RNA–Protein interactions for RNA: ENST00000509112.1

CALCOCO2-213, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 459 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-213ENST00000509112 ECE1P42892 770 aa5.84□□□□□ -1.47
CALCOCO2-213ENST00000509112 LBX1P52954 281 aa5.84□□□□□ -1.47
CALCOCO2-213ENST00000509112 RELBQ01201 579 aa5.84□□□□□ -1.47
CALCOCO2-213ENST00000509112 CENPCQ03188 943 aa5.84□□□□□ -1.47
CALCOCO2-213ENST00000509112 TLR1Q15399 786 aa5.84□□□□□ -1.47
CALCOCO2-213ENST00000509112 OCLNQ16625 522 aa5.84□□□□□ -1.47
CALCOCO2-213ENST00000509112 NPM2Q86SE8 214 aaKnown RBP5.84□□□□□ -1.47
CALCOCO2-213ENST00000509112 CNTROBQ8N137 903 aa5.84□□□□□ -1.47
CALCOCO2-213ENST00000509112 ZNF496Q96IT1 587 aaPredicted RBP5.84□□□□□ -1.47
CALCOCO2-213ENST00000509112 HHIPL1Q96JK4 782 aa5.84□□□□□ -1.47
CALCOCO2-213ENST00000509112 VPS33BQ9H267 617 aa5.84□□□□□ -1.47
CALCOCO2-213ENST00000509112 CXXC1Q9P0U4 656 aaPredicted RBP5.84□□□□□ -1.47
CALCOCO2-213ENST00000509112 MTMR7Q9Y216 660 aa5.84□□□□□ -1.47
CALCOCO2-213ENST00000509112 GNEQ9Y223 722 aaKnown RBP5.84□□□□□ -1.47
CALCOCO2-213ENST00000509112 ZNF652Q9Y2D9 606 aa5.84□□□□□ -1.47
CALCOCO2-213ENST00000509112 KNSTRNQ9Y448 316 aa5.84□□□□□ -1.47
CALCOCO2-213ENST00000509112 LAMB4A4D0S4 1761 aa5.84□□□□□ -1.47
CALCOCO2-213ENST00000509112 IBTKQ9P2D0 1353 aaPredicted RBP5.83□□□□□ -1.48
CALCOCO2-213ENST00000509112 LTBP1Q14766 1721 aa5.83□□□□□ -1.48
CALCOCO2-213ENST00000509112 GNAT3A8MTJ3 354 aa5.83□□□□□ -1.48
CALCOCO2-213ENST00000509112 CA12O43570 354 aa5.83□□□□□ -1.48
CALCOCO2-213ENST00000509112 MAP2K2P36507 400 aa5.83□□□□□ -1.48
CALCOCO2-213ENST00000509112 IARSP41252 1262 aaKnown RBP5.83□□□□□ -1.48
CALCOCO2-213ENST00000509112 PSMA6P60900 246 aaKnown RBP5.83□□□□□ -1.48
CALCOCO2-213ENST00000509112 TEFQ10587 303 aa5.83□□□□□ -1.48
CALCOCO2-213ENST00000509112 TPTE2Q6XPS3 522 aa5.83□□□□□ -1.48
CALCOCO2-213ENST00000509112 BICDL1Q6ZP65 573 aa5.83□□□□□ -1.48
CALCOCO2-213ENST00000509112 TAS1R3Q7RTX0 852 aa5.83□□□□□ -1.48
CALCOCO2-213ENST00000509112 TSEN2Q8NCE0 465 aaKnown RBP5.83□□□□□ -1.48
CALCOCO2-213ENST00000509112 IL17REQ8NFR9 667 aa5.83□□□□□ -1.48
CALCOCO2-213ENST00000509112 RHBDD1Q8TEB9 315 aa5.83□□□□□ -1.48
CALCOCO2-213ENST00000509112 KIFC2Q96AC6 838 aa5.83□□□□□ -1.48
CALCOCO2-213ENST00000509112 ZSCAN10Q96SZ4 725 aaPredicted RBP5.83□□□□□ -1.48
CALCOCO2-213ENST00000509112 HINFPQ9BQA5 517 aa5.83□□□□□ -1.48
CALCOCO2-213ENST00000509112 SENP2Q9HC62 589 aa5.83□□□□□ -1.48
CALCOCO2-213ENST00000509112 AAASQ9NRG9 546 aa5.83□□□□□ -1.48
CALCOCO2-213ENST00000509112 CHMP3Q9Y3E7 222 aa5.83□□□□□ -1.48
CALCOCO2-213ENST00000509112 GPC6Q9Y625 555 aaPredicted RBP5.83□□□□□ -1.48
CALCOCO2-213ENST00000509112 NUP98P52948 1817 aa5.83□□□□□ -1.48
CALCOCO2-213ENST00000509112 KIF7Q2M1P5 1343 aa5.82□□□□□ -1.48
CALCOCO2-213ENST00000509112 ZNF541Q9H0D2 1346 aa5.82□□□□□ -1.48
CALCOCO2-213ENST00000509112 A1BGP04217 495 aa5.82□□□□□ -1.48
CALCOCO2-213ENST00000509112 HSPA5P11021 654 aaKnown RBP5.82□□□□□ -1.48
CALCOCO2-213ENST00000509112 BMP2P12643 396 aa5.82□□□□□ -1.48
CALCOCO2-213ENST00000509112 ATP2B4P23634 1241 aa5.82□□□□□ -1.48
CALCOCO2-213ENST00000509112 MLLT1Q03111 559 aaPredicted RBP5.82□□□□□ -1.48
CALCOCO2-213ENST00000509112 TEAD4Q15561 434 aa5.82□□□□□ -1.48
CALCOCO2-213ENST00000509112 CRY2Q49AN0 593 aa5.82□□□□□ -1.48
CALCOCO2-213ENST00000509112 USP50Q70EL3 339 aaPredicted RBP5.82□□□□□ -1.48
CALCOCO2-213ENST00000509112 ZNF295-AS1Q8N0V1 137 aa5.82□□□□□ -1.48
CALCOCO2-213ENST00000509112 AGBL1Q96MI9 1066 aa5.82□□□□□ -1.48
CALCOCO2-213ENST00000509112 DDX21Q9NR30 783 aaKnown RBP eCLIP5.82□□□□□ -1.48
CALCOCO2-213ENST00000509112 RAB6BQ9NRW1 208 aa5.82□□□□□ -1.48
CALCOCO2-213ENST00000509112 CDHR2Q9BYE9 1310 aa5.81□□□□□ -1.48
CALCOCO2-213ENST00000509112 MEN1O00255 615 aa5.81□□□□□ -1.48
CALCOCO2-213ENST00000509112 HTATSF1O43719 755 aaKnown RBP5.81□□□□□ -1.48
CALCOCO2-213ENST00000509112 HMOX1P09601 288 aa5.81□□□□□ -1.48
CALCOCO2-213ENST00000509112 SNRPA1P09661 255 aaKnown RBP5.81□□□□□ -1.48
CALCOCO2-213ENST00000509112 ARID4AP29374 1257 aaPredicted RBP5.81□□□□□ -1.48
CALCOCO2-213ENST00000509112 HOXA10P31260 410 aaPredicted RBP5.81□□□□□ -1.48
CALCOCO2-213ENST00000509112 EAPPQ56P03 285 aaPredicted RBP5.81□□□□□ -1.48
CALCOCO2-213ENST00000509112 GNASQ5JWF2 1037 aa5.81□□□□□ -1.48
CALCOCO2-213ENST00000509112 TRIM46Q7Z4K8 759 aa5.81□□□□□ -1.48
CALCOCO2-213ENST00000509112 NBPF5PQ86XG9 351 aaPredicted RBP5.81□□□□□ -1.48
CALCOCO2-213ENST00000509112 SYNE4Q8N205 404 aa5.81□□□□□ -1.48
CALCOCO2-213ENST00000509112 RNF217Q8TC41 542 aa5.81□□□□□ -1.48
CALCOCO2-213ENST00000509112 JDP2Q8WYK2 163 aa5.81□□□□□ -1.48
CALCOCO2-213ENST00000509112 INSM2Q96T92 566 aaPredicted RBP5.81□□□□□ -1.48
CALCOCO2-213ENST00000509112 C2orf49Q9BVC5 232 aaPredicted RBP5.81□□□□□ -1.48
CALCOCO2-213ENST00000509112 NIFKQ9BYG3 293 aaKnown RBP5.81□□□□□ -1.48
CALCOCO2-213ENST00000509112 NYXQ9GZU5 481 aa5.81□□□□□ -1.48
CALCOCO2-213ENST00000509112 ATP13A2Q9NQ11 1180 aa5.81□□□□□ -1.48
CALCOCO2-213ENST00000509112 ZNF277Q9NRM2 450 aaPredicted RBP5.81□□□□□ -1.48
CALCOCO2-213ENST00000509112 PGAP2Q9UHJ9 254 aa5.81□□□□□ -1.48
CALCOCO2-213ENST00000509112 RNF123Q5XPI4 1314 aa5.8□□□□□ -1.48
CALCOCO2-213ENST00000509112 TTLL8A6PVC2 850 aa5.8□□□□□ -1.48
CALCOCO2-213ENST00000509112 BTBD11A6QL63 1104 aa5.8□□□□□ -1.48
CALCOCO2-213ENST00000509112 ERVV-1B6SEH8 477 aa5.8□□□□□ -1.48
CALCOCO2-213ENST00000509112 NPHP1O15259 732 aa5.8□□□□□ -1.48
CALCOCO2-213ENST00000509112 EIF6P56537 245 aaKnown RBP5.8□□□□□ -1.48
CALCOCO2-213ENST00000509112 C1orf53Q5VUE5 145 aa5.8□□□□□ -1.48
CALCOCO2-213ENST00000509112 FOXD4L5Q5VV16 416 aaPredicted RBP5.8□□□□□ -1.48
CALCOCO2-213ENST00000509112 MAP1SQ66K74 1059 aaPredicted RBP5.8□□□□□ -1.48
CALCOCO2-213ENST00000509112 PHLDB3Q6NSJ2 640 aa5.8□□□□□ -1.48
CALCOCO2-213ENST00000509112 SLC9A9Q8IVB4 645 aa5.8□□□□□ -1.48
CALCOCO2-213ENST00000509112 CAPNS2Q96L46 248 aa5.8□□□□□ -1.48
CALCOCO2-213ENST00000509112 GPR101Q96P66 508 aaPredicted RBP5.8□□□□□ -1.48
CALCOCO2-213ENST00000509112 CRAMP1Q96RY5 1269 aa5.8□□□□□ -1.48
CALCOCO2-213ENST00000509112 POLR3GLQ9BT43 218 aa5.8□□□□□ -1.48
CALCOCO2-213ENST00000509112 TSPAN10Q9H1Z9 355 aaPredicted RBP5.8□□□□□ -1.48
CALCOCO2-213ENST00000509112 ZNF395Q9H8N7 513 aaPredicted RBP5.8□□□□□ -1.48
CALCOCO2-213ENST00000509112 ZDHHC3Q9NYG2 299 aa5.8□□□□□ -1.48
CALCOCO2-213ENST00000509112 SERTAD1Q9UHV2 236 aa5.8□□□□□ -1.48
CALCOCO2-213ENST00000509112 ABT1Q9ULW3 272 aaKnown RBP5.8□□□□□ -1.48
CALCOCO2-213ENST00000509112 USP16Q9Y5T5 823 aa5.8□□□□□ -1.48
CALCOCO2-213ENST00000509112 ANKRD36CQ5JPF3 1778 aa5.8□□□□□ -1.48
CALCOCO2-213ENST00000509112 KDM3BQ7LBC6 1761 aa5.8□□□□□ -1.48
CALCOCO2-213ENST00000509112 COL4A5P29400 1685 aa5.79□□□□□ -1.48
CALCOCO2-213ENST00000509112 CTSOP43234 321 aaPredicted RBP5.79□□□□□ -1.48
CALCOCO2-213ENST00000509112 HIF1AQ16665 826 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms