RNA–Protein interactions for RNA: ENST00000512147.5

CLDND1-225, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-225ENST00000512147 A0A0G2JMZ2 1700 aa8.35□□□□□ -1.07
CLDND1-225ENST00000512147 PPATQ06203 517 aa8.35□□□□□ -1.07
CLDND1-225ENST00000512147 DMWDQ09019 674 aa8.35□□□□□ -1.07
CLDND1-225ENST00000512147 TNFAIP1Q13829 316 aa8.35□□□□□ -1.07
CLDND1-225ENST00000512147 CNGB1Q14028 1251 aaPredicted RBP8.35□□□□□ -1.07
CLDND1-225ENST00000512147 CC2D1BQ5T0F9 858 aaKnown RBP8.35□□□□□ -1.07
CLDND1-225ENST00000512147 PPP2R2DQ66LE6 453 aa8.35□□□□□ -1.07
CLDND1-225ENST00000512147 FBXL6Q8N531 539 aa8.35□□□□□ -1.07
CLDND1-225ENST00000512147 TRIB2Q92519 343 aa8.35□□□□□ -1.07
CLDND1-225ENST00000512147 CELF1Q92879 486 aaKnown RBP8.35□□□□□ -1.07
CLDND1-225ENST00000512147 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.35□□□□□ -1.07
CLDND1-225ENST00000512147 SNCAIPQ9Y6H5 919 aa8.35□□□□□ -1.07
CLDND1-225ENST00000512147 EP300Q09472 2414 aaPredicted RBP8.34□□□□□ -1.07
CLDND1-225ENST00000512147 MYBBP1AQ9BQG0 1328 aaKnown RBP8.34□□□□□ -1.07
CLDND1-225ENST00000512147 DNM1LO00429 736 aa8.34□□□□□ -1.07
CLDND1-225ENST00000512147 IL9P15248 144 aa8.34□□□□□ -1.07
CLDND1-225ENST00000512147 LEXMQ3ZCV2 418 aa8.34□□□□□ -1.07
CLDND1-225ENST00000512147 PTCRAQ6ISU1 281 aaPredicted RBP8.34□□□□□ -1.07
CLDND1-225ENST00000512147 SMCR8Q8TEV9 937 aaPredicted RBP8.34□□□□□ -1.07
CLDND1-225ENST00000512147 ZBTB3Q9H5J0 574 aa8.34□□□□□ -1.07
CLDND1-225ENST00000512147 ALG13Q9NP73 1137 aaKnown RBP8.34□□□□□ -1.07
CLDND1-225ENST00000512147 REV3LO60673 3130 aa8.34□□□□□ -1.07
CLDND1-225ENST00000512147 DOCK3Q8IZD9 2030 aa8.34□□□□□ -1.07
CLDND1-225ENST00000512147 NUP98P52948 1817 aa8.33□□□□□ -1.08
CLDND1-225ENST00000512147 CHD9Q3L8U1 2897 aa8.33□□□□□ -1.08
CLDND1-225ENST00000512147 ANKRD36CQ5JPF3 1778 aa8.33□□□□□ -1.08
CLDND1-225ENST00000512147 TMEM221A6NGB7 291 aa8.33□□□□□ -1.08
CLDND1-225ENST00000512147 M0R296 226 aa8.33□□□□□ -1.08
CLDND1-225ENST00000512147 KDM4AO75164 1064 aa8.33□□□□□ -1.08
CLDND1-225ENST00000512147 CACNB2Q08289 660 aaPredicted RBP8.33□□□□□ -1.08
CLDND1-225ENST00000512147 PUS10Q3MIT2 529 aaKnown RBP8.33□□□□□ -1.08
CLDND1-225ENST00000512147 MCTP2Q6DN12 878 aa8.33□□□□□ -1.08
CLDND1-225ENST00000512147 MORC1Q86VD1 984 aa8.33□□□□□ -1.08
CLDND1-225ENST00000512147 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.33□□□□□ -1.08
CLDND1-225ENST00000512147 EDAQ92838 391 aa8.33□□□□□ -1.08
CLDND1-225ENST00000512147 BRWD1Q9NSI6 2320 aa8.33□□□□□ -1.08
CLDND1-225ENST00000512147 DLL3Q9NYJ7 618 aa8.33□□□□□ -1.08
CLDND1-225ENST00000512147 KIF20BQ96Q89 1820 aa8.33□□□□□ -1.08
CLDND1-225ENST00000512147 CEMIPQ8WUJ3 1361 aa8.33□□□□□ -1.08
CLDND1-225ENST00000512147 RPAP1Q9BWH6 1393 aaPredicted RBP8.33□□□□□ -1.08
CLDND1-225ENST00000512147 TECTAO75443 2155 aa8.32□□□□□ -1.08
CLDND1-225ENST00000512147 BTBD11A6QL63 1104 aa8.32□□□□□ -1.08
CLDND1-225ENST00000512147 RFXAPO00287 272 aa8.32□□□□□ -1.08
CLDND1-225ENST00000512147 CLTBP09497 229 aa8.32□□□□□ -1.08
CLDND1-225ENST00000512147 CCND3P30281 292 aaPredicted RBP8.32□□□□□ -1.08
CLDND1-225ENST00000512147 RPS8P62241 208 aaKnown RBP8.32□□□□□ -1.08
CLDND1-225ENST00000512147 RASIP1Q5U651 963 aa8.32□□□□□ -1.08
CLDND1-225ENST00000512147 GIGYF2Q6Y7W6 1299 aaKnown RBP8.32□□□□□ -1.08
CLDND1-225ENST00000512147 TRIM67Q6ZTA4 783 aa8.32□□□□□ -1.08
CLDND1-225ENST00000512147 TRMT44Q8IYL2 757 aaKnown RBP8.32□□□□□ -1.08
CLDND1-225ENST00000512147 WRNIP1Q96S55 665 aa8.32□□□□□ -1.08
CLDND1-225ENST00000512147 BSDC1Q9NW68 430 aaPredicted RBP8.32□□□□□ -1.08
CLDND1-225ENST00000512147 GJD2Q9UKL4 321 aa8.32□□□□□ -1.08
CLDND1-225ENST00000512147 YBX2Q9Y2T7 364 aaKnown RBP8.32□□□□□ -1.08
CLDND1-225ENST00000512147 CEP250Q9BV73 2442 aa8.31□□□□□ -1.08
CLDND1-225ENST00000512147 GRXCR2A6NFK2 248 aa8.31□□□□□ -1.08
CLDND1-225ENST00000512147 KIAA0355O15063 1070 aa8.31□□□□□ -1.08
CLDND1-225ENST00000512147 KCNQ3O43525 872 aa8.31□□□□□ -1.08
CLDND1-225ENST00000512147 SLC5A1P13866 664 aa8.31□□□□□ -1.08
CLDND1-225ENST00000512147 CYP2B6P20813 491 aa8.31□□□□□ -1.08
CLDND1-225ENST00000512147 AVPR2P30518 371 aa8.31□□□□□ -1.08
CLDND1-225ENST00000512147 NUBP1P53384 320 aa8.31□□□□□ -1.08
CLDND1-225ENST00000512147 TLE2Q04725 743 aa8.31□□□□□ -1.08
CLDND1-225ENST00000512147 SNX17Q15036 470 aa8.31□□□□□ -1.08
CLDND1-225ENST00000512147 HERC4Q5GLZ8 1057 aaPredicted RBP8.31□□□□□ -1.08
CLDND1-225ENST00000512147 DIEXFQ68CQ4 756 aaKnown RBP8.31□□□□□ -1.08
CLDND1-225ENST00000512147 KRT40Q6A162 431 aa8.31□□□□□ -1.08
CLDND1-225ENST00000512147 TTLL5Q6EMB2 1281 aa8.31□□□□□ -1.08
CLDND1-225ENST00000512147 KIAA2013Q8IYS2 634 aa8.31□□□□□ -1.08
CLDND1-225ENST00000512147 ANKRD13CQ8N6S4 541 aa8.31□□□□□ -1.08
CLDND1-225ENST00000512147 UBE2ZQ9H832 354 aaPredicted RBP8.31□□□□□ -1.08
CLDND1-225ENST00000512147 PRKRIP1Q9H875 184 aaPredicted RBP8.31□□□□□ -1.08
CLDND1-225ENST00000512147 ZNF536O15090 1300 aa8.3□□□□□ -1.08
CLDND1-225ENST00000512147 SPDYE2BA6NHP3 402 aa8.3□□□□□ -1.08
CLDND1-225ENST00000512147 MSCO60682 206 aa8.3□□□□□ -1.08
CLDND1-225ENST00000512147 SPDYE6P0CI01 402 aa8.3□□□□□ -1.08
CLDND1-225ENST00000512147 ZKSCAN1P17029 563 aaPredicted RBP8.3□□□□□ -1.08
CLDND1-225ENST00000512147 KCNA5P22460 613 aa8.3□□□□□ -1.08
CLDND1-225ENST00000512147 COL9A3Q14050 684 aaPredicted RBP8.3□□□□□ -1.08
CLDND1-225ENST00000512147 RALBP1Q15311 655 aa8.3□□□□□ -1.08
CLDND1-225ENST00000512147 MTHFSDQ2M296 383 aaKnown RBP8.3□□□□□ -1.08
CLDND1-225ENST00000512147 TMEM240Q5SV17 173 aa8.3□□□□□ -1.08
CLDND1-225ENST00000512147 C1orf53Q5VUE5 145 aa8.3□□□□□ -1.08
CLDND1-225ENST00000512147 KIAA0319Q5VV43 1072 aa8.3□□□□□ -1.08
CLDND1-225ENST00000512147 GPAT2Q6NUI2 795 aa8.3□□□□□ -1.08
CLDND1-225ENST00000512147 TTLL7Q6ZT98 887 aa8.3□□□□□ -1.08
CLDND1-225ENST00000512147 FRMD5Q7Z6J6 570 aa8.3□□□□□ -1.08
CLDND1-225ENST00000512147 ARRDC4Q8NCT1 418 aa8.3□□□□□ -1.08
CLDND1-225ENST00000512147 LPAR1Q92633 364 aa8.3□□□□□ -1.08
CLDND1-225ENST00000512147 PRMT6Q96LA8 375 aaPredicted RBP8.3□□□□□ -1.08
CLDND1-225ENST00000512147 MTIF3Q9H2K0 278 aaKnown RBP8.3□□□□□ -1.08
CLDND1-225ENST00000512147 PRKAG3Q9UGI9 489 aa8.3□□□□□ -1.08
CLDND1-225ENST00000512147 MUTYHQ9UIF7 546 aa8.3□□□□□ -1.08
CLDND1-225ENST00000512147 FAM50BQ9Y247 325 aa8.3□□□□□ -1.08
CLDND1-225ENST00000512147 DNAH12Q6ZR08 3092 aa8.3□□□□□ -1.08
CLDND1-225ENST00000512147 SH3TC1Q8TE82 1336 aa8.29□□□□□ -1.08
CLDND1-225ENST00000512147 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.29□□□□□ -1.08
CLDND1-225ENST00000512147 KBTBD13C9JR72 458 aa8.29□□□□□ -1.08
CLDND1-225ENST00000512147 XRCC5P13010 732 aaKnown RBP8.29□□□□□ -1.08
CLDND1-225ENST00000512147 PPP2R1AP30153 589 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms