RNA–Protein interactions for RNA: ENST00000514654.5

ATP2C1-222, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2C1, Length 4,730 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-222ENST00000514654 ERCC3P19447 782 aa7□□□□□ -1.29
ATP2C1-222ENST00000514654 CCT6AP40227 531 aaKnown RBP7□□□□□ -1.29
ATP2C1-222ENST00000514654 TXKP42681 527 aa7□□□□□ -1.29
ATP2C1-222ENST00000514654 SCNN1DP51172 638 aa7□□□□□ -1.29
ATP2C1-222ENST00000514654 PTPN12Q05209 780 aaKnown RBP7□□□□□ -1.29
ATP2C1-222ENST00000514654 PRKG1Q13976 671 aa7□□□□□ -1.29
ATP2C1-222ENST00000514654 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7□□□□□ -1.29
ATP2C1-222ENST00000514654 BCORL1Q5H9F3 1711 aa7□□□□□ -1.29
ATP2C1-222ENST00000514654 ELP1O95163 1332 aa7□□□□□ -1.29
ATP2C1-222ENST00000514654 ARHGAP31Q2M1Z3 1444 aa6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 KARSQ15046 597 aaKnown RBP6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 SLFNL1Q499Z3 407 aa6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 GPIHBP1Q8IV16 184 aa6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 SYNE4Q8N205 404 aa6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 C17orf53Q8N3J3 647 aaPredicted RBP6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 TET3O43151 1660 aa6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 ZNF202O95125 648 aa6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 CYP21A2P08686 494 aa6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 UBXN1Q04323 297 aa6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 SPAG1Q07617 926 aa6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 PPP4R3BQ5MIZ7 849 aa6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 FAM196AQ6ZSG2 479 aa6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 STXBP4Q6ZWJ1 553 aa6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 ZNF654Q8IZM8 581 aa6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 MAP4K1Q92918 833 aa6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 TTF2Q9UNY4 1162 aaKnown RBP6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 MAP3K4Q9Y6R4 1608 aa6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 SPDYE4A6NLX3 237 aa6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 CHMP2AO43633 222 aa6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 CCNT1O60563 726 aaKnown RBP6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 TRIM37O94972 964 aa6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 CLCN1P35523 988 aa6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 IL6STP40189 918 aaPredicted RBP6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 TTC38Q5R3I4 469 aa6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 NLRP10Q86W26 655 aa6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 CTAGE1Q96RT6 745 aa6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 USP28Q96RU2 1077 aa6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 LZTFL1Q9NQ48 299 aa6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 MTMR6Q9Y217 621 aa6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 CDK12Q9NYV4 1490 aaPredicted RBP6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 SLC1A4P43007 532 aa6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 MRPL12P52815 198 aaKnown RBP6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 KIAA0825Q8IV33 1275 aa6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 DHX37Q8IY37 1157 aaKnown RBP6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 FNBP4Q8N3X1 1017 aaPredicted RBP6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 CLSTN2Q9H4D0 955 aa6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 OSBPL3Q9H4L5 887 aa6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 QTRT2Q9H974 415 aaKnown RBP6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 USP40Q9NVE5 1235 aa6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.99□□□□□ -1.29
ATP2C1-222ENST00000514654 ANKRD62A6NC57 917 aa6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 IGKV5-2P06315 115 aa6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 GOLGA8HP0CJ92 632 aa6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 MYL5Q02045 173 aa6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 HLTFQ14527 1009 aaKnown RBP eCLIP6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 HLFQ16534 295 aa6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 ERFEQ4G0M1 354 aa6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 ATL3Q6DD88 541 aa6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 CCDC174Q6PII3 467 aa6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 CPXCR1Q8N123 301 aa6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 TCHPQ9BT92 498 aa6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 CBX8Q9HC52 389 aa6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 SRP68Q9UHB9 627 aaKnown RBP6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 IQGAP3Q86VI3 1631 aa6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 CLASP1Q7Z460 1538 aa6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 SETD1BQ9UPS6 1966 aaKnown RBP6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 ARID4AP29374 1257 aaPredicted RBP6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 RAD51AP2Q09MP3 1159 aa6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 USH1GQ495M9 461 aa6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 ALS2CR12Q96Q35 445 aa6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 CCDC113Q9H0I3 377 aa6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 VPS16Q9H269 839 aa6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 ADCY10Q96PN6 1610 aa6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 SPATA31A3Q5VYP0 1347 aa6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 HEG1Q9ULI3 1381 aa6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 PRKAB2O43741 272 aa6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 WDHD1O75717 1129 aaPredicted RBP6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 TRAF1Q13077 416 aa6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 SEPT7Q16181 437 aaKnown RBP6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 MYSM1Q5VVJ2 828 aa6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 CWC15Q9P013 229 aaKnown RBP6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 TNKSO95271 1327 aa6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 M0R2C6 588 aa6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 FAM13AO94988 1023 aa6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 GOPCQ9HD26 462 aa6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 CTNND2Q9UQB3 1225 aa6.98□□□□□ -1.29
ATP2C1-222ENST00000514654 BTBD18B2RXH4 712 aa6.97□□□□□ -1.29
ATP2C1-222ENST00000514654 PPIP5K2O43314 1243 aa6.97□□□□□ -1.29
ATP2C1-222ENST00000514654 DYNLL1P63167 89 aaKnown RBP6.97□□□□□ -1.29
ATP2C1-222ENST00000514654 SCRN1Q12765 414 aa6.97□□□□□ -1.29
ATP2C1-222ENST00000514654 ZMYM1Q5SVZ6 1142 aa6.97□□□□□ -1.29
ATP2C1-222ENST00000514654 OSBP2Q969R2 916 aa6.97□□□□□ -1.29
ATP2C1-222ENST00000514654 GBP3Q9H0R5 595 aa6.97□□□□□ -1.29
ATP2C1-222ENST00000514654 MAST3O60307 1309 aa6.97□□□□□ -1.29
ATP2C1-222ENST00000514654 GOLGA6L9A6NEM1 432 aa6.97□□□□□ -1.29
ATP2C1-222ENST00000514654 RRP9O43818 475 aaKnown RBP6.97□□□□□ -1.29
ATP2C1-222ENST00000514654 PDIA3P30101 505 aaKnown RBP6.97□□□□□ -1.29
ATP2C1-222ENST00000514654 CYLC1P35663 651 aaPredicted RBP6.97□□□□□ -1.29
ATP2C1-222ENST00000514654 CETN2P41208 172 aa6.97□□□□□ -1.29
ATP2C1-222ENST00000514654 PDE4DQ08499 809 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms