RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 FASTKD5Q7L8L6 764 aaKnown RBP16.72■□□□□ 0.27
CCHCR1-227ENST00000508852 SSH3Q8TE77 659 aa16.72■□□□□ 0.27
CCHCR1-227ENST00000508852 ARMC5Q96C12 935 aa16.72■□□□□ 0.27
CCHCR1-227ENST00000508852 HMG20BQ9P0W2 317 aa16.72■□□□□ 0.27
CCHCR1-227ENST00000508852 RBBP6Q7Z6E9 1792 aaKnown RBP16.72■□□□□ 0.27
CCHCR1-227ENST00000508852 PNMA6EA0A0J9YXQ4 647 aa16.71■□□□□ 0.27
CCHCR1-227ENST00000508852 TBC1D12O60347 775 aa16.71■□□□□ 0.27
CCHCR1-227ENST00000508852 CTNND1O60716 968 aaKnown RBP16.71■□□□□ 0.27
CCHCR1-227ENST00000508852 PLCG2P16885 1265 aa16.71■□□□□ 0.27
CCHCR1-227ENST00000508852 MECOMQ03112 1051 aa16.71■□□□□ 0.27
CCHCR1-227ENST00000508852 POLA2Q14181 598 aa16.71■□□□□ 0.27
CCHCR1-227ENST00000508852 SCYL3Q8IZE3 742 aa16.71■□□□□ 0.27
CCHCR1-227ENST00000508852 TBC1D2Q9BYX2 928 aa16.71■□□□□ 0.27
CCHCR1-227ENST00000508852 TNRC18O15417 2968 aaPredicted RBP16.71■□□□□ 0.26
CCHCR1-227ENST00000508852 ZBED9Q6R2W3 1325 aa16.7■□□□□ 0.26
CCHCR1-227ENST00000508852 COL2A1P02458 1487 aaPredicted RBP16.7■□□□□ 0.26
CCHCR1-227ENST00000508852 RFX7Q2KHR2 1363 aa16.7■□□□□ 0.26
CCHCR1-227ENST00000508852 BAG3O95817 575 aa16.7■□□□□ 0.26
CCHCR1-227ENST00000508852 HOXD10P28358 340 aa16.7■□□□□ 0.26
CCHCR1-227ENST00000508852 TMED8Q6PL24 325 aaPredicted RBP16.7■□□□□ 0.26
CCHCR1-227ENST00000508852 ITPRIPQ8IWB1 547 aa16.7■□□□□ 0.26
CCHCR1-227ENST00000508852 MIER1Q8N108 512 aa16.7■□□□□ 0.26
CCHCR1-227ENST00000508852 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.7■□□□□ 0.26
CCHCR1-227ENST00000508852 NSUN4Q96CB9 384 aaKnown RBP16.7■□□□□ 0.26
CCHCR1-227ENST00000508852 ZNF512BQ96KM6 892 aaPredicted RBP16.7■□□□□ 0.26
CCHCR1-227ENST00000508852 RAI14Q9P0K7 980 aa16.7■□□□□ 0.26
CCHCR1-227ENST00000508852 LRP2BPQ9P2M1 347 aa16.7■□□□□ 0.26
CCHCR1-227ENST00000508852 ATRNL1Q5VV63 1379 aa16.69■□□□□ 0.26
CCHCR1-227ENST00000508852 PHF20L1A8MW92 1017 aa16.69■□□□□ 0.26
CCHCR1-227ENST00000508852 LACTBP83111 547 aaPredicted RBP16.69■□□□□ 0.26
CCHCR1-227ENST00000508852 TTC39AQ5SRH9 613 aa16.69■□□□□ 0.26
CCHCR1-227ENST00000508852 PARK7Q99497 189 aaKnown RBP16.69■□□□□ 0.26
CCHCR1-227ENST00000508852 TMEM106CQ9BVX2 250 aa16.69■□□□□ 0.26
CCHCR1-227ENST00000508852 SLC45A1Q9Y2W3 748 aa16.69■□□□□ 0.26
CCHCR1-227ENST00000508852 NOP58Q9Y2X3 529 aaKnown RBP16.69■□□□□ 0.26
CCHCR1-227ENST00000508852 PDHXO00330 501 aa16.68■□□□□ 0.26
CCHCR1-227ENST00000508852 SURF6O75683 361 aaKnown RBP16.68■□□□□ 0.26
CCHCR1-227ENST00000508852 PICALMQ13492 652 aa16.68■□□□□ 0.26
CCHCR1-227ENST00000508852 SLC9C1Q4G0N8 1177 aa16.68■□□□□ 0.26
CCHCR1-227ENST00000508852 TNNI3KQ59H18 835 aa16.68■□□□□ 0.26
CCHCR1-227ENST00000508852 PRPF38BQ5VTL8 546 aaKnown RBP16.68■□□□□ 0.26
CCHCR1-227ENST00000508852 C17orf99Q6UX52 265 aa16.68■□□□□ 0.26
CCHCR1-227ENST00000508852 CERS3Q8IU89 383 aa16.68■□□□□ 0.26
CCHCR1-227ENST00000508852 ERC1Q8IUD2 1116 aa16.68■□□□□ 0.26
CCHCR1-227ENST00000508852 FPGT-TNNI3KV9GXZ4 949 aa16.68■□□□□ 0.26
CCHCR1-227ENST00000508852 DOCK1Q14185 1865 aa16.67■□□□□ 0.26
CCHCR1-227ENST00000508852 ZBTB7BO15156 539 aaPredicted RBP16.67■□□□□ 0.26
CCHCR1-227ENST00000508852 PTPRAP18433 802 aa16.67■□□□□ 0.26
CCHCR1-227ENST00000508852 MCAMP43121 646 aa16.67■□□□□ 0.26
CCHCR1-227ENST00000508852 RHBDL3P58872 404 aa16.67■□□□□ 0.26
CCHCR1-227ENST00000508852 HSP90AB4PQ58FF6 505 aa16.67■□□□□ 0.26
CCHCR1-227ENST00000508852 ZFPM1Q8IX07 1006 aa16.67■□□□□ 0.26
CCHCR1-227ENST00000508852 OSBPL5Q9H0X9 879 aaPredicted RBP16.67■□□□□ 0.26
CCHCR1-227ENST00000508852 DHX36Q9H2U1 1008 aaKnown RBP16.67■□□□□ 0.26
CCHCR1-227ENST00000508852 CHMP4BQ9H444 224 aaKnown RBP16.67■□□□□ 0.26
CCHCR1-227ENST00000508852 TNNQ9UQP3 1299 aa16.67■□□□□ 0.26
CCHCR1-227ENST00000508852 ZHX2Q9Y6X8 837 aa16.67■□□□□ 0.26
CCHCR1-227ENST00000508852 MAST2Q6P0Q8 1798 aa16.66■□□□□ 0.26
CCHCR1-227ENST00000508852 A0A0G2JLL6 359 aaPredicted RBP16.66■□□□□ 0.26
CCHCR1-227ENST00000508852 NAA16Q6N069 864 aaPredicted RBP16.66■□□□□ 0.26
CCHCR1-227ENST00000508852 PRRT2Q7Z6L0 340 aaPredicted RBP16.66■□□□□ 0.26
CCHCR1-227ENST00000508852 HERC5Q9UII4 1024 aaKnown RBP16.66■□□□□ 0.26
CCHCR1-227ENST00000508852 AFG3L2Q9Y4W6 797 aa16.66■□□□□ 0.26
CCHCR1-227ENST00000508852 DDTLA6NHG4 134 aaPredicted RBP16.65■□□□□ 0.26
CCHCR1-227ENST00000508852 SH3BP5LQ7L8J4 393 aa16.65■□□□□ 0.26
CCHCR1-227ENST00000508852 TEX11Q8IYF3 940 aa16.65■□□□□ 0.26
CCHCR1-227ENST00000508852 ZNF333Q96JL9 665 aa16.65■□□□□ 0.26
CCHCR1-227ENST00000508852 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.65■□□□□ 0.26
CCHCR1-227ENST00000508852 DDX4Q9NQI0 724 aaKnown RBP16.65■□□□□ 0.26
CCHCR1-227ENST00000508852 PPP4CP60510 307 aa16.64■□□□□ 0.25
CCHCR1-227ENST00000508852 TBC1D9Q6ZT07 1266 aa16.64■□□□□ 0.25
CCHCR1-227ENST00000508852 GINM1Q9NU53 330 aa16.64■□□□□ 0.25
CCHCR1-227ENST00000508852 PI4KBQ9UBF8 816 aa16.64■□□□□ 0.25
CCHCR1-227ENST00000508852 PNMA3Q9UL41 463 aa16.64■□□□□ 0.25
CCHCR1-227ENST00000508852 PTCH2Q9Y6C5 1203 aa16.64■□□□□ 0.25
CCHCR1-227ENST00000508852 FMNL1O95466 1100 aaPredicted RBP16.63■□□□□ 0.25
CCHCR1-227ENST00000508852 PABPC4Q13310 644 aaKnown RBP eCLIP16.63■□□□□ 0.25
CCHCR1-227ENST00000508852 MOGSQ13724 837 aa16.63■□□□□ 0.25
CCHCR1-227ENST00000508852 PROCA1Q8NCQ7 364 aaPredicted RBP16.63■□□□□ 0.25
CCHCR1-227ENST00000508852 ZNF384Q8TF68 577 aa16.63■□□□□ 0.25
CCHCR1-227ENST00000508852 GCC1Q96CN9 775 aa16.63■□□□□ 0.25
CCHCR1-227ENST00000508852 DBNDD2Q9BQY9 259 aa16.63■□□□□ 0.25
CCHCR1-227ENST00000508852 AS3MTQ9HBK9 375 aa16.63■□□□□ 0.25
CCHCR1-227ENST00000508852 SRRDQ9UH36 339 aa16.63■□□□□ 0.25
CCHCR1-227ENST00000508852 CPA4Q9UI42 421 aa16.63■□□□□ 0.25
CCHCR1-227ENST00000508852 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.63■□□□□ 0.25
CCHCR1-227ENST00000508852 PTPRFP10586 1907 aa16.62■□□□□ 0.25
CCHCR1-227ENST00000508852 KIAA0100Q14667 2235 aaKnown RBP16.62■□□□□ 0.25
CCHCR1-227ENST00000508852 PHIPQ8WWQ0 1821 aa16.62■□□□□ 0.25
CCHCR1-227ENST00000508852 CAPN2P17655 700 aa16.62■□□□□ 0.25
CCHCR1-227ENST00000508852 PSMC4P43686 418 aa16.62■□□□□ 0.25
CCHCR1-227ENST00000508852 FCGRTP55899 365 aa16.62■□□□□ 0.25
CCHCR1-227ENST00000508852 SLC4A8Q2Y0W8 1093 aa16.62■□□□□ 0.25
CCHCR1-227ENST00000508852 GPAT2Q6NUI2 795 aa16.62■□□□□ 0.25
CCHCR1-227ENST00000508852 PI16Q6UXB8 463 aa16.62■□□□□ 0.25
CCHCR1-227ENST00000508852 GADL1Q6ZQY3 521 aa16.62■□□□□ 0.25
CCHCR1-227ENST00000508852 TRIM34Q9BYJ4 488 aa16.62■□□□□ 0.25
CCHCR1-227ENST00000508852 ADGRA2Q96PE1 1338 aa16.62■□□□□ 0.25
CCHCR1-227ENST00000508852 HTTP42858 3142 aa16.62■□□□□ 0.25
CCHCR1-227ENST00000508852 HMMRO75330 724 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms