RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 CREBZFQ9NS37 354 aa14.59□□□□□ -0.07
LIN54-210ENST00000510877 CCDC34Q96HJ3 373 aa14.59□□□□□ -0.07
LIN54-210ENST00000510877 FAM84BQ96KN1 310 aaPredicted RBP14.59□□□□□ -0.07
LIN54-210ENST00000510877 H3BQV1 296 aa14.58□□□□□ -0.07
LIN54-210ENST00000510877 IFFO2Q5TF58 517 aa14.58□□□□□ -0.07
LIN54-210ENST00000510877 PRDX5P30044 214 aa14.58□□□□□ -0.08
LIN54-210ENST00000510877 CA8P35219 290 aa14.58□□□□□ -0.08
LIN54-210ENST00000510877 KIFC2Q96AC6 838 aa14.58□□□□□ -0.08
LIN54-210ENST00000510877 ADORA1P30542 326 aa14.58□□□□□ -0.08
LIN54-210ENST00000510877 GOLGA6L6A8MZA4 724 aa14.58□□□□□ -0.08
LIN54-210ENST00000510877 PTPDC1A2A3K4 754 aa14.57□□□□□ -0.08
LIN54-210ENST00000510877 EP400NLQ6ZTU2 488 aa14.57□□□□□ -0.08
LIN54-210ENST00000510877 CHD1LQ86WJ1 897 aa14.57□□□□□ -0.08
LIN54-210ENST00000510877 HSCBQ8IWL3 235 aa14.57□□□□□ -0.08
LIN54-210ENST00000510877 WDR33Q9C0J8 1336 aaKnown RBP14.57□□□□□ -0.08
LIN54-210ENST00000510877 MCTP1Q6DN14 999 aa14.57□□□□□ -0.08
LIN54-210ENST00000510877 ZNF532Q9HCE3 1301 aa14.57□□□□□ -0.08
LIN54-210ENST00000510877 TRPM4Q8TD43 1214 aa14.56□□□□□ -0.08
LIN54-210ENST00000510877 AP5M1Q9H0R1 490 aa14.56□□□□□ -0.08
LIN54-210ENST00000510877 CLIP2Q9UDT6 1046 aa14.56□□□□□ -0.08
LIN54-210ENST00000510877 USP17L10C9JJH3 530 aa14.56□□□□□ -0.08
LIN54-210ENST00000510877 CEP85Q6P2H3 762 aa14.56□□□□□ -0.08
LIN54-210ENST00000510877 PLA2G12BQ9BX93 195 aa14.56□□□□□ -0.08
LIN54-210ENST00000510877 TMEM39BQ9GZU3 492 aa14.56□□□□□ -0.08
LIN54-210ENST00000510877 PALD1Q9ULE6 856 aa14.56□□□□□ -0.08
LIN54-210ENST00000510877 ZHX1Q9UKY1 873 aaPredicted RBP14.56□□□□□ -0.08
LIN54-210ENST00000510877 USP17L12C9JPN9 530 aa14.56□□□□□ -0.08
LIN54-210ENST00000510877 USP17L21D6R901 530 aa14.56□□□□□ -0.08
LIN54-210ENST00000510877 PDIA6Q15084 440 aa14.56□□□□□ -0.08
LIN54-210ENST00000510877 FAM151AQ8WW52 585 aa14.56□□□□□ -0.08
LIN54-210ENST00000510877 KRT23Q9C075 422 aa14.56□□□□□ -0.08
LIN54-210ENST00000510877 RRP9O43818 475 aaKnown RBP14.55□□□□□ -0.08
LIN54-210ENST00000510877 LBX1P52954 281 aa14.55□□□□□ -0.08
LIN54-210ENST00000510877 C3orf67Q6ZVT6 689 aa14.55□□□□□ -0.08
LIN54-210ENST00000510877 CDC45O75419 566 aa14.55□□□□□ -0.08
LIN54-210ENST00000510877 PRDM1O75626 825 aa14.55□□□□□ -0.08
LIN54-210ENST00000510877 CCDC82Q8N4S0 544 aa14.55□□□□□ -0.08
LIN54-210ENST00000510877 MED23Q9ULK4 1368 aa14.55□□□□□ -0.08
LIN54-210ENST00000510877 CCDC196A0A1B0GTZ2 297 aa14.55□□□□□ -0.08
LIN54-210ENST00000510877 WNT10BO00744 389 aa14.55□□□□□ -0.08
LIN54-210ENST00000510877 ATP2B1P20020 1258 aa14.55□□□□□ -0.08
LIN54-210ENST00000510877 TSHZ3Q63HK5 1081 aa14.55□□□□□ -0.08
LIN54-210ENST00000510877 MECOMQ03112 1051 aa14.54□□□□□ -0.08
LIN54-210ENST00000510877 SMARCC2Q8TAQ2 1214 aa14.54□□□□□ -0.08
LIN54-210ENST00000510877 ST18O60284 1047 aa14.54□□□□□ -0.08
LIN54-210ENST00000510877 KRT32Q14532 448 aa14.54□□□□□ -0.08
LIN54-210ENST00000510877 IFIT1BQ5T764 474 aaKnown RBP14.54□□□□□ -0.08
LIN54-210ENST00000510877 TRMT1LQ7Z2T5 733 aaKnown RBP14.54□□□□□ -0.08
LIN54-210ENST00000510877 CKAP2LQ8IYA6 745 aa14.54□□□□□ -0.08
LIN54-210ENST00000510877 FAM43AQ8N2R8 423 aa14.54□□□□□ -0.08
LIN54-210ENST00000510877 PRMT6Q96LA8 375 aaPredicted RBP14.54□□□□□ -0.08
LIN54-210ENST00000510877 CNNM2Q9H8M5 875 aa14.54□□□□□ -0.08
LIN54-210ENST00000510877 PNMA6EA0A0J9YXQ4 647 aa14.54□□□□□ -0.08
LIN54-210ENST00000510877 SF3A1Q15459 793 aaKnown RBP14.54□□□□□ -0.08
LIN54-210ENST00000510877 EPHA10Q5JZY3 1008 aa14.54□□□□□ -0.08
LIN54-210ENST00000510877 SPICE1Q8N0Z3 855 aa14.54□□□□□ -0.08
LIN54-210ENST00000510877 APPBP2Q92624 585 aa14.54□□□□□ -0.08
LIN54-210ENST00000510877 OPTNQ96CV9 577 aa14.54□□□□□ -0.08
LIN54-210ENST00000510877 TRIM47Q96LD4 638 aa14.54□□□□□ -0.08
LIN54-210ENST00000510877 HOXC10Q9NYD6 342 aa14.54□□□□□ -0.08
LIN54-210ENST00000510877 ARPP21Q9UBL0 812 aaPredicted RBP14.54□□□□□ -0.08
LIN54-210ENST00000510877 SWAP70Q9UH65 585 aa14.54□□□□□ -0.08
LIN54-210ENST00000510877 HDLBPQ00341 1268 aaKnown RBP14.54□□□□□ -0.08
LIN54-210ENST00000510877 SP3Q02447 781 aa14.54□□□□□ -0.08
LIN54-210ENST00000510877 RASGRF1Q13972 1273 aa14.54□□□□□ -0.08
LIN54-210ENST00000510877 CRY2Q49AN0 593 aa14.54□□□□□ -0.08
LIN54-210ENST00000510877 NBPF12Q5TAG4 269 aaPredicted RBP14.54□□□□□ -0.08
LIN54-210ENST00000510877 KRI1Q8N9T8 703 aaKnown RBP14.54□□□□□ -0.08
LIN54-210ENST00000510877 PRDM5Q9NQX1 630 aaPredicted RBP14.54□□□□□ -0.08
LIN54-210ENST00000510877 SPDYE2BA6NHP3 402 aa14.53□□□□□ -0.08
LIN54-210ENST00000510877 SPDYE6P0CI01 402 aa14.53□□□□□ -0.08
LIN54-210ENST00000510877 ALAS1P13196 640 aa14.53□□□□□ -0.08
LIN54-210ENST00000510877 MAP2K2P36507 400 aa14.53□□□□□ -0.08
LIN54-210ENST00000510877 PTPN12Q05209 780 aaKnown RBP14.53□□□□□ -0.08
LIN54-210ENST00000510877 HHIPL2Q6UWX4 724 aa14.53□□□□□ -0.08
LIN54-210ENST00000510877 AMIGO3Q86WK7 504 aa14.53□□□□□ -0.08
LIN54-210ENST00000510877 GPCPD1Q9NPB8 672 aa14.53□□□□□ -0.08
LIN54-210ENST00000510877 SLC12A7Q9Y666 1083 aa14.53□□□□□ -0.08
LIN54-210ENST00000510877 LTBP3Q9NS15 1303 aa14.53□□□□□ -0.08
LIN54-210ENST00000510877 ZEB2O60315 1214 aa14.53□□□□□ -0.08
LIN54-210ENST00000510877 VIL1P09327 827 aaKnown RBP14.53□□□□□ -0.08
LIN54-210ENST00000510877 HMGCS2P54868 508 aa14.53□□□□□ -0.08
LIN54-210ENST00000510877 CCDC129Q6ZRS4 1044 aa14.53□□□□□ -0.08
LIN54-210ENST00000510877 GH2P01242 217 aa14.53□□□□□ -0.08
LIN54-210ENST00000510877 TMEM67Q5HYA8 995 aa14.53□□□□□ -0.08
LIN54-210ENST00000510877 CHST3Q7LGC8 479 aa14.53□□□□□ -0.08
LIN54-210ENST00000510877 DHX37Q8IY37 1157 aaKnown RBP14.53□□□□□ -0.08
LIN54-210ENST00000510877 HERC5Q9UII4 1024 aaKnown RBP14.53□□□□□ -0.08
LIN54-210ENST00000510877 CYP2B6P20813 491 aa14.53□□□□□ -0.08
LIN54-210ENST00000510877 GNAQP50148 359 aa14.53□□□□□ -0.08
LIN54-210ENST00000510877 MCMDC2Q4G0Z9 681 aa14.53□□□□□ -0.08
LIN54-210ENST00000510877 HMG20BQ9P0W2 317 aa14.53□□□□□ -0.08
LIN54-210ENST00000510877 PNMA2Q9UL42 364 aa14.53□□□□□ -0.08
LIN54-210ENST00000510877 PIK3C2AO00443 1686 aa14.52□□□□□ -0.08
LIN54-210ENST00000510877 MTIF3Q9H2K0 278 aaKnown RBP14.52□□□□□ -0.08
LIN54-210ENST00000510877 SAMM50Q9Y512 469 aa14.52□□□□□ -0.08
LIN54-210ENST00000510877 NOP56O00567 594 aaKnown RBP14.52□□□□□ -0.09
LIN54-210ENST00000510877 PDE6AP16499 860 aa14.52□□□□□ -0.09
LIN54-210ENST00000510877 TPM2P07951 284 aa14.52□□□□□ -0.09
LIN54-210ENST00000510877 RNF208Q9H0X6 261 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms