RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, human

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNF8-208	ENST00000510195	BTBD19	C9JJ37	291 aa		32.79	■■■□□ 2.84
SNF8-208	ENST00000510195	TLR2	O60603	784 aa		32.79	■■■□□ 2.84
SNF8-208	ENST00000510195	OS9	Q13438	667 aa	Predicted RBP	32.79	■■■□□ 2.84
SNF8-208	ENST00000510195	TNNI3K	Q59H18	835 aa		32.79	■■■□□ 2.84
SNF8-208	ENST00000510195	NOP58	Q9Y2X3	529 aa	Known RBP	32.79	■■■□□ 2.84
SNF8-208	ENST00000510195	FPGT-TNNI3K	V9GXZ4	949 aa		32.79	■■■□□ 2.84
SNF8-208	ENST00000510195	IGSF3	O75054	1194 aa		32.78	■■■□□ 2.84
SNF8-208	ENST00000510195	SURF6	O75683	361 aa	Known RBP	32.78	■■■□□ 2.84
SNF8-208	ENST00000510195	RLBP1	P12271	317 aa		32.78	■■■□□ 2.84
SNF8-208	ENST00000510195	MCAM	P43121	646 aa		32.78	■■■□□ 2.84
SNF8-208	ENST00000510195	CCDC158	Q5M9N0	1113 aa		32.78	■■■□□ 2.84
SNF8-208	ENST00000510195	PHF20L1	A8MW92	1017 aa		32.77	■■■□□ 2.84
SNF8-208	ENST00000510195	RHBDL3	P58872	404 aa		32.77	■■■□□ 2.84
SNF8-208	ENST00000510195	PI16	Q6UXB8	463 aa		32.77	■■■□□ 2.84
SNF8-208	ENST00000510195	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	32.77	■■■□□ 2.84
SNF8-208	ENST00000510195	ZNF384	Q8TF68	577 aa		32.77	■■■□□ 2.84
SNF8-208	ENST00000510195	SH3BP5L	Q7L8J4	393 aa		32.76	■■■□□ 2.83
SNF8-208	ENST00000510195	ANKRD23	Q86SG2	305 aa		32.76	■■■□□ 2.83
SNF8-208	ENST00000510195	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	32.76	■■■□□ 2.83
SNF8-208	ENST00000510195	ZNF512B	Q96KM6	892 aa	Predicted RBP	32.76	■■■□□ 2.83
SNF8-208	ENST00000510195	DOCK2	Q92608	1830 aa		32.75	■■■□□ 2.83
SNF8-208	ENST00000510195	CXCL11	O14625	94 aa		32.75	■■■□□ 2.83
SNF8-208	ENST00000510195	TBC1D9	Q6ZT07	1266 aa		32.75	■■■□□ 2.83
SNF8-208	ENST00000510195	DDX4	Q9NQI0	724 aa	Known RBP	32.75	■■■□□ 2.83
SNF8-208	ENST00000510195	RAI14	Q9P0K7	980 aa		32.75	■■■□□ 2.83
SNF8-208	ENST00000510195	LRP2BP	Q9P2M1	347 aa		32.75	■■■□□ 2.83
SNF8-208	ENST00000510195	CENPF	P49454	3210 aa		32.74	■■■□□ 2.83
SNF8-208	ENST00000510195	MS4A1	P11836	297 aa		32.74	■■■□□ 2.83
SNF8-208	ENST00000510195	TTC39A	Q5SRH9	613 aa		32.74	■■■□□ 2.83
SNF8-208	ENST00000510195	C1orf115	Q9H7X2	142 aa		32.74	■■■□□ 2.83
SNF8-208	ENST00000510195	DDTL	A6NHG4	134 aa	Predicted RBP	32.73	■■■□□ 2.83
SNF8-208	ENST00000510195	TBC1D12	O60347	775 aa		32.73	■■■□□ 2.83
SNF8-208	ENST00000510195	SCYL3	Q8IZE3	742 aa		32.73	■■■□□ 2.83
SNF8-208	ENST00000510195	PDE4DIP	Q5VU43	2346 aa		32.73	■■■□□ 2.83
SNF8-208	ENST00000510195	PICALM	Q13492	652 aa		32.72	■■■□□ 2.83
SNF8-208	ENST00000510195	PICK1	Q9NRD5	415 aa		32.72	■■■□□ 2.83
SNF8-208	ENST00000510195	CTNND1	O60716	968 aa	Known RBP	32.71	■■■□□ 2.83
SNF8-208	ENST00000510195	GNRH1	P01148	92 aa		32.71	■■■□□ 2.83
SNF8-208	ENST00000510195	KIF22	Q14807	665 aa		32.71	■■■□□ 2.83
SNF8-208	ENST00000510195	DBNDD2	Q9BQY9	259 aa		32.71	■■■□□ 2.83
SNF8-208	ENST00000510195	COL2A1	P02458	1487 aa	Predicted RBP	32.71	■■■□□ 2.83
SNF8-208	ENST00000510195	PDHX	O00330	501 aa		32.69	■■■□□ 2.82
SNF8-208	ENST00000510195	PTPRA	P18433	802 aa		32.69	■■■□□ 2.82
SNF8-208	ENST00000510195	CAP1	Q01518	475 aa		32.69	■■■□□ 2.82
SNF8-208	ENST00000510195	MOGS	Q13724	837 aa		32.69	■■■□□ 2.82
SNF8-208	ENST00000510195	ARMC5	Q96C12	935 aa		32.69	■■■□□ 2.82
SNF8-208	ENST00000510195	NOL10	Q9BSC4	688 aa	Known RBP	32.69	■■■□□ 2.82
SNF8-208	ENST00000510195	LACTB	P83111	547 aa	Predicted RBP	32.68	■■■□□ 2.82
SNF8-208	ENST00000510195	CEP85	Q6P2H3	762 aa		32.68	■■■□□ 2.82
SNF8-208	ENST00000510195	C17orf99	Q6UX52	265 aa		32.68	■■■□□ 2.82
SNF8-208	ENST00000510195	ZHX2	Q9Y6X8	837 aa		32.68	■■■□□ 2.82
SNF8-208	ENST00000510195	BAG3	O95817	575 aa		32.67	■■■□□ 2.82
SNF8-208	ENST00000510195	FASTKD5	Q7L8L6	764 aa	Known RBP	32.67	■■■□□ 2.82
SNF8-208	ENST00000510195	PLCG2	P16885	1265 aa		32.66	■■■□□ 2.82
SNF8-208	ENST00000510195	NAA16	Q6N069	864 aa	Predicted RBP	32.66	■■■□□ 2.82
SNF8-208	ENST00000510195	ERC1	Q8IUD2	1116 aa		32.66	■■■□□ 2.82
SNF8-208	ENST00000510195	OSBPL5	Q9H0X9	879 aa	Predicted RBP	32.66	■■■□□ 2.82
SNF8-208	ENST00000510195	SNRK	Q9NRH2	765 aa		32.66	■■■□□ 2.82
SNF8-208	ENST00000510195	AFG3L2	Q9Y4W6	797 aa		32.66	■■■□□ 2.82
SNF8-208	ENST00000510195		A0A0G2JLL6	359 aa	Predicted RBP	32.65	■■■□□ 2.82
SNF8-208	ENST00000510195	CYP2E1	P05181	493 aa	Predicted RBP	32.65	■■■□□ 2.82
SNF8-208	ENST00000510195	PPP4C	P60510	307 aa		32.65	■■■□□ 2.82
SNF8-208	ENST00000510195	PRRT2	Q7Z6L0	340 aa	Predicted RBP	32.65	■■■□□ 2.82
SNF8-208	ENST00000510195	NBPF11	Q86T75	865 aa		32.65	■■■□□ 2.82
SNF8-208	ENST00000510195	PANK1	Q8TE04	598 aa		32.65	■■■□□ 2.82
SNF8-208	ENST00000510195	DBNL	Q9UJU6	430 aa	Known RBP	32.65	■■■□□ 2.82
SNF8-208	ENST00000510195	PRMT2	P55345	433 aa		32.64	■■■□□ 2.82
SNF8-208	ENST00000510195	TEX11	Q8IYF3	940 aa		32.64	■■■□□ 2.82
SNF8-208	ENST00000510195	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	32.64	■■■□□ 2.82
SNF8-208	ENST00000510195	HSP90AB4P	Q58FF6	505 aa		32.63	■■■□□ 2.81
SNF8-208	ENST00000510195	GPAT2	Q6NUI2	795 aa		32.63	■■■□□ 2.81
SNF8-208	ENST00000510195	EAF2	Q96CJ1	260 aa	Predicted RBP	32.63	■■■□□ 2.81
SNF8-208	ENST00000510195	PARK7	Q99497	189 aa	Known RBP	32.63	■■■□□ 2.81
SNF8-208	ENST00000510195	DHX36	Q9H2U1	1008 aa	Known RBP	32.63	■■■□□ 2.81
SNF8-208	ENST00000510195	SLC45A1	Q9Y2W3	748 aa		32.63	■■■□□ 2.81
SNF8-208	ENST00000510195	ADGRA2	Q96PE1	1338 aa		32.62	■■■□□ 2.81
SNF8-208	ENST00000510195	HERC5	Q9UII4	1024 aa	Known RBP	32.62	■■■□□ 2.81
SNF8-208	ENST00000510195	DOCK1	Q14185	1865 aa		32.61	■■■□□ 2.81
SNF8-208	ENST00000510195	TBC1D2	Q9BYX2	928 aa		32.61	■■■□□ 2.81
SNF8-208	ENST00000510195	MAST2	Q6P0Q8	1798 aa		32.6	■■■□□ 2.81
SNF8-208	ENST00000510195	ZAP70	P43403	619 aa		32.6	■■■□□ 2.81
SNF8-208	ENST00000510195	SLC9C1	Q4G0N8	1177 aa		32.6	■■■□□ 2.81
SNF8-208	ENST00000510195	TMED8	Q6PL24	325 aa	Predicted RBP	32.6	■■■□□ 2.81
SNF8-208	ENST00000510195	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	32.6	■■■□□ 2.81
SNF8-208	ENST00000510195	CCDC8	Q9H0W5	538 aa	Predicted RBP	32.6	■■■□□ 2.81
SNF8-208	ENST00000510195	AATF	Q9NY61	560 aa	Known RBP eCLIP	32.6	■■■□□ 2.81	8e-6	■■■■□ 21.3
SNF8-208	ENST00000510195	CPA4	Q9UI42	421 aa		32.6	■■■□□ 2.81
SNF8-208	ENST00000510195	PTCH2	Q9Y6C5	1203 aa		32.6	■■■□□ 2.81
SNF8-208	ENST00000510195	KIAA0100	Q14667	2235 aa	Known RBP	32.59	■■■□□ 2.81
SNF8-208	ENST00000510195	ZNF333	Q96JL9	665 aa		32.59	■■■□□ 2.81
SNF8-208	ENST00000510195	ARHGAP39	Q9C0H5	1083 aa		32.59	■■■□□ 2.81
SNF8-208	ENST00000510195	PI4KB	Q9UBF8	816 aa		32.59	■■■□□ 2.81
SNF8-208	ENST00000510195	DDX19B	Q9UMR2	479 aa		32.59	■■■□□ 2.81
SNF8-208	ENST00000510195	BRCA2	P51587	3418 aa		32.58	■■■□□ 2.81
SNF8-208	ENST00000510195	HOXD10	P28358	340 aa		32.58	■■■□□ 2.81
SNF8-208	ENST00000510195	CERS3	Q8IU89	383 aa		32.58	■■■□□ 2.81
SNF8-208	ENST00000510195	RPAP2	Q8IXW5	612 aa	Predicted RBP	32.58	■■■□□ 2.81
SNF8-208	ENST00000510195	CHMP4B	Q9H444	224 aa	Known RBP	32.58	■■■□□ 2.81
SNF8-208	ENST00000510195	TLR7	Q9NYK1	1049 aa	Known RBP	32.58	■■■□□ 2.81
SNF8-208	ENST00000510195	RBBP6	Q7Z6E9	1792 aa	Known RBP	32.58	■■■□□ 2.81

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms