RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 MON2Q7Z3U7 1717 aa11.23□□□□□ -0.61
POLR2J3-215ENST00000511313 hCG_1984214I3L0E3 225 aa11.23□□□□□ -0.61
POLR2J3-215ENST00000511313 TULP1O00294 542 aaPredicted RBP11.23□□□□□ -0.61
POLR2J3-215ENST00000511313 PARP1P09874 1014 aaKnown RBP11.23□□□□□ -0.61
POLR2J3-215ENST00000511313 RABEP1Q15276 862 aa11.23□□□□□ -0.61
POLR2J3-215ENST00000511313 GPATCH4Q5T3I0 446 aaKnown RBP11.23□□□□□ -0.61
POLR2J3-215ENST00000511313 C15orf52Q6ZUT6 534 aaKnown RBP11.23□□□□□ -0.61
POLR2J3-215ENST00000511313 TMEM179Q6ZVK1 233 aa11.23□□□□□ -0.61
POLR2J3-215ENST00000511313 ZNF713Q8N859 430 aaPredicted RBP11.23□□□□□ -0.61
POLR2J3-215ENST00000511313 MEIS3Q99687 375 aa11.23□□□□□ -0.61
POLR2J3-215ENST00000511313 JPH2Q9BR39 696 aaPredicted RBP11.23□□□□□ -0.61
POLR2J3-215ENST00000511313 GPSM2P81274 684 aa11.22□□□□□ -0.61
POLR2J3-215ENST00000511313 RAB3GAP1Q15042 981 aa11.22□□□□□ -0.61
POLR2J3-215ENST00000511313 ERO1BQ86YB8 467 aa11.22□□□□□ -0.61
POLR2J3-215ENST00000511313 LBHD1Q9BQE6 289 aaPredicted RBP11.22□□□□□ -0.61
POLR2J3-215ENST00000511313 CXCL11O14625 94 aa11.22□□□□□ -0.61
POLR2J3-215ENST00000511313 CCDC102BQ68D86 513 aa11.22□□□□□ -0.61
POLR2J3-215ENST00000511313 FAM83AQ86UY5 434 aa11.22□□□□□ -0.61
POLR2J3-215ENST00000511313 TMEM87BQ96K49 555 aa11.22□□□□□ -0.61
POLR2J3-215ENST00000511313 TRIM47Q96LD4 638 aa11.22□□□□□ -0.61
POLR2J3-215ENST00000511313 MYOZ2Q9NPC6 264 aa11.22□□□□□ -0.61
POLR2J3-215ENST00000511313 CCDC24Q8N4L8 307 aa11.22□□□□□ -0.61
POLR2J3-215ENST00000511313 SSH3Q8TE77 659 aa11.22□□□□□ -0.61
POLR2J3-215ENST00000511313 DESP17661 470 aa11.21□□□□□ -0.61
POLR2J3-215ENST00000511313 HLFQ16534 295 aa11.21□□□□□ -0.61
POLR2J3-215ENST00000511313 PPP2R3CQ969Q6 453 aa11.21□□□□□ -0.61
POLR2J3-215ENST00000511313 SPDYE4A6NLX3 237 aa11.21□□□□□ -0.61
POLR2J3-215ENST00000511313 SEZ6LQ9BYH1 1024 aa11.21□□□□□ -0.61
POLR2J3-215ENST00000511313 SH2B1Q9NRF2 756 aaPredicted RBP11.21□□□□□ -0.61
POLR2J3-215ENST00000511313 MTMR7Q9Y216 660 aa11.21□□□□□ -0.61
POLR2J3-215ENST00000511313 USP17L15C9J2P7 530 aa11.21□□□□□ -0.62
POLR2J3-215ENST00000511313 USP17L13C9JLJ4 530 aa11.21□□□□□ -0.62
POLR2J3-215ENST00000511313 USP17L11C9JVI0 530 aa11.21□□□□□ -0.62
POLR2J3-215ENST00000511313 USP17L18D6R9N7 530 aa11.21□□□□□ -0.62
POLR2J3-215ENST00000511313 USP17L22D6RA61 530 aa11.21□□□□□ -0.62
POLR2J3-215ENST00000511313 USP17L17D6RBQ6 530 aa11.21□□□□□ -0.62
POLR2J3-215ENST00000511313 USP17L19D6RCP7 530 aa11.21□□□□□ -0.62
POLR2J3-215ENST00000511313 USP17L20D6RJB6 530 aa11.21□□□□□ -0.62
POLR2J3-215ENST00000511313 SLC25A27O95847 323 aa11.21□□□□□ -0.62
POLR2J3-215ENST00000511313 KRT18P05783 430 aaKnown RBP11.21□□□□□ -0.62
POLR2J3-215ENST00000511313 USP17L24Q0WX57 530 aa11.21□□□□□ -0.62
POLR2J3-215ENST00000511313 KBTBD3Q8NAB2 608 aa11.21□□□□□ -0.62
POLR2J3-215ENST00000511313 LPAR1Q92633 364 aa11.21□□□□□ -0.62
POLR2J3-215ENST00000511313 CCDC194A0A1B0GVG4 234 aa11.21□□□□□ -0.62
POLR2J3-215ENST00000511313 MYCNP04198 464 aaPredicted RBP11.21□□□□□ -0.62
POLR2J3-215ENST00000511313 TMEM67Q5HYA8 995 aa11.21□□□□□ -0.62
POLR2J3-215ENST00000511313 DCTPP1Q9H773 170 aa11.21□□□□□ -0.62
POLR2J3-215ENST00000511313 SNRKQ9NRH2 765 aa11.21□□□□□ -0.62
POLR2J3-215ENST00000511313 SERPINB13Q9UIV8 391 aa11.21□□□□□ -0.62
POLR2J3-215ENST00000511313 SLC1A4P43007 532 aa11.2□□□□□ -0.62
POLR2J3-215ENST00000511313 IRX6P78412 446 aaPredicted RBP11.2□□□□□ -0.62
POLR2J3-215ENST00000511313 TSPYL2Q9H2G4 693 aaPredicted RBP11.2□□□□□ -0.62
POLR2J3-215ENST00000511313 ICA1Q05084 483 aa11.2□□□□□ -0.62
POLR2J3-215ENST00000511313 TAF5LO75529 589 aa11.2□□□□□ -0.62
POLR2J3-215ENST00000511313 SCARF1Q14162 830 aa11.2□□□□□ -0.62
POLR2J3-215ENST00000511313 TSPYL6Q8N831 410 aa11.2□□□□□ -0.62
POLR2J3-215ENST00000511313 C1orf115Q9H7X2 142 aa11.2□□□□□ -0.62
POLR2J3-215ENST00000511313 IQSEC3Q9UPP2 1182 aaPredicted RBP11.2□□□□□ -0.62
POLR2J3-215ENST00000511313 CEP85Q6P2H3 762 aa11.2□□□□□ -0.62
POLR2J3-215ENST00000511313 KCNV1Q6PIU1 500 aa11.2□□□□□ -0.62
POLR2J3-215ENST00000511313 RETREG2Q8NC44 543 aa11.2□□□□□ -0.62
POLR2J3-215ENST00000511313 GGA3Q9NZ52 723 aa11.2□□□□□ -0.62
POLR2J3-215ENST00000511313 MBD4O95243 580 aa11.19□□□□□ -0.62
POLR2J3-215ENST00000511313 MAP2K2P36507 400 aa11.19□□□□□ -0.62
POLR2J3-215ENST00000511313 SSRP1Q08945 709 aaKnown RBP11.19□□□□□ -0.62
POLR2J3-215ENST00000511313 MTX1Q13505 466 aa11.19□□□□□ -0.62
POLR2J3-215ENST00000511313 USP37Q86T82 979 aa11.19□□□□□ -0.62
POLR2J3-215ENST00000511313 GIMAP8Q8ND71 665 aaPredicted RBP11.19□□□□□ -0.62
POLR2J3-215ENST00000511313 PHLPP2Q6ZVD8 1323 aa11.19□□□□□ -0.62
POLR2J3-215ENST00000511313 RIC1Q4ADV7 1423 aa11.19□□□□□ -0.62
POLR2J3-215ENST00000511313 GNAT1P11488 350 aa11.19□□□□□ -0.62
POLR2J3-215ENST00000511313 RGMBQ6NW40 437 aa11.19□□□□□ -0.62
POLR2J3-215ENST00000511313 SAMD3Q8N6K7 520 aa11.19□□□□□ -0.62
POLR2J3-215ENST00000511313 GOLGA8AA7E2F4 631 aa11.19□□□□□ -0.62
POLR2J3-215ENST00000511313 GOLGA8BA8MQT2 603 aa11.19□□□□□ -0.62
POLR2J3-215ENST00000511313 TNPO2O14787 897 aaKnown RBP11.19□□□□□ -0.62
POLR2J3-215ENST00000511313 MSCO60682 206 aa11.19□□□□□ -0.62
POLR2J3-215ENST00000511313 CTNND1O60716 968 aaKnown RBP11.19□□□□□ -0.62
POLR2J3-215ENST00000511313 NBPF15Q8N660 670 aa11.19□□□□□ -0.62
POLR2J3-215ENST00000511313 ASB14A6NK59 587 aa11.18□□□□□ -0.62
POLR2J3-215ENST00000511313 NBPF26B4DH59 902 aa11.18□□□□□ -0.62
POLR2J3-215ENST00000511313 PATL2C9JE40 543 aaKnown RBP11.18□□□□□ -0.62
POLR2J3-215ENST00000511313 FKTNO75072 461 aa11.18□□□□□ -0.62
POLR2J3-215ENST00000511313 FOSP01100 380 aaPredicted RBP11.18□□□□□ -0.62
POLR2J3-215ENST00000511313 CSF1RP07333 972 aa11.18□□□□□ -0.62
POLR2J3-215ENST00000511313 NBPF10Q6P3W6 841 aaKnown RBP11.18□□□□□ -0.62
POLR2J3-215ENST00000511313 NOP58Q9Y2X3 529 aaKnown RBP11.18□□□□□ -0.62
POLR2J3-215ENST00000511313 TOP1P11387 765 aaKnown RBP11.18□□□□□ -0.62
POLR2J3-215ENST00000511313 PRKG1Q13976 671 aa11.18□□□□□ -0.62
POLR2J3-215ENST00000511313 ZNF512BQ96KM6 892 aaPredicted RBP11.18□□□□□ -0.62
POLR2J3-215ENST00000511313 WRNIP1Q96S55 665 aa11.18□□□□□ -0.62
POLR2J3-215ENST00000511313 CEP89Q96ST8 783 aa11.18□□□□□ -0.62
POLR2J3-215ENST00000511313 FERMT2Q96AC1 680 aa11.18□□□□□ -0.62
POLR2J3-215ENST00000511313 MAF1Q9H063 256 aa11.18□□□□□ -0.62
POLR2J3-215ENST00000511313 CCDC39Q9UFE4 941 aa11.18□□□□□ -0.62
POLR2J3-215ENST00000511313 CCDC171Q6TFL3 1326 aa11.18□□□□□ -0.62
POLR2J3-215ENST00000511313 UBN2Q6ZU65 1347 aa11.18□□□□□ -0.62
POLR2J3-215ENST00000511313 USP17L10C9JJH3 530 aa11.18□□□□□ -0.62
POLR2J3-215ENST00000511313 KBTBD13C9JR72 458 aa11.18□□□□□ -0.62
POLR2J3-215ENST00000511313 GYG1P46976 350 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms