RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 CCDC84Q86UT8 332 aaPredicted RBP10.63□□□□□ -0.71
SNCA-211ENST00000508895 AACSQ86V21 672 aa10.63□□□□□ -0.71
SNCA-211ENST00000508895 DZIP1Q86YF9 867 aaKnown RBP10.63□□□□□ -0.71
SNCA-211ENST00000508895 SH3RF3Q8TEJ3 882 aaPredicted RBP10.63□□□□□ -0.71
SNCA-211ENST00000508895 OPTNQ96CV9 577 aa10.63□□□□□ -0.71
SNCA-211ENST00000508895 IDI2Q9BXS1 227 aa10.63□□□□□ -0.71
SNCA-211ENST00000508895 RPAP1Q9BWH6 1393 aaPredicted RBP10.63□□□□□ -0.71
SNCA-211ENST00000508895 PHF20L1A8MW92 1017 aa10.62□□□□□ -0.71
SNCA-211ENST00000508895 CENPBP07199 599 aaPredicted RBP10.62□□□□□ -0.71
SNCA-211ENST00000508895 UQCRFS1P1P0C7P4 283 aa10.62□□□□□ -0.71
SNCA-211ENST00000508895 IREB2P48200 963 aaKnown RBP10.62□□□□□ -0.71
SNCA-211ENST00000508895 MAP3K9P80192 1104 aa10.62□□□□□ -0.71
SNCA-211ENST00000508895 EVX2Q03828 476 aa10.62□□□□□ -0.71
SNCA-211ENST00000508895 PICALMQ13492 652 aa10.62□□□□□ -0.71
SNCA-211ENST00000508895 AAMPQ13685 434 aa10.62□□□□□ -0.71
SNCA-211ENST00000508895 SHROOM1Q2M3G4 852 aaPredicted RBP10.62□□□□□ -0.71
SNCA-211ENST00000508895 ANKRD13AQ8IZ07 590 aa10.62□□□□□ -0.71
SNCA-211ENST00000508895 BRI3BPQ8WY22 251 aa10.62□□□□□ -0.71
SNCA-211ENST00000508895 ZNF512BQ96KM6 892 aaPredicted RBP10.62□□□□□ -0.71
SNCA-211ENST00000508895 WRNIP1Q96S55 665 aa10.62□□□□□ -0.71
SNCA-211ENST00000508895 BEGAINQ9BUH8 593 aa10.62□□□□□ -0.71
SNCA-211ENST00000508895 RAI14Q9P0K7 980 aa10.62□□□□□ -0.71
SNCA-211ENST00000508895 ZNF112Q9UJU3 913 aa10.62□□□□□ -0.71
SNCA-211ENST00000508895 ATAD5Q96QE3 1844 aa10.62□□□□□ -0.71
SNCA-211ENST00000508895 MYH1P12882 1939 aa10.62□□□□□ -0.71
SNCA-211ENST00000508895 MYH8P13535 1937 aa10.62□□□□□ -0.71
SNCA-211ENST00000508895 NAV1Q8NEY1 1877 aa10.61□□□□□ -0.71
SNCA-211ENST00000508895 TNNI2P48788 182 aa10.61□□□□□ -0.71
SNCA-211ENST00000508895 JAG1P78504 1218 aa10.61□□□□□ -0.71
SNCA-211ENST00000508895 IFNL1Q8IU54 200 aa10.61□□□□□ -0.71
SNCA-211ENST00000508895 OTUD5Q96G74 571 aa10.61□□□□□ -0.71
SNCA-211ENST00000508895 MCOLN1Q9GZU1 580 aa10.61□□□□□ -0.71
SNCA-211ENST00000508895 SAGE1Q9NXZ1 904 aa10.61□□□□□ -0.71
SNCA-211ENST00000508895 TMOD2Q9NZR1 351 aa10.61□□□□□ -0.71
SNCA-211ENST00000508895 DOCK1Q14185 1865 aa10.61□□□□□ -0.71
SNCA-211ENST00000508895 DDX60LQ5H9U9 1706 aaKnown RBP10.61□□□□□ -0.71
SNCA-211ENST00000508895 TESPA1A2RU30 521 aaPredicted RBP10.6□□□□□ -0.71
SNCA-211ENST00000508895 MOGSQ13724 837 aa10.6□□□□□ -0.71
SNCA-211ENST00000508895 ERC1Q8IUD2 1116 aa10.6□□□□□ -0.71
SNCA-211ENST00000508895 FAM43AQ8N2R8 423 aa10.6□□□□□ -0.71
SNCA-211ENST00000508895 ZGPATQ8N5A5 531 aaKnown RBP10.6□□□□□ -0.71
SNCA-211ENST00000508895 ZNF296Q8WUU4 475 aaPredicted RBP10.6□□□□□ -0.71
SNCA-211ENST00000508895 AATFQ9NY61 560 aaKnown RBP eCLIP10.6□□□□□ -0.71
SNCA-211ENST00000508895 LRP2BPQ9P2M1 347 aa10.6□□□□□ -0.71
SNCA-211ENST00000508895 BAZ2AQ9UIF9 1905 aaKnown RBP10.6□□□□□ -0.71
SNCA-211ENST00000508895 SPDYE5A6NIY4 337 aa10.59□□□□□ -0.71
SNCA-211ENST00000508895 IRF6O14896 467 aa10.59□□□□□ -0.71
SNCA-211ENST00000508895 CA12O43570 354 aa10.59□□□□□ -0.71
SNCA-211ENST00000508895 ENTPD3O75355 529 aa10.59□□□□□ -0.71
SNCA-211ENST00000508895 ZBTB48P10074 688 aaPredicted RBP10.59□□□□□ -0.71
SNCA-211ENST00000508895 MAP3K10Q02779 954 aa10.59□□□□□ -0.71
SNCA-211ENST00000508895 HDAC1Q13547 482 aaPredicted RBP10.59□□□□□ -0.71
SNCA-211ENST00000508895 SLC4A8Q2Y0W8 1093 aa10.59□□□□□ -0.71
SNCA-211ENST00000508895 HSP90AB4PQ58FF6 505 aa10.59□□□□□ -0.71
SNCA-211ENST00000508895 CCDC158Q5M9N0 1113 aa10.59□□□□□ -0.71
SNCA-211ENST00000508895 TSHZ3Q63HK5 1081 aa10.59□□□□□ -0.71
SNCA-211ENST00000508895 SPTY2D1Q68D10 685 aaPredicted RBP10.59□□□□□ -0.71
SNCA-211ENST00000508895 MIGA1Q8NAN2 632 aa10.59□□□□□ -0.71
SNCA-211ENST00000508895 OTUD7AQ8TE49 926 aaPredicted RBP10.59□□□□□ -0.71
SNCA-211ENST00000508895 ZNF341Q9BYN7 854 aa10.59□□□□□ -0.71
SNCA-211ENST00000508895 DCTPP1Q9H773 170 aa10.59□□□□□ -0.71
SNCA-211ENST00000508895 DNAJC18Q9H819 358 aa10.59□□□□□ -0.71
SNCA-211ENST00000508895 MANSC4A6NHS7 340 aaPredicted RBP10.58□□□□□ -0.72
SNCA-211ENST00000508895 SMIM22K7EJ46 135 aa10.58□□□□□ -0.72
SNCA-211ENST00000508895 GPR25O00155 361 aa10.58□□□□□ -0.72
SNCA-211ENST00000508895 CYP7A1P22680 504 aa10.58□□□□□ -0.72
SNCA-211ENST00000508895 CRHR2Q13324 411 aa10.58□□□□□ -0.72
SNCA-211ENST00000508895 DGKZQ13574 1117 aa10.58□□□□□ -0.72
SNCA-211ENST00000508895 NAA16Q6N069 864 aaPredicted RBP10.58□□□□□ -0.72
SNCA-211ENST00000508895 MAPKAPK5Q8IW41 473 aa10.58□□□□□ -0.72
SNCA-211ENST00000508895 TEX11Q8IYF3 940 aa10.58□□□□□ -0.72
SNCA-211ENST00000508895 KIF1BPQ96EK5 621 aa10.58□□□□□ -0.72
SNCA-211ENST00000508895 OSBPL5Q9H0X9 879 aaPredicted RBP10.58□□□□□ -0.72
SNCA-211ENST00000508895 DOCK3Q8IZD9 2030 aa10.58□□□□□ -0.72
SNCA-211ENST00000508895 CCL15-CCL14A0A0B4J2E2 113 aa10.57□□□□□ -0.72
SNCA-211ENST00000508895 TCRBV5S4A2TA0A5A2 114 aa10.57□□□□□ -0.72
SNCA-211ENST00000508895 BTBD19C9JJ37 291 aa10.57□□□□□ -0.72
SNCA-211ENST00000508895 RAB11FIP3O75154 756 aa10.57□□□□□ -0.72
SNCA-211ENST00000508895 IDH1O75874 414 aaKnown RBP10.57□□□□□ -0.72
SNCA-211ENST00000508895 PPP4CP60510 307 aa10.57□□□□□ -0.72
SNCA-211ENST00000508895 CCL15Q16663 113 aa10.57□□□□□ -0.72
SNCA-211ENST00000508895 MAGEB6Q8N7X4 407 aa10.57□□□□□ -0.72
SNCA-211ENST00000508895 TGFBRAP1Q8WUH2 860 aa10.57□□□□□ -0.72
SNCA-211ENST00000508895 CFHR5Q9BXR6 569 aa10.57□□□□□ -0.72
SNCA-211ENST00000508895 BOLA2Q9H3K6 86 aa10.57□□□□□ -0.72
SNCA-211ENST00000508895 SAP30BPQ9UHR5 308 aaKnown RBP10.57□□□□□ -0.72
SNCA-211ENST00000508895 HTTP42858 3142 aa10.56□□□□□ -0.72
SNCA-211ENST00000508895 UNCXA6NJT0 531 aa10.56□□□□□ -0.72
SNCA-211ENST00000508895 GOLIM4O00461 696 aa10.56□□□□□ -0.72
SNCA-211ENST00000508895 IGHDP01880 384 aa10.56□□□□□ -0.72
SNCA-211ENST00000508895 CTGFP29279 349 aa10.56□□□□□ -0.72
SNCA-211ENST00000508895 SREBF2Q12772 1141 aa10.56□□□□□ -0.72
SNCA-211ENST00000508895 PPIL2Q13356 520 aa10.56□□□□□ -0.72
SNCA-211ENST00000508895 NOL9Q5SY16 702 aaKnown RBP10.56□□□□□ -0.72
SNCA-211ENST00000508895 DCAF15Q66K64 600 aa10.56□□□□□ -0.72
SNCA-211ENST00000508895 GPAT2Q6NUI2 795 aa10.56□□□□□ -0.72
SNCA-211ENST00000508895 ERO1BQ86YB8 467 aa10.56□□□□□ -0.72
SNCA-211ENST00000508895 ZSCAN29Q8IWY8 852 aaPredicted RBP10.56□□□□□ -0.72
SNCA-211ENST00000508895 DNAJC2Q99543 621 aaKnown RBP10.56□□□□□ -0.72
SNCA-211ENST00000508895 RIOK1Q9BRS2 568 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms