RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 JMYQ8N9B5 988 aa10.05□□□□□ -0.8
CCL28-204ENST00000514421 OTUD7AQ8TE49 926 aaPredicted RBP10.05□□□□□ -0.8
CCL28-204ENST00000514421 EDC3Q96F86 508 aaKnown RBP10.05□□□□□ -0.8
CCL28-204ENST00000514421 CAPNS2Q96L46 248 aa10.05□□□□□ -0.8
CCL28-204ENST00000514421 IPO9Q96P70 1041 aaKnown RBP10.05□□□□□ -0.8
CCL28-204ENST00000514421 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.05□□□□□ -0.8
CCL28-204ENST00000514421 AATFQ9NY61 560 aaKnown RBP eCLIP10.05□□□□□ -0.8
CCL28-204ENST00000514421 STAP2Q9UGK3 403 aa10.05□□□□□ -0.8
CCL28-204ENST00000514421 CEP350Q5VT06 3117 aa10.04□□□□□ -0.8
CCL28-204ENST00000514421 PDE6AP16499 860 aa10.04□□□□□ -0.8
CCL28-204ENST00000514421 MAP2K2P36507 400 aa10.04□□□□□ -0.8
CCL28-204ENST00000514421 MAP3K9P80192 1104 aa10.04□□□□□ -0.8
CCL28-204ENST00000514421 UBE3CQ15386 1083 aa10.04□□□□□ -0.8
CCL28-204ENST00000514421 BMP2KLQ5H9B9 411 aa10.04□□□□□ -0.8
CCL28-204ENST00000514421 DCAF15Q66K64 600 aa10.04□□□□□ -0.8
CCL28-204ENST00000514421 ADGRA1Q86SQ6 560 aa10.04□□□□□ -0.8
CCL28-204ENST00000514421 PI4K2BQ8TCG2 481 aa10.04□□□□□ -0.8
CCL28-204ENST00000514421 SH3RF3Q8TEJ3 882 aaPredicted RBP10.04□□□□□ -0.8
CCL28-204ENST00000514421 SLC10A4Q96EP9 437 aa10.04□□□□□ -0.8
CCL28-204ENST00000514421 LNPKQ9C0E8 428 aa10.04□□□□□ -0.8
CCL28-204ENST00000514421 ZNF646O15015 1829 aaPredicted RBP10.04□□□□□ -0.8
CCL28-204ENST00000514421 ZNF532Q9HCE3 1301 aa10.04□□□□□ -0.8
CCL28-204ENST00000514421 MAGEB6P1A0A0J9YX57 407 aa10.03□□□□□ -0.8
CCL28-204ENST00000514421 TCRBV5S4A2TA0A5A2 114 aa10.03□□□□□ -0.8
CCL28-204ENST00000514421 ADD2P35612 726 aa10.03□□□□□ -0.8
CCL28-204ENST00000514421 PDE1AP54750 535 aa10.03□□□□□ -0.8
CCL28-204ENST00000514421 DYNLL1P63167 89 aaKnown RBP10.03□□□□□ -0.8
CCL28-204ENST00000514421 NOGQ13253 232 aa10.03□□□□□ -0.8
CCL28-204ENST00000514421 GRM1Q13255 1194 aa10.03□□□□□ -0.8
CCL28-204ENST00000514421 PICALMQ13492 652 aa10.03□□□□□ -0.8
CCL28-204ENST00000514421 LRRFIP1Q32MZ4 808 aaKnown RBP10.03□□□□□ -0.8
CCL28-204ENST00000514421 TSHZ3Q63HK5 1081 aa10.03□□□□□ -0.8
CCL28-204ENST00000514421 MIGA2Q7L4E1 593 aa10.03□□□□□ -0.8
CCL28-204ENST00000514421 ZSCAN29Q8IWY8 852 aaPredicted RBP10.03□□□□□ -0.8
CCL28-204ENST00000514421 CDAN1Q8IWY9 1227 aa10.03□□□□□ -0.8
CCL28-204ENST00000514421 ANKRD13AQ8IZ07 590 aa10.03□□□□□ -0.8
CCL28-204ENST00000514421 MIGA1Q8NAN2 632 aa10.03□□□□□ -0.8
CCL28-204ENST00000514421 TGFBRAP1Q8WUH2 860 aa10.03□□□□□ -0.8
CCL28-204ENST00000514421 ZNF341Q9BYN7 854 aa10.03□□□□□ -0.8
CCL28-204ENST00000514421 DDX4Q9NQI0 724 aaKnown RBP10.03□□□□□ -0.8
CCL28-204ENST00000514421 FZD1Q9UP38 647 aa10.03□□□□□ -0.8
CCL28-204ENST00000514421 SALL3Q9BXA9 1300 aa10.03□□□□□ -0.8
CCL28-204ENST00000514421 ARAP2Q8WZ64 1704 aa10.02□□□□□ -0.8
CCL28-204ENST00000514421 DDTLA6NHG4 134 aaPredicted RBP10.02□□□□□ -0.81
CCL28-204ENST00000514421 MAP3K10Q02779 954 aa10.02□□□□□ -0.81
CCL28-204ENST00000514421 SH3BP5LQ7L8J4 393 aa10.02□□□□□ -0.81
CCL28-204ENST00000514421 FOXP4Q8IVH2 680 aaPredicted RBP10.02□□□□□ -0.81
CCL28-204ENST00000514421 KBTBD3Q8NAB2 608 aa10.02□□□□□ -0.81
CCL28-204ENST00000514421 CSRNP1Q96S65 589 aa10.02□□□□□ -0.81
CCL28-204ENST00000514421 RIOK1Q9BRS2 568 aaKnown RBP10.02□□□□□ -0.81
CCL28-204ENST00000514421 OSBPL5Q9H0X9 879 aaPredicted RBP10.02□□□□□ -0.81
CCL28-204ENST00000514421 DHX36Q9H2U1 1008 aaKnown RBP10.02□□□□□ -0.81
CCL28-204ENST00000514421 AKAP11Q9UKA4 1901 aa10.01□□□□□ -0.81
CCL28-204ENST00000514421 FAM155AB1AL88 458 aaPredicted RBP10.01□□□□□ -0.81
CCL28-204ENST00000514421 RNF113AO15541 343 aaKnown RBP10.01□□□□□ -0.81
CCL28-204ENST00000514421 TBC1D12O60347 775 aa10.01□□□□□ -0.81
CCL28-204ENST00000514421 AOC2O75106 756 aa10.01□□□□□ -0.81
CCL28-204ENST00000514421 ZFYP08048 801 aaPredicted RBP10.01□□□□□ -0.81
CCL28-204ENST00000514421 SLC10A3P09131 477 aa10.01□□□□□ -0.81
CCL28-204ENST00000514421 USP5P45974 858 aa10.01□□□□□ -0.81
CCL28-204ENST00000514421 KIF23Q02241 960 aaPredicted RBP10.01□□□□□ -0.81
CCL28-204ENST00000514421 MAP2K1Q02750 393 aaPredicted RBP10.01□□□□□ -0.81
CCL28-204ENST00000514421 TICAM2Q86XR7 235 aa10.01□□□□□ -0.81
CCL28-204ENST00000514421 MAPKAPK5Q8IW41 473 aa10.01□□□□□ -0.81
CCL28-204ENST00000514421 PLEKHM2Q8IWE5 1019 aa10.01□□□□□ -0.81
CCL28-204ENST00000514421 REM2Q8IYK8 340 aaPredicted RBP10.01□□□□□ -0.81
CCL28-204ENST00000514421 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.01□□□□□ -0.81
CCL28-204ENST00000514421 EVI5LQ96CN4 794 aa10.01□□□□□ -0.81
CCL28-204ENST00000514421 CRNKL1Q9BZJ0 848 aaKnown RBP10.01□□□□□ -0.81
CCL28-204ENST00000514421 OSBPL3Q9H4L5 887 aa10.01□□□□□ -0.81
CCL28-204ENST00000514421 PI4KBQ9UBF8 816 aa10.01□□□□□ -0.81
CCL28-204ENST00000514421 ZNF112Q9UJU3 913 aa10.01□□□□□ -0.81
CCL28-204ENST00000514421 RPAP1Q9BWH6 1393 aaPredicted RBP10.01□□□□□ -0.81
CCL28-204ENST00000514421 SLFNL1Q499Z3 407 aa10□□□□□ -0.81
CCL28-204ENST00000514421 PPP1R3FQ6ZSY5 799 aaPredicted RBP10□□□□□ -0.81
CCL28-204ENST00000514421 DDRGK1Q96HY6 314 aa10□□□□□ -0.81
CCL28-204ENST00000514421 CLMNQ96JQ2 1002 aa10□□□□□ -0.81
CCL28-204ENST00000514421 ZIC5Q96T25 663 aa10□□□□□ -0.81
CCL28-204ENST00000514421 WBP1LQ9NX94 342 aa10□□□□□ -0.81
CCL28-204ENST00000514421 ZBTB4Q9P1Z0 1013 aaPredicted RBP10□□□□□ -0.81
CCL28-204ENST00000514421 CSADQ9Y600 493 aa10□□□□□ -0.81
CCL28-204ENST00000514421 PHF20L1A8MW92 1017 aa9.99□□□□□ -0.81
CCL28-204ENST00000514421 MBD4O95243 580 aa9.99□□□□□ -0.81
CCL28-204ENST00000514421 SEC24BO95487 1268 aa9.99□□□□□ -0.81
CCL28-204ENST00000514421 INHBEP58166 350 aa9.99□□□□□ -0.81
CCL28-204ENST00000514421 SPRYD7Q5W111 196 aa9.99□□□□□ -0.81
CCL28-204ENST00000514421 TTC6Q86TZ1 520 aa9.99□□□□□ -0.81
CCL28-204ENST00000514421 RASAL3Q86YV0 1011 aa9.99□□□□□ -0.81
CCL28-204ENST00000514421 ZKSCAN4Q969J2 545 aaPredicted RBP9.99□□□□□ -0.81
CCL28-204ENST00000514421 AIDAQ96BJ3 306 aa9.99□□□□□ -0.81
CCL28-204ENST00000514421 TBC1D32Q96NH3 1257 aa9.99□□□□□ -0.81
CCL28-204ENST00000514421 WRNIP1Q96S55 665 aa9.99□□□□□ -0.81
CCL28-204ENST00000514421 FSD1Q9BTV5 496 aa9.99□□□□□ -0.81
CCL28-204ENST00000514421 PUS7LQ9H0K6 701 aaKnown RBP9.99□□□□□ -0.81
CCL28-204ENST00000514421 ARMT1Q9H993 441 aa9.99□□□□□ -0.81
CCL28-204ENST00000514421 ELP3Q9H9T3 547 aa9.99□□□□□ -0.81
CCL28-204ENST00000514421 HERC5Q9UII4 1024 aaKnown RBP9.99□□□□□ -0.81
CCL28-204ENST00000514421 TRPM7Q96QT4 1865 aa9.99□□□□□ -0.81
CCL28-204ENST00000514421 FLT1P17948 1338 aa9.99□□□□□ -0.81
CCL28-204ENST00000514421 RFX7Q2KHR2 1363 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms