RNA–Protein interactions for RNA: ENST00000514693.5

PROM1-217, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-217ENST00000514693 SNAP47Q5SQN1 464 aa6.81□□□□□ -1.32
PROM1-217ENST00000514693 TPTE2Q6XPS3 522 aa6.81□□□□□ -1.32
PROM1-217ENST00000514693 CCDC81Q6ZN84 652 aa6.81□□□□□ -1.32
PROM1-217ENST00000514693 MAP4K3Q8IVH8 894 aa6.81□□□□□ -1.32
PROM1-217ENST00000514693 CELF2-AS1Q8N7Q2 184 aa6.81□□□□□ -1.32
PROM1-217ENST00000514693 CCDC113Q9H0I3 377 aa6.81□□□□□ -1.32
PROM1-217ENST00000514693 MRPL18Q9H0U6 180 aaKnown RBP6.81□□□□□ -1.32
PROM1-217ENST00000514693 ABCB6Q9NP58 842 aa6.81□□□□□ -1.32
PROM1-217ENST00000514693 SUGT1Q9Y2Z0 365 aa6.81□□□□□ -1.32
PROM1-217ENST00000514693 MSRB2Q9Y3D2 182 aa6.81□□□□□ -1.32
PROM1-217ENST00000514693 ESYT3A0FGR9 886 aa6.8□□□□□ -1.32
PROM1-217ENST00000514693 AMPD3Q01432 767 aa6.8□□□□□ -1.32
PROM1-217ENST00000514693 LMNB2Q03252 620 aa6.8□□□□□ -1.32
PROM1-217ENST00000514693 HYAL2Q12891 473 aa6.8□□□□□ -1.32
PROM1-217ENST00000514693 TNNI3KQ59H18 835 aa6.8□□□□□ -1.32
PROM1-217ENST00000514693 HOMER1Q86YM7 354 aa6.8□□□□□ -1.32
PROM1-217ENST00000514693 SLITRK4Q8IW52 837 aa6.8□□□□□ -1.32
PROM1-217ENST00000514693 CACTIN-AS1Q8N1I8 211 aa6.8□□□□□ -1.32
PROM1-217ENST00000514693 FAM169BQ8N8A8 192 aa6.8□□□□□ -1.32
PROM1-217ENST00000514693 MUC3BQ9H195 1237 aa6.8□□□□□ -1.32
PROM1-217ENST00000514693 LIN7BQ9HAP6 207 aa6.8□□□□□ -1.32
PROM1-217ENST00000514693 DDX56Q9NY93 547 aaKnown RBP6.8□□□□□ -1.32
PROM1-217ENST00000514693 SALL4Q9UJQ4 1053 aa6.8□□□□□ -1.32
PROM1-217ENST00000514693 PPT2Q9UMR5 302 aa6.8□□□□□ -1.32
PROM1-217ENST00000514693 TRIM33Q9UPN9 1127 aa6.8□□□□□ -1.32
PROM1-217ENST00000514693 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.79□□□□□ -1.32
PROM1-217ENST00000514693 CELA3AP09093 270 aa6.79□□□□□ -1.32
PROM1-217ENST00000514693 GYS2P54840 703 aa6.79□□□□□ -1.32
PROM1-217ENST00000514693 IFRD2Q12894 506 aaPredicted RBP6.79□□□□□ -1.32
PROM1-217ENST00000514693 LRP8Q14114 963 aa6.79□□□□□ -1.32
PROM1-217ENST00000514693 ARSHQ5FYA8 562 aa6.79□□□□□ -1.32
PROM1-217ENST00000514693 KIAA0907Q7Z7F0 614 aaPredicted RBP6.79□□□□□ -1.32
PROM1-217ENST00000514693 OR13H1Q8NG92 308 aa6.79□□□□□ -1.32
PROM1-217ENST00000514693 MEGF10Q96KG7 1140 aa6.79□□□□□ -1.32
PROM1-217ENST00000514693 KRTAP9-2Q9BYQ4 174 aa6.79□□□□□ -1.32
PROM1-217ENST00000514693 IRF2BPLQ9H1B7 796 aa6.79□□□□□ -1.32
PROM1-217ENST00000514693 TMX1Q9H3N1 280 aa6.79□□□□□ -1.32
PROM1-217ENST00000514693 ST7Q9NRC1 585 aa6.79□□□□□ -1.32
PROM1-217ENST00000514693 SLC52A1Q9NWF4 448 aa6.79□□□□□ -1.32
PROM1-217ENST00000514693 CHPF2Q9P2E5 772 aa6.79□□□□□ -1.32
PROM1-217ENST00000514693 FAM177BA6PVY3 158 aa6.78□□□□□ -1.32
PROM1-217ENST00000514693 SMNDC1O75940 238 aaKnown RBP eCLIP6.78□□□□□ -1.32
PROM1-217ENST00000514693 TFE3P19532 575 aaPredicted RBP6.78□□□□□ -1.32
PROM1-217ENST00000514693 EIF6P56537 245 aaKnown RBP6.78□□□□□ -1.32
PROM1-217ENST00000514693 SEZ6Q53EL9 994 aa6.78□□□□□ -1.32
PROM1-217ENST00000514693 FAM196AQ6ZSG2 479 aa6.78□□□□□ -1.32
PROM1-217ENST00000514693 STAG1Q8WVM7 1258 aa6.78□□□□□ -1.32
PROM1-217ENST00000514693 TCF12Q99081 682 aa6.78□□□□□ -1.32
PROM1-217ENST00000514693 CEP44Q9C0F1 390 aa6.78□□□□□ -1.32
PROM1-217ENST00000514693 PDPK1O15530 556 aa6.77□□□□□ -1.33
PROM1-217ENST00000514693 ALX3O95076 343 aa6.77□□□□□ -1.33
PROM1-217ENST00000514693 SETDB1Q15047 1291 aa6.77□□□□□ -1.33
PROM1-217ENST00000514693 DDR2Q16832 855 aa6.77□□□□□ -1.33
PROM1-217ENST00000514693 CEP135Q66GS9 1140 aa6.77□□□□□ -1.33
PROM1-217ENST00000514693 AGMOQ6ZNB7 445 aa6.77□□□□□ -1.33
PROM1-217ENST00000514693 PRR23CQ6ZRP0 262 aa6.77□□□□□ -1.33
PROM1-217ENST00000514693 TMEM130Q8N3G9 435 aa6.77□□□□□ -1.33
PROM1-217ENST00000514693 LACRTQ9GZZ8 138 aa6.77□□□□□ -1.33
PROM1-217ENST00000514693 G3BP2Q9UN86 482 aaKnown RBP6.77□□□□□ -1.33
PROM1-217ENST00000514693 F8W735 103 aaPredicted RBP6.76□□□□□ -1.33
PROM1-217ENST00000514693 TLR3O15455 904 aaKnown RBP6.76□□□□□ -1.33
PROM1-217ENST00000514693 S100BP04271 92 aaPredicted RBP6.76□□□□□ -1.33
PROM1-217ENST00000514693 GLB1P16278 677 aa6.76□□□□□ -1.33
PROM1-217ENST00000514693 GIPRP48546 466 aa6.76□□□□□ -1.33
PROM1-217ENST00000514693 SQSTM1Q13501 440 aa6.76□□□□□ -1.33
PROM1-217ENST00000514693 RASGRF1Q13972 1273 aa6.76□□□□□ -1.33
PROM1-217ENST00000514693 HSP90AB2PQ58FF8 381 aa6.76□□□□□ -1.33
PROM1-217ENST00000514693 TTBK2Q6IQ55 1244 aa6.76□□□□□ -1.33
PROM1-217ENST00000514693 C16orf86Q6ZW13 317 aa6.76□□□□□ -1.33
PROM1-217ENST00000514693 NCAPG2Q86XI2 1143 aa6.76□□□□□ -1.33
PROM1-217ENST00000514693 CCNJLQ8IV13 435 aa6.76□□□□□ -1.33
PROM1-217ENST00000514693 FBXO27Q8NI29 283 aa6.76□□□□□ -1.33
PROM1-217ENST00000514693 CRBNQ96SW2 442 aa6.76□□□□□ -1.33
PROM1-217ENST00000514693 ZFYVE1Q9HBF4 777 aa6.76□□□□□ -1.33
PROM1-217ENST00000514693 TMEM260Q9NX78 707 aa6.76□□□□□ -1.33
PROM1-217ENST00000514693 ACTR10Q9NZ32 417 aa6.76□□□□□ -1.33
PROM1-217ENST00000514693 LEMD3Q9Y2U8 911 aa6.76□□□□□ -1.33
PROM1-217ENST00000514693 ROBO2Q9HCK4 1378 aa6.76□□□□□ -1.33
PROM1-217ENST00000514693 LINC01387J3KSC0 135 aa6.75□□□□□ -1.33
PROM1-217ENST00000514693 ENC1O14682 589 aa6.75□□□□□ -1.33
PROM1-217ENST00000514693 TRIM37O94972 964 aa6.75□□□□□ -1.33
PROM1-217ENST00000514693 CDC27P30260 824 aa6.75□□□□□ -1.33
PROM1-217ENST00000514693 MCM4P33991 863 aa6.75□□□□□ -1.33
PROM1-217ENST00000514693 MASP1P48740 699 aa6.75□□□□□ -1.33
PROM1-217ENST00000514693 ATP11AP98196 1134 aa6.75□□□□□ -1.33
PROM1-217ENST00000514693 FBXW10Q5XX13 1052 aa6.75□□□□□ -1.33
PROM1-217ENST00000514693 FAM117BQ6P1L5 589 aa6.75□□□□□ -1.33
PROM1-217ENST00000514693 BNC2Q6ZN30 1099 aaPredicted RBP6.75□□□□□ -1.33
PROM1-217ENST00000514693 DZIP1LQ8IYY4 767 aaKnown RBP6.75□□□□□ -1.33
PROM1-217ENST00000514693 FERD3LQ96RJ6 166 aa6.75□□□□□ -1.33
PROM1-217ENST00000514693 OSMRQ99650 979 aa6.75□□□□□ -1.33
PROM1-217ENST00000514693 ZKSCAN3Q9BRR0 538 aa6.75□□□□□ -1.33
PROM1-217ENST00000514693 DZANK1Q9NVP4 752 aa6.75□□□□□ -1.33
PROM1-217ENST00000514693 MAPK8IP1Q9UQF2 711 aa6.75□□□□□ -1.33
PROM1-217ENST00000514693 FAN1Q9Y2M0 1017 aa6.75□□□□□ -1.33
PROM1-217ENST00000514693 KRTAP9-6A0A140TA67 174 aa6.74□□□□□ -1.33
PROM1-217ENST00000514693 HYAL3O43820 417 aaPredicted RBP6.74□□□□□ -1.33
PROM1-217ENST00000514693 F13A1P00488 732 aa6.74□□□□□ -1.33
PROM1-217ENST00000514693 CDC25BP30305 580 aa6.74□□□□□ -1.33
PROM1-217ENST00000514693 GRIA4P48058 902 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms