RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 SPDYE5A6NIY4 337 aa14.8□□□□□ -0.04
CDK7-208ENST00000512687 WDHD1O75717 1129 aaPredicted RBP14.8□□□□□ -0.04
CDK7-208ENST00000512687 ALDH1A1P00352 501 aa14.8□□□□□ -0.04
CDK7-208ENST00000512687 SLURP2P0DP57 97 aa14.8□□□□□ -0.04
CDK7-208ENST00000512687 RGS3P49796 1198 aa14.8□□□□□ -0.04
CDK7-208ENST00000512687 RHBDL3P58872 404 aa14.8□□□□□ -0.04
CDK7-208ENST00000512687 DCAF15Q66K64 600 aa14.8□□□□□ -0.04
CDK7-208ENST00000512687 SPTY2D1Q68D10 685 aaPredicted RBP14.8□□□□□ -0.04
CDK7-208ENST00000512687 NSUN4Q96CB9 384 aaKnown RBP14.8□□□□□ -0.04
CDK7-208ENST00000512687 IDI2Q9BXS1 227 aa14.8□□□□□ -0.04
CDK7-208ENST00000512687 ZNF341Q9BYN7 854 aa14.8□□□□□ -0.04
CDK7-208ENST00000512687 SNRKQ9NRH2 765 aa14.8□□□□□ -0.04
CDK7-208ENST00000512687 HTTP42858 3142 aa14.8□□□□□ -0.04
CDK7-208ENST00000512687 FKTNO75072 461 aa14.79□□□□□ -0.04
CDK7-208ENST00000512687 UQCRFS1P1P0C7P4 283 aa14.79□□□□□ -0.04
CDK7-208ENST00000512687 CRHR2Q13324 411 aa14.79□□□□□ -0.04
CDK7-208ENST00000512687 RBBP6Q7Z6E9 1792 aaKnown RBP14.79□□□□□ -0.04
CDK7-208ENST00000512687 HOOK2Q96ED9 719 aa14.79□□□□□ -0.04
CDK7-208ENST00000512687 ZNF112Q9UJU3 913 aa14.79□□□□□ -0.04
CDK7-208ENST00000512687 DBNLQ9UJU6 430 aaKnown RBP14.79□□□□□ -0.04
CDK7-208ENST00000512687 COG6Q9Y2V7 657 aa14.79□□□□□ -0.04
CDK7-208ENST00000512687 NAV1Q8NEY1 1877 aa14.78□□□□□ -0.04
CDK7-208ENST00000512687 LOC285556D6RIA3 1793 aa14.78□□□□□ -0.04
CDK7-208ENST00000512687 DDX60LQ5H9U9 1706 aaKnown RBP14.78□□□□□ -0.04
CDK7-208ENST00000512687 GPR75-ASB3A0A0A6YYF3 556 aa14.78□□□□□ -0.04
CDK7-208ENST00000512687 CCL15-CCL14A0A0B4J2E2 113 aa14.78□□□□□ -0.04
CDK7-208ENST00000512687 DDTLA6NHG4 134 aaPredicted RBP14.78□□□□□ -0.04
CDK7-208ENST00000512687 CAP1Q01518 475 aa14.78□□□□□ -0.04
CDK7-208ENST00000512687 PICALMQ13492 652 aa14.78□□□□□ -0.04
CDK7-208ENST00000512687 CCL15Q16663 113 aa14.78□□□□□ -0.04
CDK7-208ENST00000512687 TTC39AQ5SRH9 613 aa14.78□□□□□ -0.04
CDK7-208ENST00000512687 ERO1BQ86YB8 467 aa14.78□□□□□ -0.04
CDK7-208ENST00000512687 EAF2Q96CJ1 260 aaPredicted RBP14.78□□□□□ -0.04
CDK7-208ENST00000512687 CCDC8Q9H0W5 538 aaPredicted RBP14.78□□□□□ -0.04
CDK7-208ENST00000512687 RCAN3Q9UKA8 241 aa14.78□□□□□ -0.04
CDK7-208ENST00000512687 EXOC6BQ9Y2D4 811 aa14.78□□□□□ -0.04
CDK7-208ENST00000512687 IRF6O14896 467 aa14.77□□□□□ -0.05
CDK7-208ENST00000512687 ENTPD3O75355 529 aa14.77□□□□□ -0.05
CDK7-208ENST00000512687 CYP2E1P05181 493 aaPredicted RBP14.77□□□□□ -0.05
CDK7-208ENST00000512687 GTF2A2P52657 109 aa14.77□□□□□ -0.05
CDK7-208ENST00000512687 PPIL2Q13356 520 aa14.77□□□□□ -0.05
CDK7-208ENST00000512687 SLF2Q8IX21 1173 aa14.77□□□□□ -0.05
CDK7-208ENST00000512687 FAM43AQ8N2R8 423 aa14.77□□□□□ -0.05
CDK7-208ENST00000512687 RAI14Q9P0K7 980 aa14.77□□□□□ -0.05
CDK7-208ENST00000512687 COL2A1P02458 1487 aaPredicted RBP14.76□□□□□ -0.05
CDK7-208ENST00000512687 PHF20L1A8MW92 1017 aa14.76□□□□□ -0.05
CDK7-208ENST00000512687 ZAP70P43403 619 aa14.76□□□□□ -0.05
CDK7-208ENST00000512687 NOL9Q5SY16 702 aaKnown RBP14.76□□□□□ -0.05
CDK7-208ENST00000512687 C20orf194Q5TEA3 1177 aa14.76□□□□□ -0.05
CDK7-208ENST00000512687 SIRT2Q8IXJ6 389 aa14.76□□□□□ -0.05
CDK7-208ENST00000512687 PIH1D3Q9NQM4 214 aaKnown RBP14.76□□□□□ -0.05
CDK7-208ENST00000512687 HPS5Q9UPZ3 1129 aa14.76□□□□□ -0.05
CDK7-208ENST00000512687 TNRC18O15417 2968 aaPredicted RBP14.76□□□□□ -0.05
CDK7-208ENST00000512687 CENPFP49454 3210 aa14.75□□□□□ -0.05
CDK7-208ENST00000512687 MYH8P13535 1937 aa14.75□□□□□ -0.05
CDK7-208ENST00000512687 GSTO1P78417 241 aa14.75□□□□□ -0.05
CDK7-208ENST00000512687 CCDC158Q5M9N0 1113 aa14.75□□□□□ -0.05
CDK7-208ENST00000512687 OTUD7BQ6GQQ9 843 aa14.75□□□□□ -0.05
CDK7-208ENST00000512687 ADGRA1Q86SQ6 560 aa14.75□□□□□ -0.05
CDK7-208ENST00000512687 CD99L2Q8TCZ2 262 aa14.75□□□□□ -0.05
CDK7-208ENST00000512687 ZNF512BQ96KM6 892 aaPredicted RBP14.75□□□□□ -0.05
CDK7-208ENST00000512687 ZBTB40Q9NUA8 1239 aa14.75□□□□□ -0.05
CDK7-208ENST00000512687 LRP2BPQ9P2M1 347 aa14.75□□□□□ -0.05
CDK7-208ENST00000512687 DDX19BQ9UMR2 479 aa14.75□□□□□ -0.05
CDK7-208ENST00000512687 NDUFB9Q9Y6M9 179 aa14.75□□□□□ -0.05
CDK7-208ENST00000512687 BTBD19C9JJ37 291 aa14.74□□□□□ -0.05
CDK7-208ENST00000512687 MS4A1P11836 297 aa14.74□□□□□ -0.05
CDK7-208ENST00000512687 MAP3K10Q02779 954 aa14.74□□□□□ -0.05
CDK7-208ENST00000512687 PPATQ06203 517 aa14.74□□□□□ -0.05
CDK7-208ENST00000512687 TAF1CQ15572 869 aaPredicted RBP14.74□□□□□ -0.05
CDK7-208ENST00000512687 ZSCAN29Q8IWY8 852 aaPredicted RBP14.74□□□□□ -0.05
CDK7-208ENST00000512687 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.74□□□□□ -0.05
CDK7-208ENST00000512687 SH3RF3Q8TEJ3 882 aaPredicted RBP14.74□□□□□ -0.05
CDK7-208ENST00000512687 IL1RAPL2Q9NP60 686 aa14.74□□□□□ -0.05
CDK7-208ENST00000512687 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.74□□□□□ -0.05
CDK7-208ENST00000512687 BAZ2AQ9UIF9 1905 aaKnown RBP14.73□□□□□ -0.05
CDK7-208ENST00000512687 FAM196BA6NMK8 535 aa14.73□□□□□ -0.05
CDK7-208ENST00000512687 LDHCP07864 332 aa14.73□□□□□ -0.05
CDK7-208ENST00000512687 CETPP11597 493 aa14.73□□□□□ -0.05
CDK7-208ENST00000512687 RGS19P49795 217 aa14.73□□□□□ -0.05
CDK7-208ENST00000512687 SOX10P56693 466 aa14.73□□□□□ -0.05
CDK7-208ENST00000512687 SNAPC2Q13487 334 aa14.73□□□□□ -0.05
CDK7-208ENST00000512687 MOGSQ13724 837 aa14.73□□□□□ -0.05
CDK7-208ENST00000512687 PKN2Q16513 984 aaKnown RBP14.73□□□□□ -0.05
CDK7-208ENST00000512687 OTOP1Q7RTM1 612 aa14.73□□□□□ -0.05
CDK7-208ENST00000512687 IFNLR1Q8IU57 520 aaPredicted RBP14.73□□□□□ -0.05
CDK7-208ENST00000512687 RHPN1Q8TCX5 695 aa14.73□□□□□ -0.05
CDK7-208ENST00000512687 KCNH4Q9UQ05 1017 aa14.73□□□□□ -0.05
CDK7-208ENST00000512687 DOCK3Q8IZD9 2030 aa14.72□□□□□ -0.05
CDK7-208ENST00000512687 NAA16Q6N069 864 aaPredicted RBP14.72□□□□□ -0.05
CDK7-208ENST00000512687 FBXO46Q6PJ61 603 aaPredicted RBP14.72□□□□□ -0.05
CDK7-208ENST00000512687 AACSQ86V21 672 aa14.72□□□□□ -0.05
CDK7-208ENST00000512687 ERC1Q8IUD2 1116 aa14.72□□□□□ -0.05
CDK7-208ENST00000512687 TEX11Q8IYF3 940 aa14.72□□□□□ -0.05
CDK7-208ENST00000512687 SCYL3Q8IZE3 742 aa14.72□□□□□ -0.05
CDK7-208ENST00000512687 SPDYE1Q8NFV5 336 aaPredicted RBP14.72□□□□□ -0.05
CDK7-208ENST00000512687 OSBPL5Q9H0X9 879 aaPredicted RBP14.72□□□□□ -0.05
CDK7-208ENST00000512687 ANTXR1Q9H6X2 564 aa14.72□□□□□ -0.05
CDK7-208ENST00000512687 AATFQ9NY61 560 aaKnown RBP eCLIP14.72□□□□□ -0.05
CDK7-208ENST00000512687 TRIM17Q9Y577 477 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms