RNA–Protein interactions for RNA: ENST00000513720.5

AFP-205, Transcript of alpha fetoprotein, humanhuman

TSL 1 (best)

Gene AFP, Length 197 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-205ENST00000513720 PGBD4Q96DM1 585 aa4.52□□□□□ -1.69
AFP-205ENST00000513720 CFAP36Q96G28 342 aa4.52□□□□□ -1.69
AFP-205ENST00000513720 FRMD6Q96NE9 622 aa4.52□□□□□ -1.69
AFP-205ENST00000513720 HAUS7Q99871 368 aa4.52□□□□□ -1.69
AFP-205ENST00000513720 PANK2Q9BZ23 570 aa4.52□□□□□ -1.69
AFP-205ENST00000513720 TRIM8Q9BZR9 551 aa4.52□□□□□ -1.69
AFP-205ENST00000513720 PHACTR1Q9C0D0 580 aa4.52□□□□□ -1.69
AFP-205ENST00000513720 OSBPL2Q9H1P3 480 aa4.52□□□□□ -1.69
AFP-205ENST00000513720 SLKQ9H2G2 1235 aaPredicted RBP4.52□□□□□ -1.69
AFP-205ENST00000513720 TCP11L1Q9NUJ3 509 aa4.52□□□□□ -1.69
AFP-205ENST00000513720 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.52□□□□□ -1.69
AFP-205ENST00000513720 RGL1Q9NZL6 768 aa4.52□□□□□ -1.69
AFP-205ENST00000513720 POLKQ9UBT6 870 aa4.52□□□□□ -1.69
AFP-205ENST00000513720 GTF2A1LQ9UNN4 478 aa4.52□□□□□ -1.69
AFP-205ENST00000513720 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.52□□□□□ -1.69
AFP-205ENST00000513720 SLC30A1Q9Y6M5 507 aa4.52□□□□□ -1.69
AFP-205ENST00000513720 SETD1BQ9UPS6 1966 aaKnown RBP4.52□□□□□ -1.69
AFP-205ENST00000513720 ROCK1Q13464 1354 aa4.52□□□□□ -1.69
AFP-205ENST00000513720 RASA4BC9J798 803 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 M0QX08 132 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 FYB1O15117 783 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 POLR3GO15318 223 aaPredicted RBP4.51□□□□□ -1.69
AFP-205ENST00000513720 PER1O15534 1290 aaPredicted RBP4.51□□□□□ -1.69
AFP-205ENST00000513720 SNX2O60749 519 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 RTN3O95197 1032 aaPredicted RBP4.51□□□□□ -1.69
AFP-205ENST00000513720 SKIP12755 728 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 NCAM1P13591 858 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 KCNA6P17658 529 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 DESP17661 470 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 CD9P21926 228 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 ATP5DP30049 168 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 DNAJA1P31689 397 aaKnown RBP4.51□□□□□ -1.69
AFP-205ENST00000513720 NLRP12P59046 1061 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 TPM4P67936 248 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 PLIN5Q00G26 463 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 MOGSQ13724 837 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 KIF22Q14807 665 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 TNIP1Q15025 636 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 ANKRD1Q15327 319 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 TNNI3KQ59H18 835 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 RILPL1Q5EBL4 403 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 METTL24Q5JXM2 366 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 ARMC4Q5T2S8 1044 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 TMCO3Q6UWJ1 677 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 SYT10Q6XYQ8 523 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 TTC39CQ8N584 583 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 PDCD7Q8N8D1 485 aaKnown RBP4.51□□□□□ -1.69
AFP-205ENST00000513720 ANKK1Q8NFD2 765 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 B4GALNT2Q8NHY0 566 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 CCDC110Q8TBZ0 833 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 NUP133Q8WUM0 1156 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 IPCEF1Q8WWN9 437 aaPredicted RBP4.51□□□□□ -1.69
AFP-205ENST00000513720 TBC1D5Q92609 795 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 RELTQ969Z4 430 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 E2F7Q96AV8 911 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 SKA1Q96BD8 255 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 SAAL1Q96ER3 474 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 MOGAT1Q96PD6 335 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 FAM167BQ9BTA0 163 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 THUMPD2Q9BTF0 503 aaKnown RBP4.51□□□□□ -1.69
AFP-205ENST00000513720 CCSER2Q9H7U1 834 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 DBNDD1Q9H9R9 158 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 LGR6Q9HBX8 967 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 HDAC6Q9UBN7 1215 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 DNAJC5BQ9UF47 199 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 CROTQ9UKG9 612 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 CEP131Q9UPN4 1083 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 SATB2Q9UPW6 733 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 CNPY2Q9Y2B0 182 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 NOSIPQ9Y314 301 aaKnown RBP4.51□□□□□ -1.69
AFP-205ENST00000513720 MRPL11Q9Y3B7 192 aaKnown RBP4.51□□□□□ -1.69
AFP-205ENST00000513720 C2CD2Q9Y426 696 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 MAGED1Q9Y5V3 778 aaPredicted RBP4.51□□□□□ -1.69
AFP-205ENST00000513720 KDRP35968 1356 aa4.51□□□□□ -1.69
AFP-205ENST00000513720 A6NJY4 79 aa4.5□□□□□ -1.69
AFP-205ENST00000513720 TSPY2A6NKD2 308 aa4.5□□□□□ -1.69
AFP-205ENST00000513720 PRRT4C9JH25 899 aa4.5□□□□□ -1.69
AFP-205ENST00000513720 AKR1B15C9JRZ8 316 aaPredicted RBP4.5□□□□□ -1.69
AFP-205ENST00000513720 PDLIM1O00151 329 aa4.5□□□□□ -1.69
AFP-205ENST00000513720 CASQ2O14958 399 aaPredicted RBP4.5□□□□□ -1.69
AFP-205ENST00000513720 TTI1O43156 1089 aa4.5□□□□□ -1.69
AFP-205ENST00000513720 SART1O43290 800 aaKnown RBP4.5□□□□□ -1.69
AFP-205ENST00000513720 RASA4O43374 803 aa4.5□□□□□ -1.69
AFP-205ENST00000513720 MGEA5O60502 916 aa4.5□□□□□ -1.69
AFP-205ENST00000513720 KPNA6O60684 536 aa4.5□□□□□ -1.69
AFP-205ENST00000513720 RGS20O76081 388 aa4.5□□□□□ -1.69
AFP-205ENST00000513720 SLC4A2P04920 1241 aa4.5□□□□□ -1.69
AFP-205ENST00000513720 PYGLP06737 847 aa4.5□□□□□ -1.69
AFP-205ENST00000513720 TSPY3P0CV98 308 aa4.5□□□□□ -1.69
AFP-205ENST00000513720 TSPY8P0CW00 308 aa4.5□□□□□ -1.69
AFP-205ENST00000513720 TROVE2P10155 538 aaKnown RBP eCLIP4.5□□□□□ -1.69
AFP-205ENST00000513720 ATF3P18847 181 aa4.5□□□□□ -1.69
AFP-205ENST00000513720 MCM3P25205 808 aa4.5□□□□□ -1.69
AFP-205ENST00000513720 CTHP32929 405 aa4.5□□□□□ -1.69
AFP-205ENST00000513720 CENPAP49450 140 aa4.5□□□□□ -1.69
AFP-205ENST00000513720 RAB27AP51159 221 aa4.5□□□□□ -1.69
AFP-205ENST00000513720 CLCN2P51788 898 aa4.5□□□□□ -1.69
AFP-205ENST00000513720 BPIFB3P59826 476 aa4.5□□□□□ -1.69
AFP-205ENST00000513720 TSPY1Q01534 308 aa4.5□□□□□ -1.69
AFP-205ENST00000513720 FAPQ12884 760 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms