RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 ANKRD13AQ8IZ07 590 aa16.99■□□□□ 0.31
DDX41-212ENST00000511040 OTUD7AQ8TE49 926 aaPredicted RBP16.99■□□□□ 0.31
DDX41-212ENST00000511040 WNK4Q96J92 1243 aa16.99■□□□□ 0.31
DDX41-212ENST00000511040 CSRNP1Q96S65 589 aa16.99■□□□□ 0.31
DDX41-212ENST00000511040 HAUS7Q99871 368 aa16.99■□□□□ 0.31
DDX41-212ENST00000511040 ECHDC1Q9NTX5 307 aa16.99■□□□□ 0.31
DDX41-212ENST00000511040 PAG1Q9NWQ8 432 aa16.99■□□□□ 0.31
DDX41-212ENST00000511040 DOCK2Q92608 1830 aa16.98■□□□□ 0.31
DDX41-212ENST00000511040 VGLL4Q14135 290 aa16.98■□□□□ 0.31
DDX41-212ENST00000511040 ANKRD45Q5TZF3 282 aa16.98■□□□□ 0.31
DDX41-212ENST00000511040 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.98■□□□□ 0.31
DDX41-212ENST00000511040 CNKSR2Q8WXI2 1034 aa16.98■□□□□ 0.31
DDX41-212ENST00000511040 ZKSCAN4Q969J2 545 aaPredicted RBP16.98■□□□□ 0.31
DDX41-212ENST00000511040 HOOK2Q96ED9 719 aa16.98■□□□□ 0.31
DDX41-212ENST00000511040 WRNIP1Q96S55 665 aa16.98■□□□□ 0.31
DDX41-212ENST00000511040 ZNF341Q9BYN7 854 aa16.98■□□□□ 0.31
DDX41-212ENST00000511040 HSPA8P11142 646 aaKnown RBP16.97■□□□□ 0.31
DDX41-212ENST00000511040 PDE6AP16499 860 aa16.97■□□□□ 0.31
DDX41-212ENST00000511040 GJA5P36382 358 aa16.97■□□□□ 0.31
DDX41-212ENST00000511040 CTCFP49711 727 aaPredicted RBP16.97■□□□□ 0.31
DDX41-212ENST00000511040 LBX1P52954 281 aa16.97■□□□□ 0.31
DDX41-212ENST00000511040 PPP4CP60510 307 aa16.97■□□□□ 0.31
DDX41-212ENST00000511040 AAMPQ13685 434 aa16.97■□□□□ 0.31
DDX41-212ENST00000511040 SLFNL1Q499Z3 407 aa16.97■□□□□ 0.31
DDX41-212ENST00000511040 SLC9C2Q5TAH2 1124 aa16.97■□□□□ 0.31
DDX41-212ENST00000511040 MAPKAPK5Q8IW41 473 aa16.97■□□□□ 0.31
DDX41-212ENST00000511040 TGFBRAP1Q8WUH2 860 aa16.97■□□□□ 0.31
DDX41-212ENST00000511040 GPATCH3Q96I76 525 aa16.97■□□□□ 0.31
DDX41-212ENST00000511040 CSADQ9Y600 493 aa16.97■□□□□ 0.31
DDX41-212ENST00000511040 MAP4K4O95819 1239 aaPredicted RBP16.96■□□□□ 0.31
DDX41-212ENST00000511040 IGHDP01880 384 aa16.96■□□□□ 0.31
DDX41-212ENST00000511040 PLCG2P16885 1265 aa16.96■□□□□ 0.31
DDX41-212ENST00000511040 INPP5BP32019 993 aa16.96■□□□□ 0.31
DDX41-212ENST00000511040 OPTNQ96CV9 577 aa16.96■□□□□ 0.31
DDX41-212ENST00000511040 OSBPL5Q9H0X9 879 aaPredicted RBP16.96■□□□□ 0.31
DDX41-212ENST00000511040 ZBTB47Q9UFB7 747 aaPredicted RBP16.96■□□□□ 0.31
DDX41-212ENST00000511040 ZNF532Q9HCE3 1301 aa16.96■□□□□ 0.3
DDX41-212ENST00000511040 ATRNL1Q5VV63 1379 aa16.95■□□□□ 0.3
DDX41-212ENST00000511040 UNCXA6NJT0 531 aa16.95■□□□□ 0.3
DDX41-212ENST00000511040 FAM196BA6NMK8 535 aa16.95■□□□□ 0.3
DDX41-212ENST00000511040 CHGBP05060 677 aa16.95■□□□□ 0.3
DDX41-212ENST00000511040 GCC1Q96CN9 775 aa16.95■□□□□ 0.3
DDX41-212ENST00000511040 RWDD1Q9H446 243 aaPredicted RBP16.95■□□□□ 0.3
DDX41-212ENST00000511040 SAP30BPQ9UHR5 308 aaKnown RBP16.95■□□□□ 0.3
DDX41-212ENST00000511040 SNCAIPQ9Y6H5 919 aa16.95■□□□□ 0.3
DDX41-212ENST00000511040 TCRBV5S4A2TA0A5A2 114 aa16.94■□□□□ 0.3
DDX41-212ENST00000511040 IGSF3O75054 1194 aa16.94■□□□□ 0.3
DDX41-212ENST00000511040 NPM3O75607 178 aaKnown RBP16.94■□□□□ 0.3
DDX41-212ENST00000511040 TRPA1O75762 1119 aa16.94■□□□□ 0.3
DDX41-212ENST00000511040 SLC4A8Q2Y0W8 1093 aa16.94■□□□□ 0.3
DDX41-212ENST00000511040 COL13A1Q5TAT6 717 aaPredicted RBP16.94■□□□□ 0.3
DDX41-212ENST00000511040 B4GALNT3Q6L9W6 998 aa16.94■□□□□ 0.3
DDX41-212ENST00000511040 OTUD5Q96G74 571 aa16.94■□□□□ 0.3
DDX41-212ENST00000511040 RNF186Q9NXI6 227 aa16.94■□□□□ 0.3
DDX41-212ENST00000511040 FLT1P17948 1338 aa16.94■□□□□ 0.3
DDX41-212ENST00000511040 CDK5RAP2Q96SN8 1893 aa16.93■□□□□ 0.3
DDX41-212ENST00000511040 MAGEB6P1A0A0J9YX57 407 aa16.93■□□□□ 0.3
DDX41-212ENST00000511040 ZNF112Q9UJU3 913 aa16.93■□□□□ 0.3
DDX41-212ENST00000511040 PHF20L1A8MW92 1017 aa16.92■□□□□ 0.3
DDX41-212ENST00000511040 CA12O43570 354 aa16.92■□□□□ 0.3
DDX41-212ENST00000511040 ZBTB48P10074 688 aaPredicted RBP16.92■□□□□ 0.3
DDX41-212ENST00000511040 MX1P20591 662 aa16.92■□□□□ 0.3
DDX41-212ENST00000511040 ADD2P35612 726 aa16.92■□□□□ 0.3
DDX41-212ENST00000511040 USP5P45974 858 aa16.92■□□□□ 0.3
DDX41-212ENST00000511040 SREBF2Q12772 1141 aa16.92■□□□□ 0.3
DDX41-212ENST00000511040 REM2Q8IYK8 340 aaPredicted RBP16.92■□□□□ 0.3
DDX41-212ENST00000511040 RIOK1Q9BRS2 568 aaKnown RBP16.92■□□□□ 0.3
DDX41-212ENST00000511040 LNPKQ9C0E8 428 aa16.92■□□□□ 0.3
DDX41-212ENST00000511040 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.92■□□□□ 0.32e-6■□□□□ 10.6
DDX41-212ENST00000511040 PALD1Q9ULE6 856 aa16.92■□□□□ 0.3
DDX41-212ENST00000511040 MANSC4A6NHS7 340 aaPredicted RBP16.91■□□□□ 0.3
DDX41-212ENST00000511040 SPDYE5A6NIY4 337 aa16.91■□□□□ 0.3
DDX41-212ENST00000511040 TM4SF4P48230 202 aa16.91■□□□□ 0.3
DDX41-212ENST00000511040 SMC5Q8IY18 1101 aa16.91■□□□□ 0.3
DDX41-212ENST00000511040 LCORLQ8N3X6 602 aa16.91■□□□□ 0.3
DDX41-212ENST00000511040 PI4K2BQ8TCG2 481 aa16.91■□□□□ 0.3
DDX41-212ENST00000511040 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.91■□□□□ 0.3
DDX41-212ENST00000511040 TTC41PQ6P2S7 1318 aa16.91■□□□□ 0.3
DDX41-212ENST00000511040 TMED8Q6PL24 325 aaPredicted RBP16.9■□□□□ 0.3
DDX41-212ENST00000511040 ERO1BQ86YB8 467 aa16.9■□□□□ 0.3
DDX41-212ENST00000511040 ARMT1Q9H993 441 aa16.9■□□□□ 0.3
DDX41-212ENST00000511040 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.9■□□□□ 0.3
DDX41-212ENST00000511040 FOCADQ5VW36 1801 aa16.9■□□□□ 0.3
DDX41-212ENST00000511040 COL2A1P02458 1487 aaPredicted RBP16.9■□□□□ 0.3
DDX41-212ENST00000511040 ERC2O15083 957 aa16.89■□□□□ 0.29
DDX41-212ENST00000511040 GLRX3O76003 335 aaKnown RBP16.89■□□□□ 0.29
DDX41-212ENST00000511040 MBD4O95243 580 aa16.89■□□□□ 0.29
DDX41-212ENST00000511040 TBC1D8O95759 1140 aa16.89■□□□□ 0.29
DDX41-212ENST00000511040 MAP3K10Q02779 954 aa16.89■□□□□ 0.29
DDX41-212ENST00000511040 IFNL1Q8IU54 200 aa16.89■□□□□ 0.29
DDX41-212ENST00000511040 CERS3Q8IU89 383 aa16.89■□□□□ 0.29
DDX41-212ENST00000511040 PRDM10Q9NQV6 1147 aa16.89■□□□□ 0.29
DDX41-212ENST00000511040 SAGE1Q9NXZ1 904 aa16.89■□□□□ 0.29
DDX41-212ENST00000511040 PI4KBQ9UBF8 816 aa16.89■□□□□ 0.29
DDX41-212ENST00000511040 SALL3Q9BXA9 1300 aa16.89■□□□□ 0.29
DDX41-212ENST00000511040 MYH7P12883 1935 aa16.88■□□□□ 0.29
DDX41-212ENST00000511040 IGF2BP3O00425 579 aaKnown RBP eCLIP16.88■□□□□ 0.29
DDX41-212ENST00000511040 IRF6O14896 467 aa16.88■□□□□ 0.29
DDX41-212ENST00000511040 PRKAB2O43741 272 aa16.88■□□□□ 0.29
DDX41-212ENST00000511040 TBC1D12O60347 775 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms