.59□□□□□ -1.03
SMAD1-213ENST00000514778 TBC1D10BQ4KMP7 808 aaPredicted RBP8.59□□□□□ -1.03
SMAD1-213ENST00000514778 PPP1R15BQ5SWA1 713 aa8.59□□□□□ -1.03
SMAD1-213ENST00000514778 APOBEC3HQ6NTF7 200 aaKnown RBP8.59□□□□□ -1.03
SMAD1-213ENST00000514778 POTEEQ6S8J3 1075 aa8.59□□□□□ -1.03
SMAD1-213ENST00000514778 PI16Q6UXB8 463 aa8.59□□□□□ -1.03
SMAD1-213ENST00000514778 CDC37L1Q7L3B6 337 aa8.59□□□□□ -1.03
SMAD1-213ENST00000514778 FAM83AQ86UY5 434 aa8.59□□□□□ -1.03
SMAD1-213ENST00000514778 PLEKHM2Q8IWE5 1019 aa8.59□□□□□ -1.03
SMAD1-213ENST00000514778 KBTBD3Q8NAB2 608 aa8.59□□□□□ -1.03
SMAD1-213ENST00000514778 TRPM4Q8TD43 1214 aa8.59□□□□□ -1.03
SMAD1-213ENST00000514778 DCPSQ96C86 337 aaKnown RBP8.59□□□□□ -1.03
SMAD1-213ENST00000514778 EVI5LQ96CN4 794 aa8.59□□□□□ -1.03
SMAD1-213ENST00000514778 PRMT6Q96LA8 375 aaPredicted RBP8.59□□□□□ -1.03
SMAD1-213ENST00000514778 SNRKQ9NRH2 765 aa8.59□□□□□ -1.03
SMAD1-213ENST00000514778 RFX7Q2KHR2 1363 aa8.59□□□□□ -1.03
SMAD1-213ENST00000514778 GOLIM4O00461 696 aa8.58□□□□□ -1.04
SMAD1-213ENST00000514778 IDH1O75874 414 aaKnown RBP8.58□□□□□ -1.04
SMAD1-213ENST00000514778 EGFRP00533 1210 aa8.58□□□□□ -1.04
SMAD1-213ENST00000514778 TNNI2P48788 182 aa8.58□□□□□ -1.04
SMAD1-213ENST00000514778 RBM5P52756 815 aaKnown RBP eCLIP8.58□□□□□ -1.04
SMAD1-213ENST00000514778 NBPF9Q3BBW0 867 aa8.58□□□□□ -1.04
SMAD1-213ENST00000514778 EAPPQ56P03 285 aaPredicted RBP8.58□□□□□ -1.04
SMAD1-213ENST00000514778 RBM26Q5T8P6 1007 aaKnown RBP8.58□□□□□ -1.04
SMAD1-213ENST00000514778 NAA16Q6N069 864 aaPredicted RBP8.58□□□□□ -1.04
SMAD1-213ENST00000514778 TBC1D9Q6ZT07 1266 aa8.58□□□□□ -1.04
SMAD1-213ENST00000514778 SULF1Q8IWU6 871 aa8.58□□□□□ -1.04
SMAD1-213ENST00000514778 OXER1Q8TDS5 423 aa8.58□□□□□ -1.04
SMAD1-213ENST00000514778 DNAJC2Q99543 621 aaKnown RBP8.58□□□□□ -1.04
SMAD1-213ENST00000514778 NOL10Q9BSC4 688 aaKnown RBP8.58□□□□□ -1.04
SMAD1-213ENST00000514778 PIH1D3Q9NQM4 214 aaKnown RBP8.58□□□□□ -1.04
SMAD1-213ENST00000514778 TMOD2Q9NZR1 351 aa8.58□□□□□ -1.04
SMAD1-213ENST00000514778 DAGLAQ9Y4D2 1042 aa8.58□□□□□ -1.04
SMAD1-213ENST00000514778 AKAP11Q9UKA4 1901 aa8.58□□□□□ -1.04
SMAD1-213ENST00000514778 MYH13Q9UKX3 1938 aa8.58□□□□□ -1.04
SMAD1-213ENST00000514778 SHTN1A0MZ66 631 aa8.57□□□□□ -1.04
SMAD1-213ENST00000514778 ITGBL1O95965 494 aaPredicted RBP8.57□□□□□ -1.04
SMAD1-213ENST00000514778 PDE6AP16499 860 aa8.57□□□□□ -1.04
SMAD1-213ENST00000514778 SLC9C2Q5TAH2 1124 aa8.57□□□□□ -1.04
SMAD1-213ENST00000514778 ANGEL2Q5VTE6 544 aaKnown RBP8.57□□□□□ -1.04
SMAD1-213ENST00000514778 CNTROBQ8N137 903 aa8.57□□□□□ -1.04
SMAD1-213ENST00000514778 OTUD7AQ8TE49 926 aaPredicted RBP8.57□□□□□ -1.04
SMAD1-213ENST00000514778 ZNF384Q8TF68 577 aa8.57□□□□□ -1.04
SMAD1-213ENST00000514778 HOOK2Q96ED9 719 aa8.57□□□□□ -1.04
SMAD1-213ENST00000514778 IDI2Q9BXS1 227 aa8.57□□□□□ -1.04
SMAD1-213ENST00000514778 ANTXR1Q9H6X2 564 aa8.57□□□□□ -1.04
SMAD1-213ENST00000514778 ZNF70Q9UC06 446 aaPredicted RBP8.57□□□□□ -1.04
SMAD1-213ENST00000514778 MAST2Q6P0Q8 1798 aa8.56□□□□□ -1.04
SMAD1-213ENST00000514778 TCRBV5S4A2TA0A5A2 114 aa8.56□□□□□ -1.04
SMAD1-213ENST00000514778 UNCXA6NJT0 531 aa8.56□□□□□ -1.04
SMAD1-213ENST00000514778 HIP1O00291 1037 aa8.56□□□□□ -1.04
SMAD1-213ENST00000514778 ARHGAP33O14559 1287 aa8.56□□□□□ -1.04
SMAD1-213ENST00000514778 ENTPD3O75355 529 aa8.56□□□□□ -1.04
SMAD1-213ENST00000514778 ADD2P35612 726 aa8.56□□□□□ -1.04
SMAD1-213ENST00000514778 FKBP1BP68106 108 aa8.56□□□□□ -1.04
SMAD1-213ENST00000514778 DIXDC1Q155Q3 683 aa8.56□□□□□ -1.04
SMAD1-213ENST00000514778 SUPT20HL1Q3ZLR7 823 aa8.56□□□□□ -1.04
SMAD1-213ENST00000514778 PPP4R3BQ5MIZ7 849 aa8.56□□□□□ -1.04
SMAD1-213ENST00000514778 KRT26Q7Z3Y9 468 aa8.56□□□□□ -1.04
SMAD1-213ENST00000514778 MAGEB6Q8N7X4 407 aa8.56□□□□□ -1.04
SMAD1-213ENST00000514778 BCL11AQ9H165 835 aa8.56□□□□□ -1.04
SMAD1-213ENST00000514778 DEFB129Q9H1M3 183 aa8.56□□□□□ -1.04
SMAD1-213ENST00000514778 USP40Q9NVE5 1235 aa8.56□□□□□ -1.04
SMAD1-213ENST00000514778 GGA3Q9NZ52 723 aa8.56□□□□□ -1.04
SMAD1-213ENST00000514778 RPAP1Q9BWH6 1393 aaPredicted RBP8.56□□□□□ -1.04
SMAD1-213ENST00000514778 PASKQ96RG2 1323 aa8.55□□□□□ -1.04
SMAD1-213ENST00000514778 DOCK2Q92608 1830 aa8.55□□□□□ -1.04
SMAD1-213ENST00000514778 RNF113AO15541 343 aaKnown RBP8.55□□□□□ -1.04
SMAD1-213ENST00000514778 CYP7A1P22680 504 aa8.55□□□□□ -1.04
SMAD1-213ENST00000514778 BTDP43251 543 aa8.55□□□□□ -1.04
SMAD1-213ENST00000514778 RHBDL3P58872 404 aa8.55□□□□□ -1.04
SMAD1-213ENST00000514778 TSHZ3Q63HK5 1081 aa8.55□□□□□ -1.04
SMAD1-213ENST00000514778 MAP1SQ66K74 1059 aaPredicted RBP8.55□□□□□ -1.04
SMAD1-213ENST00000514778 CDC42EP5Q6NZY7 148 aa8.55□□□□□ -1.04
SMAD1-213ENST00000514778 FAM151AQ8WW52 585 aa8.55□□□□□ -1.04
SMAD1-213ENST00000514778 APPBP2Q92624 585 aa8.55□□□□□ -1.04
SMAD1-213ENST00000514778 RIOK1Q9BRS2 568 aaKnown RBP8.55□□□□□ -1.04
SMAD1-213ENST00000514778 TDRD3Q9H7E2 651 aaKnown RBP8.55□□□□□ -1.04
SMAD1-213ENST00000514778 COL2A1P02458 1487 aaPredicted RBP8.55□□□□□ -1.04
SMAD1-213ENST00000514778 ZNF532Q9HCE3 1301 aa8.54□□□□□ -1.04
SMAD1-213ENST00000514778 MAGEB6P1A0A0J9YX57 407 aa8.54□□□□□ -1.04
SMAD1-213ENST00000514778 WDHD1O75717 1129 aaPredicted RBP8.54□□□□□ -1.04
SMAD1-213ENST00000514778 GNAT2P19087 354 aa8.54□□□□□ -1.04
SMAD1-213ENST00000514778 NF2P35240 595 aa8.54□□□□□ -1.04
SMAD1-213ENST00000514778 C1QTNF8P60827 252 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms