RNA–Protein interactions for RNA: ENST00000508828.1

SPSB4-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

TSL 3

Gene SPSB4, Length 537 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-204ENST00000508828 TGFB2P61812 414 aa15.55■□□□□ 0.08
SPSB4-204ENST00000508828 PKP1Q13835 747 aa15.55■□□□□ 0.08
SPSB4-204ENST00000508828 RRP12Q5JTH9 1297 aaKnown RBP15.55■□□□□ 0.08
SPSB4-204ENST00000508828 SOGA3Q5TF21 947 aa15.55■□□□□ 0.08
SPSB4-204ENST00000508828 CYB5R4Q7L1T6 521 aa15.55■□□□□ 0.08
SPSB4-204ENST00000508828 RTKN2Q8IZC4 609 aa15.55■□□□□ 0.08
SPSB4-204ENST00000508828 ESR2Q92731 530 aa15.55■□□□□ 0.08
SPSB4-204ENST00000508828 KIF3AQ9Y496 699 aa15.55■□□□□ 0.08
SPSB4-204ENST00000508828 ERICH2A1L162 156 aa15.54■□□□□ 0.08
SPSB4-204ENST00000508828 GOLGA8BA8MQT2 603 aa15.54■□□□□ 0.08
SPSB4-204ENST00000508828 STX6O43752 255 aa15.54■□□□□ 0.08
SPSB4-204ENST00000508828 C21orf2O43822 256 aa15.54■□□□□ 0.08
SPSB4-204ENST00000508828 ECE2O60344 883 aa15.54■□□□□ 0.08
SPSB4-204ENST00000508828 KDM4AO75164 1064 aa15.54■□□□□ 0.08
SPSB4-204ENST00000508828 BAG4O95429 457 aaKnown RBP15.54■□□□□ 0.08
SPSB4-204ENST00000508828 PDIA3P30101 505 aaKnown RBP15.54■□□□□ 0.08
SPSB4-204ENST00000508828 HMGN5P82970 282 aaKnown RBP15.54■□□□□ 0.08
SPSB4-204ENST00000508828 KIAA2012Q0VF49 1180 aa15.54■□□□□ 0.08
SPSB4-204ENST00000508828 SCRN1Q12765 414 aa15.54■□□□□ 0.08
SPSB4-204ENST00000508828 TMEM67Q5HYA8 995 aa15.54■□□□□ 0.08
SPSB4-204ENST00000508828 CTR9Q6PD62 1173 aa15.54■□□□□ 0.08
SPSB4-204ENST00000508828 SH3RF3Q8TEJ3 882 aaPredicted RBP15.54■□□□□ 0.08
SPSB4-204ENST00000508828 DBNDD1Q9H9R9 158 aa15.54■□□□□ 0.08
SPSB4-204ENST00000508828 ZDHHC9Q9Y397 364 aa15.54■□□□□ 0.08
SPSB4-204ENST00000508828 USP17L12C9JPN9 530 aa15.53■□□□□ 0.08
SPSB4-204ENST00000508828 USP17L21D6R901 530 aa15.53■□□□□ 0.08
SPSB4-204ENST00000508828 IFIT3O14879 490 aaKnown RBP15.53■□□□□ 0.08
SPSB4-204ENST00000508828 DHX16O60231 1041 aaKnown RBP15.53■□□□□ 0.08
SPSB4-204ENST00000508828 SYT1P21579 422 aa15.53■□□□□ 0.08
SPSB4-204ENST00000508828 LIFRP42702 1097 aa15.53■□□□□ 0.08
SPSB4-204ENST00000508828 STRIP1Q5VSL9 837 aa15.53■□□□□ 0.08
SPSB4-204ENST00000508828 TEX11Q8IYF3 940 aa15.53■□□□□ 0.08
SPSB4-204ENST00000508828 MCM9Q9NXL9 1143 aa15.53■□□□□ 0.08
SPSB4-204ENST00000508828 TTF2Q9UNY4 1162 aaKnown RBP15.53■□□□□ 0.08
SPSB4-204ENST00000508828 ATF5Q9Y2D1 282 aaPredicted RBP15.53■□□□□ 0.08
SPSB4-204ENST00000508828 PPIP5K2O43314 1243 aa15.52■□□□□ 0.08
SPSB4-204ENST00000508828 ORC4O43929 436 aa15.52■□□□□ 0.08
SPSB4-204ENST00000508828 ZSCAN22P10073 491 aaPredicted RBP15.52■□□□□ 0.08
SPSB4-204ENST00000508828 PDE4BQ07343 736 aa15.52■□□□□ 0.08
SPSB4-204ENST00000508828 AOC3Q16853 763 aa15.52■□□□□ 0.08
SPSB4-204ENST00000508828 NFXL1Q6ZNB6 911 aa15.52■□□□□ 0.08
SPSB4-204ENST00000508828 FAM184AQ8NB25 1140 aa15.52■□□□□ 0.08
SPSB4-204ENST00000508828 SMARCC2Q8TAQ2 1214 aa15.52■□□□□ 0.08
SPSB4-204ENST00000508828 PSMD1Q99460 953 aa15.52■□□□□ 0.08
SPSB4-204ENST00000508828 UBAC1Q9BSL1 405 aa15.52■□□□□ 0.08
SPSB4-204ENST00000508828 GPHNQ9NQX3 736 aaPredicted RBP15.52■□□□□ 0.08
SPSB4-204ENST00000508828 ZSWIM5Q9P217 1185 aa15.52■□□□□ 0.08
SPSB4-204ENST00000508828 DAGLAQ9Y4D2 1042 aa15.52■□□□□ 0.08
SPSB4-204ENST00000508828 TACC3Q9Y6A5 838 aa15.52■□□□□ 0.08
SPSB4-204ENST00000508828 CDK5RAP2Q96SN8 1893 aa15.52■□□□□ 0.07
SPSB4-204ENST00000508828 DDX60LQ5H9U9 1706 aaKnown RBP15.51■□□□□ 0.07
SPSB4-204ENST00000508828 ROBO3Q96MS0 1386 aa15.51■□□□□ 0.07
SPSB4-204ENST00000508828 CYP2D7A0A087X1C5 515 aa15.51■□□□□ 0.07
SPSB4-204ENST00000508828 USP17L3A6NCW0 530 aa15.51■□□□□ 0.07
SPSB4-204ENST00000508828 USP17L4A6NCW7 530 aa15.51■□□□□ 0.07
SPSB4-204ENST00000508828 CCDC69A6NI79 296 aa15.51■□□□□ 0.07
SPSB4-204ENST00000508828 FGRP09769 529 aa15.51■□□□□ 0.07
SPSB4-204ENST00000508828 CCT2P78371 535 aaKnown RBP15.51■□□□□ 0.07
SPSB4-204ENST00000508828 WTAPQ15007 396 aa15.51■□□□□ 0.07
SPSB4-204ENST00000508828 LARP1BQ659C4 914 aaKnown RBP15.51■□□□□ 0.07
SPSB4-204ENST00000508828 CPLX2Q6PUV4 134 aaKnown RBP15.51■□□□□ 0.07
SPSB4-204ENST00000508828 SYNE3Q6ZMZ3 975 aa15.51■□□□□ 0.07
SPSB4-204ENST00000508828 USP17L1Q7RTZ2 530 aa15.51■□□□□ 0.07
SPSB4-204ENST00000508828 SGMS1Q86VZ5 419 aa15.51■□□□□ 0.07
SPSB4-204ENST00000508828 STK11IPQ8N1F8 1099 aa15.51■□□□□ 0.07
SPSB4-204ENST00000508828 TMTC2Q8N394 836 aa15.51■□□□□ 0.07
SPSB4-204ENST00000508828 CERS5Q8N5B7 392 aa15.51■□□□□ 0.07
SPSB4-204ENST00000508828 NSUN7Q8NE18 718 aaKnown RBP15.51■□□□□ 0.07
SPSB4-204ENST00000508828 IGDCC4Q8TDY8 1250 aa15.51■□□□□ 0.07
SPSB4-204ENST00000508828 TGFBRAP1Q8WUH2 860 aa15.51■□□□□ 0.07
SPSB4-204ENST00000508828 VPS33BQ9H267 617 aa15.51■□□□□ 0.07
SPSB4-204ENST00000508828 LY9Q9HBG7 655 aa15.51■□□□□ 0.07
SPSB4-204ENST00000508828 INCENPQ9NQS7 918 aa15.51■□□□□ 0.07
SPSB4-204ENST00000508828 PIM2Q9P1W9 311 aa15.51■□□□□ 0.07
SPSB4-204ENST00000508828 BRPF3Q9ULD4 1205 aa15.51■□□□□ 0.07
SPSB4-204ENST00000508828 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.51■□□□□ 0.07
SPSB4-204ENST00000508828 ATP6V1DQ9Y5K8 247 aa15.51■□□□□ 0.07
SPSB4-204ENST00000508828 ZNF646O15015 1829 aaPredicted RBP15.5■□□□□ 0.07
SPSB4-204ENST00000508828 PSME4Q14997 1843 aa15.5■□□□□ 0.07
SPSB4-204ENST00000508828 FOCADQ5VW36 1801 aa15.5■□□□□ 0.07
SPSB4-204ENST00000508828 PTPDC1A2A3K4 754 aa15.5■□□□□ 0.07
SPSB4-204ENST00000508828 VPS37CA5D8V6 355 aaPredicted RBP15.5■□□□□ 0.07
SPSB4-204ENST00000508828 F8W031 263 aaPredicted RBP15.5■□□□□ 0.07
SPSB4-204ENST00000508828 JAK2O60674 1132 aa15.5■□□□□ 0.07
SPSB4-204ENST00000508828 KCNA3P22001 575 aa15.5■□□□□ 0.07
SPSB4-204ENST00000508828 C12orf60Q5U649 245 aa15.5■□□□□ 0.07
SPSB4-204ENST00000508828 FOXD4L5Q5VV16 416 aaPredicted RBP15.5■□□□□ 0.07
SPSB4-204ENST00000508828 HHIPL2Q6UWX4 724 aa15.5■□□□□ 0.07
SPSB4-204ENST00000508828 MAPKAPK5Q8IW41 473 aa15.5■□□□□ 0.07
SPSB4-204ENST00000508828 FOXD4L4Q8WXT5 416 aaPredicted RBP15.5■□□□□ 0.07
SPSB4-204ENST00000508828 TEKT1Q969V4 418 aa15.5■□□□□ 0.07
SPSB4-204ENST00000508828 MKRN1Q9UHC7 482 aaKnown RBP15.5■□□□□ 0.07
SPSB4-204ENST00000508828 MTMR6Q9Y217 621 aa15.5■□□□□ 0.07
SPSB4-204ENST00000508828 CPLX1O14810 134 aa15.49■□□□□ 0.07
SPSB4-204ENST00000508828 ZBTB43O43298 467 aa15.49■□□□□ 0.07
SPSB4-204ENST00000508828 CDKL5O76039 1030 aa15.49■□□□□ 0.07
SPSB4-204ENST00000508828 F13A1P00488 732 aa15.49■□□□□ 0.07
SPSB4-204ENST00000508828 POLR3DP05423 398 aaPredicted RBP15.49■□□□□ 0.07
SPSB4-204ENST00000508828 USP17L8P0C7I0 530 aa15.49■□□□□ 0.07
SPSB4-204ENST00000508828 CYP2D6P10635 497 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms