RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 THAP3Q8WTV1 239 aaPredicted RBP7.08□□□□□ -1.28
CALCOCO2-222ENST00000514006 TMEM40Q8WWA1 233 aa7.08□□□□□ -1.28
CALCOCO2-222ENST00000514006 SLC7A3Q8WY07 619 aa7.08□□□□□ -1.28
CALCOCO2-222ENST00000514006 CORO1BQ9BR76 489 aa7.08□□□□□ -1.28
CALCOCO2-222ENST00000514006 ANTXR1Q9H6X2 564 aa7.08□□□□□ -1.28
CALCOCO2-222ENST00000514006 PCDH12Q9NPG4 1184 aa7.08□□□□□ -1.28
CALCOCO2-222ENST00000514006 CACNA2D2Q9NY47 1150 aa7.08□□□□□ -1.28
CALCOCO2-222ENST00000514006 KLF15Q9UIH9 416 aa7.08□□□□□ -1.28
CALCOCO2-222ENST00000514006 LEMD3Q9Y2U8 911 aa7.08□□□□□ -1.28
CALCOCO2-222ENST00000514006 KDM2BQ8NHM5 1336 aa7.07□□□□□ -1.28
CALCOCO2-222ENST00000514006 PRR36Q9H6K5 1346 aa7.07□□□□□ -1.28
CALCOCO2-222ENST00000514006 B2RBV5 119 aa7.07□□□□□ -1.28
CALCOCO2-222ENST00000514006 CDK8P49336 464 aa7.07□□□□□ -1.28
CALCOCO2-222ENST00000514006 HNRNPUQ00839 825 aaKnown RBP eCLIP7.07□□□□□ -1.28
CALCOCO2-222ENST00000514006 C19orf57Q0VDD7 668 aa7.07□□□□□ -1.28
CALCOCO2-222ENST00000514006 FAM117BQ6P1L5 589 aa7.07□□□□□ -1.28
CALCOCO2-222ENST00000514006 IL22RA1Q8N6P7 574 aa7.07□□□□□ -1.28
CALCOCO2-222ENST00000514006 ZSCAN1Q8NBB4 408 aa7.07□□□□□ -1.28
CALCOCO2-222ENST00000514006 ST13P5Q8NFI4 369 aaPredicted RBP7.07□□□□□ -1.28
CALCOCO2-222ENST00000514006 FEZ1Q99689 392 aa7.07□□□□□ -1.28
CALCOCO2-222ENST00000514006 KRT82Q9NSB4 513 aa7.07□□□□□ -1.28
CALCOCO2-222ENST00000514006 PFDN2Q9UHV9 154 aa7.07□□□□□ -1.28
CALCOCO2-222ENST00000514006 NSFL1CQ9UNZ2 370 aaKnown RBP7.07□□□□□ -1.28
CALCOCO2-222ENST00000514006 SLC12A7Q9Y666 1083 aa7.07□□□□□ -1.28
CALCOCO2-222ENST00000514006 SNCAIPQ9Y6H5 919 aa7.07□□□□□ -1.28
CALCOCO2-222ENST00000514006 ELOA3CA0A087WX78 387 aaPredicted RBP7.06□□□□□ -1.28
CALCOCO2-222ENST00000514006 ELOA3DA6NLF2 546 aaPredicted RBP7.06□□□□□ -1.28
CALCOCO2-222ENST00000514006 NEURL1BA8MQ27 555 aa7.06□□□□□ -1.28
CALCOCO2-222ENST00000514006 GFRA2O00451 464 aa7.06□□□□□ -1.28
CALCOCO2-222ENST00000514006 GYS2P54840 703 aa7.06□□□□□ -1.28
CALCOCO2-222ENST00000514006 PIP4K2BP78356 416 aa7.06□□□□□ -1.28
CALCOCO2-222ENST00000514006 SSRP1Q08945 709 aaKnown RBP7.06□□□□□ -1.28
CALCOCO2-222ENST00000514006 POU4F3Q15319 338 aa7.06□□□□□ -1.28
CALCOCO2-222ENST00000514006 ELOA3BQ3SY89 546 aa7.06□□□□□ -1.28
CALCOCO2-222ENST00000514006 HGSNATQ68CP4 663 aa7.06□□□□□ -1.28
CALCOCO2-222ENST00000514006 HDXQ7Z353 690 aa7.06□□□□□ -1.28
CALCOCO2-222ENST00000514006 FCHSD1Q86WN1 690 aa7.06□□□□□ -1.28
CALCOCO2-222ENST00000514006 TAB3Q8N5C8 712 aaPredicted RBP7.06□□□□□ -1.28
CALCOCO2-222ENST00000514006 ELOA3Q8NG57 546 aa7.06□□□□□ -1.28
CALCOCO2-222ENST00000514006 NUDT8Q8WV74 236 aa7.06□□□□□ -1.28
CALCOCO2-222ENST00000514006 NANOS1Q8WY41 292 aaKnown RBP7.06□□□□□ -1.28
CALCOCO2-222ENST00000514006 PLPPR2Q96GM1 343 aa7.06□□□□□ -1.28
CALCOCO2-222ENST00000514006 MDFIQ99750 246 aa7.06□□□□□ -1.28
CALCOCO2-222ENST00000514006 GMIPQ9P107 970 aa7.06□□□□□ -1.28
CALCOCO2-222ENST00000514006 GMPR2Q9P2T1 348 aaKnown RBP7.06□□□□□ -1.28
CALCOCO2-222ENST00000514006 PPME1Q9Y570 386 aa7.06□□□□□ -1.28
CALCOCO2-222ENST00000514006 MARCH6O60337 910 aa7.05□□□□□ -1.28
CALCOCO2-222ENST00000514006 DIAPH1O60610 1272 aaKnown RBP7.05□□□□□ -1.28
CALCOCO2-222ENST00000514006 SELPP16109 830 aa7.05□□□□□ -1.28
CALCOCO2-222ENST00000514006 ALAS2P22557 587 aa7.05□□□□□ -1.28
CALCOCO2-222ENST00000514006 LRFN4Q6PJG9 635 aa7.05□□□□□ -1.28
CALCOCO2-222ENST00000514006 TXNDC11Q6PKC3 985 aa7.05□□□□□ -1.28
CALCOCO2-222ENST00000514006 SPATC1Q76KD6 591 aa7.05□□□□□ -1.28
CALCOCO2-222ENST00000514006 JMYQ8N9B5 988 aa7.05□□□□□ -1.28
CALCOCO2-222ENST00000514006 WNT8BQ93098 351 aa7.05□□□□□ -1.28
CALCOCO2-222ENST00000514006 ELMO3Q96BJ8 720 aa7.05□□□□□ -1.28
CALCOCO2-222ENST00000514006 ZNF669Q96BR6 464 aaPredicted RBP7.05□□□□□ -1.28
CALCOCO2-222ENST00000514006 METTL14Q9HCE5 456 aaKnown RBP7.05□□□□□ -1.28
CALCOCO2-222ENST00000514006 REV1Q9UBZ9 1251 aa7.05□□□□□ -1.28
CALCOCO2-222ENST00000514006 ZMYM5Q9UJ78 669 aa7.05□□□□□ -1.28
CALCOCO2-222ENST00000514006 CORINQ9Y5Q5 1042 aa7.05□□□□□ -1.28
CALCOCO2-222ENST00000514006 PTCH2Q9Y6C5 1203 aa7.05□□□□□ -1.28
CALCOCO2-222ENST00000514006 LINC01387J3KSC0 135 aa7.04□□□□□ -1.28
CALCOCO2-222ENST00000514006 PLCG1P19174 1290 aa7.04□□□□□ -1.28
CALCOCO2-222ENST00000514006 MAP2K3P46734 347 aa7.04□□□□□ -1.28
CALCOCO2-222ENST00000514006 PDE4BQ07343 736 aa7.04□□□□□ -1.28
CALCOCO2-222ENST00000514006 PDE3AQ14432 1141 aa7.04□□□□□ -1.28
CALCOCO2-222ENST00000514006 INPP5AQ14642 412 aa7.04□□□□□ -1.28
CALCOCO2-222ENST00000514006 OVOS1Q6IE37 1185 aa7.04□□□□□ -1.28
CALCOCO2-222ENST00000514006 MRM1Q6IN84 353 aaKnown RBP7.04□□□□□ -1.28
CALCOCO2-222ENST00000514006 EEPD1Q7L9B9 569 aa7.04□□□□□ -1.28
CALCOCO2-222ENST00000514006 CCDC86Q9H6F5 360 aaKnown RBP7.04□□□□□ -1.28
CALCOCO2-222ENST00000514006 JPH1Q9HDC5 661 aaPredicted RBP7.04□□□□□ -1.28
CALCOCO2-222ENST00000514006 OSGEPQ9NPF4 335 aa7.04□□□□□ -1.28
CALCOCO2-222ENST00000514006 TACC3Q9Y6A5 838 aa7.04□□□□□ -1.28
CALCOCO2-222ENST00000514006 UPK3BL1B0FP48 263 aa7.03□□□□□ -1.28
CALCOCO2-222ENST00000514006 UPK3BL2E5RIL1 263 aa7.03□□□□□ -1.28
CALCOCO2-222ENST00000514006 ECEL1O95672 775 aa7.03□□□□□ -1.28
CALCOCO2-222ENST00000514006 SNRPBP14678 240 aaKnown RBP7.03□□□□□ -1.28
CALCOCO2-222ENST00000514006 MAOBP27338 520 aa7.03□□□□□ -1.28
CALCOCO2-222ENST00000514006 NCAPHQ15003 741 aa7.03□□□□□ -1.28
CALCOCO2-222ENST00000514006 TCEA2Q15560 299 aa7.03□□□□□ -1.28
CALCOCO2-222ENST00000514006 INTS3Q68E01 1043 aaKnown RBP7.03□□□□□ -1.28
CALCOCO2-222ENST00000514006 VHLLQ6RSH7 139 aa7.03□□□□□ -1.28
CALCOCO2-222ENST00000514006 UNC5AQ6ZN44 842 aa7.03□□□□□ -1.28
CALCOCO2-222ENST00000514006 NLRC3Q7RTR2 1065 aa7.03□□□□□ -1.28
CALCOCO2-222ENST00000514006 SYNPOQ8N3V7 929 aa7.03□□□□□ -1.28
CALCOCO2-222ENST00000514006 ATG4CQ96DT6 458 aa7.03□□□□□ -1.28
CALCOCO2-222ENST00000514006 NRSN2Q9GZP1 204 aa7.03□□□□□ -1.28
CALCOCO2-222ENST00000514006 CWC22Q9HCG8 908 aaKnown RBP7.03□□□□□ -1.28
CALCOCO2-222ENST00000514006 GGA1Q9UJY5 639 aa7.03□□□□□ -1.28
CALCOCO2-222ENST00000514006 SLC22A31A6NKX4 558 aa7.02□□□□□ -1.29
CALCOCO2-222ENST00000514006 FSCN2O14926 492 aa7.02□□□□□ -1.29
CALCOCO2-222ENST00000514006 ASMTLO95671 621 aa7.02□□□□□ -1.29
CALCOCO2-222ENST00000514006 NME1P15531 152 aaKnown RBP7.02□□□□□ -1.29
CALCOCO2-222ENST00000514006 GAS6Q14393 721 aa7.02□□□□□ -1.29
CALCOCO2-222ENST00000514006 GRIK5Q16478 980 aa7.02□□□□□ -1.29
CALCOCO2-222ENST00000514006 TKFCQ3LXA3 575 aa7.02□□□□□ -1.29
CALCOCO2-222ENST00000514006 PHAXQ9H814 394 aaKnown RBP7.02□□□□□ -1.29
CALCOCO2-222ENST00000514006 MBIPQ9NS73 344 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms