RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 HDLBPQ00341 1268 aaKnown RBP11.67□□□□□ -0.54
NUP54-211ENST00000512151 MAP3K12Q12852 859 aa11.67□□□□□ -0.54
NUP54-211ENST00000512151 POLA2Q14181 598 aa11.67□□□□□ -0.54
NUP54-211ENST00000512151 GADL1Q6ZQY3 521 aa11.67□□□□□ -0.54
NUP54-211ENST00000512151 G2E3Q7L622 706 aa11.67□□□□□ -0.54
NUP54-211ENST00000512151 HOOK2Q96ED9 719 aa11.67□□□□□ -0.54
NUP54-211ENST00000512151 HIBADHP31937 336 aaKnown RBP11.67□□□□□ -0.54
NUP54-211ENST00000512151 NEXNQ0ZGT2 675 aa11.67□□□□□ -0.54
NUP54-211ENST00000512151 CHAF1AQ13111 956 aaPredicted RBP11.67□□□□□ -0.54
NUP54-211ENST00000512151 SHHQ15465 462 aa11.67□□□□□ -0.54
NUP54-211ENST00000512151 C9orf50Q5SZB4 431 aa11.67□□□□□ -0.54
NUP54-211ENST00000512151 MAP3K21Q5TCX8 1036 aa11.67□□□□□ -0.54
NUP54-211ENST00000512151 TSPYL6Q8N831 410 aa11.67□□□□□ -0.54
NUP54-211ENST00000512151 TRIB2Q92519 343 aa11.67□□□□□ -0.54
NUP54-211ENST00000512151 TEKT1Q969V4 418 aa11.67□□□□□ -0.54
NUP54-211ENST00000512151 TMOD2Q9NZR1 351 aa11.67□□□□□ -0.54
NUP54-211ENST00000512151 IFIT5Q13325 482 aaKnown RBP11.66□□□□□ -0.54
NUP54-211ENST00000512151 FASTKD5Q7L8L6 764 aaKnown RBP11.66□□□□□ -0.54
NUP54-211ENST00000512151 SMCR8Q8TEV9 937 aaPredicted RBP11.66□□□□□ -0.54
NUP54-211ENST00000512151 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.66□□□□□ -0.54
NUP54-211ENST00000512151 SLC45A1Q9Y2W3 748 aa11.66□□□□□ -0.54
NUP54-211ENST00000512151 AFG3L2Q9Y4W6 797 aa11.66□□□□□ -0.54
NUP54-211ENST00000512151 ZHX2Q9Y6X8 837 aa11.66□□□□□ -0.54
NUP54-211ENST00000512151 CDH23Q9H251 3354 aa11.65□□□□□ -0.54
NUP54-211ENST00000512151 LTBP2Q14767 1821 aa11.65□□□□□ -0.54
NUP54-211ENST00000512151 AK9Q5TCS8 1911 aa11.65□□□□□ -0.54
NUP54-211ENST00000512151 MAST2Q6P0Q8 1798 aa11.65□□□□□ -0.54
NUP54-211ENST00000512151 PHIPQ8WWQ0 1821 aa11.65□□□□□ -0.54
NUP54-211ENST00000512151 PHF20L1A8MW92 1017 aa11.65□□□□□ -0.55
NUP54-211ENST00000512151 SLURP2P0DP57 97 aa11.65□□□□□ -0.55
NUP54-211ENST00000512151 PTPRAP18433 802 aa11.65□□□□□ -0.55
NUP54-211ENST00000512151 TCP10Q12799 353 aa11.65□□□□□ -0.55
NUP54-211ENST00000512151 NFIAQ12857 509 aa11.65□□□□□ -0.55
NUP54-211ENST00000512151 EPHA10Q5JZY3 1008 aa11.65□□□□□ -0.55
NUP54-211ENST00000512151 TREML2Q5T2D2 321 aa11.65□□□□□ -0.55
NUP54-211ENST00000512151 CCDC30Q5VVM6 783 aa11.65□□□□□ -0.55
NUP54-211ENST00000512151 CCDC84Q86UT8 332 aaPredicted RBP11.65□□□□□ -0.55
NUP54-211ENST00000512151 ZFPM1Q8IX07 1006 aa11.65□□□□□ -0.55
NUP54-211ENST00000512151 FAM151AQ8WW52 585 aa11.65□□□□□ -0.55
NUP54-211ENST00000512151 ATRNL1Q5VV63 1379 aa11.64□□□□□ -0.55
NUP54-211ENST00000512151 ZNF316A6NFI3 1004 aaPredicted RBP11.64□□□□□ -0.55
NUP54-211ENST00000512151 PRKAR2AP13861 404 aaKnown RBP11.64□□□□□ -0.55
NUP54-211ENST00000512151 UBE4AQ14139 1066 aa11.64□□□□□ -0.55
NUP54-211ENST00000512151 FAM110CQ1W6H9 321 aa11.64□□□□□ -0.55
NUP54-211ENST00000512151 FBXO33Q7Z6M2 555 aa11.64□□□□□ -0.55
NUP54-211ENST00000512151 LBHD1Q9BQE6 289 aaPredicted RBP11.64□□□□□ -0.55
NUP54-211ENST00000512151 MRIQ9BWK5 157 aa11.64□□□□□ -0.55
NUP54-211ENST00000512151 CHMP3Q9Y3E7 222 aa11.64□□□□□ -0.55
NUP54-211ENST00000512151 SLC4A2P04920 1241 aa11.63□□□□□ -0.55
NUP54-211ENST00000512151 CCND3P30281 292 aaPredicted RBP11.63□□□□□ -0.55
NUP54-211ENST00000512151 LDHAL6AQ6ZMR3 332 aa11.63□□□□□ -0.55
NUP54-211ENST00000512151 SCYL3Q8IZE3 742 aa11.63□□□□□ -0.55
NUP54-211ENST00000512151 RUNDC1Q96C34 613 aa11.63□□□□□ -0.55
NUP54-211ENST00000512151 PUS3Q9BZE2 481 aaKnown RBP11.63□□□□□ -0.55
NUP54-211ENST00000512151 FAM198AQ9UFP1 575 aa11.63□□□□□ -0.55
NUP54-211ENST00000512151 BDP1A6H8Y1 2624 aa11.62□□□□□ -0.55
NUP54-211ENST00000512151 PEX10O60683 326 aa11.62□□□□□ -0.55
NUP54-211ENST00000512151 CYP2B6P20813 491 aa11.62□□□□□ -0.55
NUP54-211ENST00000512151 SMAD3P84022 425 aaKnown RBP11.62□□□□□ -0.55
NUP54-211ENST00000512151 CDC42EP5Q6NZY7 148 aa11.62□□□□□ -0.55
NUP54-211ENST00000512151 SAMD1Q6SPF0 538 aaPredicted RBP11.62□□□□□ -0.55
NUP54-211ENST00000512151 LMBR1LQ6UX01 489 aa11.62□□□□□ -0.55
NUP54-211ENST00000512151 CNNM1Q9NRU3 951 aa11.62□□□□□ -0.55
NUP54-211ENST00000512151 IFT57Q9NWB7 429 aa11.62□□□□□ -0.55
NUP54-211ENST00000512151 AGTPBP1Q9UPW5 1226 aa11.62□□□□□ -0.55
NUP54-211ENST00000512151 TRIM75PA6NK02 468 aa11.61□□□□□ -0.55
NUP54-211ENST00000512151 CACNB2Q08289 660 aaPredicted RBP11.61□□□□□ -0.55
NUP54-211ENST00000512151 GRIN2CQ14957 1233 aa11.61□□□□□ -0.55
NUP54-211ENST00000512151 HHIPL2Q6UWX4 724 aa11.61□□□□□ -0.55
NUP54-211ENST00000512151 TBC1D22AQ8WUA7 517 aa11.61□□□□□ -0.55
NUP54-211ENST00000512151 DAGLAQ9Y4D2 1042 aa11.61□□□□□ -0.55
NUP54-211ENST00000512151 SYNGAP1Q96PV0 1343 aa11.61□□□□□ -0.55
NUP54-211ENST00000512151 PIEZO1Q92508 2521 aa11.6□□□□□ -0.55
NUP54-211ENST00000512151 FRMPD3Q5JV73 1810 aa11.6□□□□□ -0.55
NUP54-211ENST00000512151 ATN1P54259 1190 aaPredicted RBP11.6□□□□□ -0.55
NUP54-211ENST00000512151 CCL14Q16627 93 aa11.6□□□□□ -0.55
NUP54-211ENST00000512151 SH3BP5LQ7L8J4 393 aa11.6□□□□□ -0.55
NUP54-211ENST00000512151 ADAMTS19Q8TE59 1207 aa11.6□□□□□ -0.55
NUP54-211ENST00000512151 SENP6Q9GZR1 1112 aaPredicted RBP11.6□□□□□ -0.55
NUP54-211ENST00000512151 PICK1Q9NRD5 415 aa11.6□□□□□ -0.55
NUP54-211ENST00000512151 RTP1P59025 263 aa11.59□□□□□ -0.55
NUP54-211ENST00000512151 GNAI1P63096 354 aa11.59□□□□□ -0.55
NUP54-211ENST00000512151 DIXDC1Q155Q3 683 aa11.59□□□□□ -0.55
NUP54-211ENST00000512151 LINS1Q8NG48 757 aa11.59□□□□□ -0.55
NUP54-211ENST00000512151 MYH16Q9H6N6 1097 aa11.59□□□□□ -0.55
NUP54-211ENST00000512151 DOCK1Q14185 1865 aa11.59□□□□□ -0.55
NUP54-211ENST00000512151 DOCK2Q92608 1830 aa11.58□□□□□ -0.56
NUP54-211ENST00000512151 TAF7LQ5H9L4 462 aa11.58□□□□□ -0.56
NUP54-211ENST00000512151 DNAAF4Q8WXU2 420 aa11.58□□□□□ -0.56
NUP54-211ENST00000512151 BADQ92934 168 aa11.58□□□□□ -0.56
NUP54-211ENST00000512151 ASB2Q96Q27 587 aa11.58□□□□□ -0.56
NUP54-211ENST00000512151 LOC285556D6RIA3 1793 aa11.58□□□□□ -0.56
NUP54-211ENST00000512151 POTEMA6NI47 508 aa11.57□□□□□ -0.56
NUP54-211ENST00000512151 FRAT2O75474 233 aaPredicted RBP11.57□□□□□ -0.56
NUP54-211ENST00000512151 GCLCP48506 637 aaPredicted RBP11.57□□□□□ -0.56
NUP54-211ENST00000512151 MAP3K10Q02779 954 aa11.57□□□□□ -0.56
NUP54-211ENST00000512151 CCDC57Q2TAC2 916 aa11.57□□□□□ -0.56
NUP54-211ENST00000512151 VPS37DQ86XT2 251 aa11.57□□□□□ -0.56
NUP54-211ENST00000512151 USP6NLQ92738 828 aa11.57□□□□□ -0.56
NUP54-211ENST00000512151 NECAB3Q96P71 396 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms