RNA–Protein interactions for RNA: ENST00000509234.1

TRAPPC13-210, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-210ENST00000509234 FAM117BQ6P1L5 589 aa6.9□□□□□ -1.3
TRAPPC13-210ENST00000509234 NEDD1Q8NHV4 660 aa6.9□□□□□ -1.3
TRAPPC13-210ENST00000509234 ZNF296Q8WUU4 475 aaPredicted RBP6.9□□□□□ -1.3
TRAPPC13-210ENST00000509234 EMILIN2Q9BXX0 1053 aa6.9□□□□□ -1.3
TRAPPC13-210ENST00000509234 SAMM50Q9Y512 469 aa6.9□□□□□ -1.3
TRAPPC13-210ENST00000509234 SYNGAP1Q96PV0 1343 aa6.9□□□□□ -1.3
TRAPPC13-210ENST00000509234 LOC100289279A0A1B0GTE1 492 aa6.89□□□□□ -1.31
TRAPPC13-210ENST00000509234 DLGAP3O95886 979 aa6.89□□□□□ -1.31
TRAPPC13-210ENST00000509234 CDC25BP30305 580 aa6.89□□□□□ -1.31
TRAPPC13-210ENST00000509234 ARL4DP49703 201 aa6.89□□□□□ -1.31
TRAPPC13-210ENST00000509234 GSTM4Q03013 218 aa6.89□□□□□ -1.31
TRAPPC13-210ENST00000509234 PTPN11Q06124 597 aaPredicted RBP6.89□□□□□ -1.31
TRAPPC13-210ENST00000509234 LRRC14Q15048 493 aa6.89□□□□□ -1.31
TRAPPC13-210ENST00000509234 LLGL2Q6P1M3 1020 aa6.89□□□□□ -1.31
TRAPPC13-210ENST00000509234 MPRIPQ6WCQ1 1025 aa6.89□□□□□ -1.31
TRAPPC13-210ENST00000509234 FAM196AQ6ZSG2 479 aa6.89□□□□□ -1.31
TRAPPC13-210ENST00000509234 KIAA0825Q8IV33 1275 aa6.89□□□□□ -1.31
TRAPPC13-210ENST00000509234 DDX54Q8TDD1 881 aaKnown RBP6.89□□□□□ -1.31
TRAPPC13-210ENST00000509234 SLC7A3Q8WY07 619 aa6.89□□□□□ -1.31
TRAPPC13-210ENST00000509234 SPON2Q9BUD6 331 aa6.89□□□□□ -1.31
TRAPPC13-210ENST00000509234 PCDHGC5Q9Y5F6 944 aa6.89□□□□□ -1.31
TRAPPC13-210ENST00000509234 ABCC10Q5T3U5 1492 aa6.89□□□□□ -1.31
TRAPPC13-210ENST00000509234 MINDY4BA8MYZ0 360 aa6.88□□□□□ -1.31
TRAPPC13-210ENST00000509234 ZNF862O60290 1169 aa6.88□□□□□ -1.31
TRAPPC13-210ENST00000509234 CILPO75339 1184 aa6.88□□□□□ -1.31
TRAPPC13-210ENST00000509234 CYP11A1P05108 521 aa6.88□□□□□ -1.31
TRAPPC13-210ENST00000509234 CD68P34810 354 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC13-210ENST00000509234 POU4F3Q15319 338 aa6.88□□□□□ -1.31
TRAPPC13-210ENST00000509234 GATAD2BQ8WXI9 593 aa6.88□□□□□ -1.31
TRAPPC13-210ENST00000509234 PLVAPQ9BX97 442 aa6.88□□□□□ -1.31
TRAPPC13-210ENST00000509234 MKL2Q9ULH7 1088 aa6.88□□□□□ -1.31
TRAPPC13-210ENST00000509234 SUPT16HQ9Y5B9 1047 aaKnown RBP6.88□□□□□ -1.31
TRAPPC13-210ENST00000509234 IQGAP2Q13576 1575 aa6.87□□□□□ -1.31
TRAPPC13-210ENST00000509234 RAPGEF2Q9Y4G8 1499 aa6.87□□□□□ -1.31
TRAPPC13-210ENST00000509234 PTPRGP23470 1445 aa6.87□□□□□ -1.31
TRAPPC13-210ENST00000509234 ROBO2Q9HCK4 1378 aa6.87□□□□□ -1.31
TRAPPC13-210ENST00000509234 DDX3YO15523 660 aaKnown RBP6.87□□□□□ -1.31
TRAPPC13-210ENST00000509234 F13A1P00488 732 aa6.87□□□□□ -1.31
TRAPPC13-210ENST00000509234 MAOBP27338 520 aa6.87□□□□□ -1.31
TRAPPC13-210ENST00000509234 CRKP46108 304 aa6.87□□□□□ -1.31
TRAPPC13-210ENST00000509234 FAM160A1Q05DH4 1040 aa6.87□□□□□ -1.31
TRAPPC13-210ENST00000509234 KIF4BQ2VIQ3 1234 aa6.87□□□□□ -1.31
TRAPPC13-210ENST00000509234 BNC2Q6ZN30 1099 aaPredicted RBP6.87□□□□□ -1.31
TRAPPC13-210ENST00000509234 SLITRK4Q8IW52 837 aa6.87□□□□□ -1.31
TRAPPC13-210ENST00000509234 GPRASP2Q96D09 838 aa6.87□□□□□ -1.31
TRAPPC13-210ENST00000509234 CCDC86Q9H6F5 360 aaKnown RBP6.87□□□□□ -1.31
TRAPPC13-210ENST00000509234 RRAGCQ9HB90 399 aa6.87□□□□□ -1.31
TRAPPC13-210ENST00000509234 DIP2BQ9P265 1576 aa6.86□□□□□ -1.31
TRAPPC13-210ENST00000509234 DISP1Q96F81 1524 aa6.86□□□□□ -1.31
TRAPPC13-210ENST00000509234 UGGT2Q9NYU1 1516 aa6.86□□□□□ -1.31
TRAPPC13-210ENST00000509234 UHRF1BP1LA0JNW5 1464 aa6.86□□□□□ -1.31
TRAPPC13-210ENST00000509234 TNIKQ9UKE5 1360 aa6.86□□□□□ -1.31
TRAPPC13-210ENST00000509234 WISP1O95388 367 aa6.86□□□□□ -1.31
TRAPPC13-210ENST00000509234 FGRP09769 529 aa6.86□□□□□ -1.31
TRAPPC13-210ENST00000509234 ATF4P18848 351 aaPredicted RBP6.86□□□□□ -1.31
TRAPPC13-210ENST00000509234 SEPT6Q14141 434 aa6.86□□□□□ -1.31
TRAPPC13-210ENST00000509234 TRAPPC3LQ5T215 181 aa6.86□□□□□ -1.31
TRAPPC13-210ENST00000509234 GOLM1Q8NBJ4 401 aa6.86□□□□□ -1.31
TRAPPC13-210ENST00000509234 DCAF11Q8TEB1 546 aa6.86□□□□□ -1.31
TRAPPC13-210ENST00000509234 SREK1Q8WXA9 508 aaKnown RBP6.86□□□□□ -1.31
TRAPPC13-210ENST00000509234 MIR1-1HGQ9H1L0 117 aa6.86□□□□□ -1.31
TRAPPC13-210ENST00000509234 CAPN10Q9HC96 672 aa6.86□□□□□ -1.31
TRAPPC13-210ENST00000509234 CARMIL2Q6F5E8 1435 aa6.85□□□□□ -1.31
TRAPPC13-210ENST00000509234 MEGF11A6BM72 1044 aa6.85□□□□□ -1.31
TRAPPC13-210ENST00000509234 IGSF3O75054 1194 aa6.85□□□□□ -1.31
TRAPPC13-210ENST00000509234 ELNP15502 786 aa6.85□□□□□ -1.31
TRAPPC13-210ENST00000509234 COL8A1P27658 744 aa6.85□□□□□ -1.31
TRAPPC13-210ENST00000509234 SOX9P48436 509 aa6.85□□□□□ -1.31
TRAPPC13-210ENST00000509234 MPP2Q14168 576 aa6.85□□□□□ -1.31
TRAPPC13-210ENST00000509234 KIAA1211Q6ZU35 1233 aa6.85□□□□□ -1.31
TRAPPC13-210ENST00000509234 GPBAR1Q8TDU6 330 aa6.85□□□□□ -1.31
TRAPPC13-210ENST00000509234 WDR89Q96FK6 387 aaPredicted RBP6.85□□□□□ -1.31
TRAPPC13-210ENST00000509234 SPATA32Q96LK8 384 aa6.85□□□□□ -1.31
TRAPPC13-210ENST00000509234 CORO1BQ9BR76 489 aa6.85□□□□□ -1.31
TRAPPC13-210ENST00000509234 TMPRSS13Q9BYE2 586 aa6.85□□□□□ -1.31
TRAPPC13-210ENST00000509234 UBP1Q9NZI7 540 aa6.85□□□□□ -1.31
TRAPPC13-210ENST00000509234 INPP5FQ9Y2H2 1132 aa6.85□□□□□ -1.31
TRAPPC13-210ENST00000509234 SPDYE3A6NKU9 549 aa6.84□□□□□ -1.31
TRAPPC13-210ENST00000509234 GFRA2O00451 464 aa6.84□□□□□ -1.31
TRAPPC13-210ENST00000509234 PIK3R2O00459 728 aa6.84□□□□□ -1.31
TRAPPC13-210ENST00000509234 NLRP12P59046 1061 aa6.84□□□□□ -1.31
TRAPPC13-210ENST00000509234 RAC1P63000 192 aa6.84□□□□□ -1.31
TRAPPC13-210ENST00000509234 RING1Q06587 406 aa6.84□□□□□ -1.31
TRAPPC13-210ENST00000509234 SNAP47Q5SQN1 464 aa6.84□□□□□ -1.31
TRAPPC13-210ENST00000509234 MAP1SQ66K74 1059 aaPredicted RBP6.84□□□□□ -1.31
TRAPPC13-210ENST00000509234 IGF2-ASQ6U949 168 aa6.84□□□□□ -1.31
TRAPPC13-210ENST00000509234 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.84□□□□□ -1.31
TRAPPC13-210ENST00000509234 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.84□□□□□ -1.31
TRAPPC13-210ENST00000509234 TMEM130Q8N3G9 435 aa6.84□□□□□ -1.31
TRAPPC13-210ENST00000509234 FBXO27Q8NI29 283 aa6.84□□□□□ -1.31
TRAPPC13-210ENST00000509234 UBASH3BQ8TF42 649 aa6.84□□□□□ -1.31
TRAPPC13-210ENST00000509234 SEC16BQ96JE7 1060 aa6.84□□□□□ -1.31
TRAPPC13-210ENST00000509234 WDR18Q9BV38 432 aa6.84□□□□□ -1.31
TRAPPC13-210ENST00000509234 NOP53Q9NZM5 478 aaKnown RBP6.84□□□□□ -1.31
TRAPPC13-210ENST00000509234 ABCC2Q92887 1545 aa6.84□□□□□ -1.31
TRAPPC13-210ENST00000509234 PRR36Q9H6K5 1346 aa6.83□□□□□ -1.32
TRAPPC13-210ENST00000509234 KRBA1A5PL33 1030 aa6.83□□□□□ -1.32
TRAPPC13-210ENST00000509234 RPL6Q02878 288 aaKnown RBP6.83□□□□□ -1.32
TRAPPC13-210ENST00000509234 COL9A2Q14055 689 aaPredicted RBP6.83□□□□□ -1.32
TRAPPC13-210ENST00000509234 ZC3H12AQ5D1E8 599 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms