RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 GPR101Q96P66 508 aaPredicted RBP5.91□□□□□ -1.46
PHF3-210ENST00000509876 PAGR1Q9BTK6 254 aa5.91□□□□□ -1.46
PHF3-210ENST00000509876 PNMA3Q9UL41 463 aa5.91□□□□□ -1.46
PHF3-210ENST00000509876 ICA1Q05084 483 aa5.91□□□□□ -1.46
PHF3-210ENST00000509876 RAB11FIP4Q86YS3 637 aa5.91□□□□□ -1.46
PHF3-210ENST00000509876 ZNF341Q9BYN7 854 aa5.91□□□□□ -1.46
PHF3-210ENST00000509876 PTPDC1A2A3K4 754 aa5.91□□□□□ -1.46
PHF3-210ENST00000509876 MBD3O95983 291 aa5.91□□□□□ -1.46
PHF3-210ENST00000509876 IGKV5-2P06315 115 aa5.91□□□□□ -1.46
PHF3-210ENST00000509876 CTDSPL2Q05D32 466 aa5.91□□□□□ -1.46
PHF3-210ENST00000509876 CCDC129Q6ZRS4 1044 aa5.91□□□□□ -1.46
PHF3-210ENST00000509876 NTSR2O95665 410 aa5.9□□□□□ -1.46
PHF3-210ENST00000509876 SMIM5Q71RC9 77 aa5.9□□□□□ -1.46
PHF3-210ENST00000509876 KRT26Q7Z3Y9 468 aa5.9□□□□□ -1.46
PHF3-210ENST00000509876 CD209Q9NNX6 404 aa5.9□□□□□ -1.46
PHF3-210ENST00000509876 SUGT1Q9Y2Z0 365 aa5.9□□□□□ -1.46
PHF3-210ENST00000509876 ZNF521Q96K83 1311 aa5.9□□□□□ -1.46
PHF3-210ENST00000509876 AMPD3Q01432 767 aa5.9□□□□□ -1.46
PHF3-210ENST00000509876 PPP2R5BQ15173 497 aa5.9□□□□□ -1.46
PHF3-210ENST00000509876 SYCP1Q15431 976 aa5.9□□□□□ -1.46
PHF3-210ENST00000509876 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.9□□□□□ -1.46
PHF3-210ENST00000509876 EAF2Q96CJ1 260 aaPredicted RBP5.9□□□□□ -1.46
PHF3-210ENST00000509876 NOD1Q9Y239 953 aa5.9□□□□□ -1.46
PHF3-210ENST00000509876 ABCC6O95255 1503 aa5.9□□□□□ -1.46
PHF3-210ENST00000509876 MSNP26038 577 aaKnown RBP5.9□□□□□ -1.46
PHF3-210ENST00000509876 TFAP4Q01664 338 aa5.9□□□□□ -1.46
PHF3-210ENST00000509876 PTPN12Q05209 780 aaKnown RBP5.9□□□□□ -1.46
PHF3-210ENST00000509876 NCBP1Q09161 790 aaKnown RBP5.9□□□□□ -1.46
PHF3-210ENST00000509876 FILIP1LQ4L180 1135 aa5.9□□□□□ -1.46
PHF3-210ENST00000509876 ALG1Q9BT22 464 aa5.9□□□□□ -1.46
PHF3-210ENST00000509876 PI4KBQ9UBF8 816 aa5.9□□□□□ -1.46
PHF3-210ENST00000509876 CLIP2Q9UDT6 1046 aa5.9□□□□□ -1.46
PHF3-210ENST00000509876 NRXN3Q9Y4C0 1643 aa5.9□□□□□ -1.46
PHF3-210ENST00000509876 KDM6AO15550 1401 aaPredicted RBP5.9□□□□□ -1.47
PHF3-210ENST00000509876 AHDC1Q5TGY3 1603 aaPredicted RBP5.9□□□□□ -1.47
PHF3-210ENST00000509876 B4E1Z4 1266 aa5.9□□□□□ -1.47
PHF3-210ENST00000509876 KRT2P35908 639 aa5.9□□□□□ -1.47
PHF3-210ENST00000509876 KIFC2Q96AC6 838 aa5.9□□□□□ -1.47
PHF3-210ENST00000509876 CAMTA1Q9Y6Y1 1673 aa5.9□□□□□ -1.47
PHF3-210ENST00000509876 RBM25P49756 843 aaKnown RBP5.9□□□□□ -1.47
PHF3-210ENST00000509876 CCDC174Q6PII3 467 aa5.9□□□□□ -1.47
PHF3-210ENST00000509876 IFNL3Q8IZI9 196 aa5.9□□□□□ -1.47
PHF3-210ENST00000509876 TBC1D16Q8TBP0 767 aa5.9□□□□□ -1.47
PHF3-210ENST00000509876 TSG101Q99816 390 aa5.9□□□□□ -1.47
PHF3-210ENST00000509876 ZKSCAN3Q9BRR0 538 aa5.9□□□□□ -1.47
PHF3-210ENST00000509876 ANGEL1Q9UNK9 670 aaKnown RBP5.9□□□□□ -1.47
PHF3-210ENST00000509876 HSP90AA2PQ14568 343 aaPredicted RBP5.89□□□□□ -1.47
PHF3-210ENST00000509876 CT47A1Q5JQC4 288 aaPredicted RBP5.89□□□□□ -1.47
PHF3-210ENST00000509876 MICALL2Q8IY33 904 aa5.89□□□□□ -1.47
PHF3-210ENST00000509876 USP17L12C9JPN9 530 aa5.89□□□□□ -1.47
PHF3-210ENST00000509876 USP17L21D6R901 530 aa5.89□□□□□ -1.47
PHF3-210ENST00000509876 MMP14P50281 582 aa5.89□□□□□ -1.47
PHF3-210ENST00000509876 ATRNO75882 1429 aa5.89□□□□□ -1.47
PHF3-210ENST00000509876 PRDM1O75626 825 aa5.89□□□□□ -1.47
PHF3-210ENST00000509876 GJB2P29033 226 aa5.89□□□□□ -1.47
PHF3-210ENST00000509876 AKNAD1Q5T1N1 836 aa5.89□□□□□ -1.47
PHF3-210ENST00000509876 STRIP1Q5VSL9 837 aa5.89□□□□□ -1.47
PHF3-210ENST00000509876 C9orf131Q5VYM1 1079 aa5.89□□□□□ -1.47
PHF3-210ENST00000509876 RUFY3Q7L099 469 aa5.89□□□□□ -1.47
PHF3-210ENST00000509876 APBB1IPQ7Z5R6 666 aaPredicted RBP5.89□□□□□ -1.47
PHF3-210ENST00000509876 MCF2L2Q86YR7 1114 aa5.89□□□□□ -1.47
PHF3-210ENST00000509876 FOXP4Q8IVH2 680 aaPredicted RBP5.89□□□□□ -1.47
PHF3-210ENST00000509876 CCDC150Q8NCX0 1101 aa5.89□□□□□ -1.47
PHF3-210ENST00000509876 LRRC2Q9BYS8 371 aa5.89□□□□□ -1.47
PHF3-210ENST00000509876 GUCY1B3Q02153 619 aa5.89□□□□□ -1.47
PHF3-210ENST00000509876 NDUFB9Q9Y6M9 179 aa5.89□□□□□ -1.47
PHF3-210ENST00000509876 PXDNLA1KZ92 1463 aa5.89□□□□□ -1.47
PHF3-210ENST00000509876 OFD1O75665 1012 aa5.89□□□□□ -1.47
PHF3-210ENST00000509876 MECOMQ03112 1051 aa5.89□□□□□ -1.47
PHF3-210ENST00000509876 CIZ1Q9ULV3 898 aaPredicted RBP5.89□□□□□ -1.47
PHF3-210ENST00000509876 ADCY9O60503 1353 aa5.89□□□□□ -1.47
PHF3-210ENST00000509876 MAP2P11137 1827 aaKnown RBP5.89□□□□□ -1.47
PHF3-210ENST00000509876 FLOT1O75955 427 aa5.89□□□□□ -1.47
PHF3-210ENST00000509876 MCTP2Q6DN12 878 aa5.89□□□□□ -1.47
PHF3-210ENST00000509876 NCAPG2Q86XI2 1143 aa5.89□□□□□ -1.47
PHF3-210ENST00000509876 TSHZ2Q9NRE2 1034 aa5.89□□□□□ -1.47
PHF3-210ENST00000509876 STK24Q9Y6E0 443 aa5.89□□□□□ -1.47
PHF3-210ENST00000509876 TBCAO75347 108 aaKnown RBP5.88□□□□□ -1.47
PHF3-210ENST00000509876 POLA2Q14181 598 aa5.88□□□□□ -1.47
PHF3-210ENST00000509876 ODF2Q5BJF6 829 aa5.88□□□□□ -1.47
PHF3-210ENST00000509876 CPXCR1Q8N123 301 aa5.88□□□□□ -1.47
PHF3-210ENST00000509876 CNOT7Q9UIV1 285 aaKnown RBP5.88□□□□□ -1.47
PHF3-210ENST00000509876 DBNLQ9UJU6 430 aaKnown RBP5.88□□□□□ -1.47
PHF3-210ENST00000509876 NOP56O00567 594 aaKnown RBP5.88□□□□□ -1.47
PHF3-210ENST00000509876 SLC27A2O14975 620 aa5.88□□□□□ -1.47
PHF3-210ENST00000509876 DKC1O60832 514 aaKnown RBP eCLIP5.88□□□□□ -1.47
PHF3-210ENST00000509876 SASH1O94885 1247 aa5.88□□□□□ -1.47
PHF3-210ENST00000509876 NT5C2P49902 561 aa5.88□□□□□ -1.47
PHF3-210ENST00000509876 KCTD2Q14681 263 aa5.88□□□□□ -1.47
PHF3-210ENST00000509876 FAM227BQ96M60 508 aa5.88□□□□□ -1.47
PHF3-210ENST00000509876 ZSCAN10Q96SZ4 725 aaPredicted RBP5.88□□□□□ -1.47
PHF3-210ENST00000509876 RPAP1Q9BWH6 1393 aaPredicted RBP5.88□□□□□ -1.47
PHF3-210ENST00000509876 MON2Q7Z3U7 1717 aa5.88□□□□□ -1.47
PHF3-210ENST00000509876 IGSF3O75054 1194 aa5.88□□□□□ -1.47
PHF3-210ENST00000509876 TOP1P11387 765 aaKnown RBP5.88□□□□□ -1.47
PHF3-210ENST00000509876 ADCY7P51828 1080 aa5.88□□□□□ -1.47
PHF3-210ENST00000509876 RSBN1LQ6PCB5 846 aaPredicted RBP5.88□□□□□ -1.47
PHF3-210ENST00000509876 NLRX1Q86UT6 975 aa5.88□□□□□ -1.47
PHF3-210ENST00000509876 SDR42E1Q8WUS8 393 aa5.88□□□□□ -1.47
PHF3-210ENST00000509876 SCAND2PQ9GZW5 306 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms