RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 MCAMP43121 646 aa15.42■□□□□ 0.06
SNCAIP-209ENST00000508017 HNRNPH2P55795 449 aaKnown RBP15.42■□□□□ 0.06
SNCAIP-209ENST00000508017 ST5P78524 1137 aa15.42■□□□□ 0.06
SNCAIP-209ENST00000508017 MAP3K9P80192 1104 aa15.42■□□□□ 0.06
SNCAIP-209ENST00000508017 MDM2Q00987 491 aaPredicted RBP15.42■□□□□ 0.06
SNCAIP-209ENST00000508017 NTRK3Q16288 839 aa15.42■□□□□ 0.06
SNCAIP-209ENST00000508017 CC2D1AQ6P1N0 951 aaPredicted RBP15.42■□□□□ 0.06
SNCAIP-209ENST00000508017 CREBRFQ8IUR6 639 aa15.42■□□□□ 0.06
SNCAIP-209ENST00000508017 MPHOSPH8Q99549 860 aa15.42■□□□□ 0.06
SNCAIP-209ENST00000508017 MAN1B1Q9UKM7 699 aa15.42■□□□□ 0.06
SNCAIP-209ENST00000508017 AKAP2Q9Y2D5 859 aa15.42■□□□□ 0.06
SNCAIP-209ENST00000508017 UBN2Q6ZU65 1347 aa15.41■□□□□ 0.06
SNCAIP-209ENST00000508017 PPP2R3AQ06190 1150 aa15.41■□□□□ 0.06
SNCAIP-209ENST00000508017 GRAMD1CQ8IYS0 662 aa15.41■□□□□ 0.06
SNCAIP-209ENST00000508017 NEK11Q8NG66 645 aa15.41■□□□□ 0.06
SNCAIP-209ENST00000508017 KIFC2Q96AC6 838 aa15.41■□□□□ 0.06
SNCAIP-209ENST00000508017 CCDC34Q96HJ3 373 aa15.41■□□□□ 0.06
SNCAIP-209ENST00000508017 FAM217BQ9NTX9 383 aaPredicted RBP15.41■□□□□ 0.06
SNCAIP-209ENST00000508017 CALCOCO1Q9P1Z2 691 aa15.41■□□□□ 0.06
SNCAIP-209ENST00000508017 CDKL5O76039 1030 aa15.41■□□□□ 0.06
SNCAIP-209ENST00000508017 APPP05067 770 aa15.41■□□□□ 0.06
SNCAIP-209ENST00000508017 KARSQ15046 597 aaKnown RBP15.41■□□□□ 0.06
SNCAIP-209ENST00000508017 STK11IPQ8N1F8 1099 aa15.41■□□□□ 0.06
SNCAIP-209ENST00000508017 TRERF1Q96PN7 1200 aa15.41■□□□□ 0.06
SNCAIP-209ENST00000508017 UBXN6Q9BZV1 441 aa15.41■□□□□ 0.06
SNCAIP-209ENST00000508017 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.41■□□□□ 0.06
SNCAIP-209ENST00000508017 NFE2L3Q9Y4A8 694 aa15.41■□□□□ 0.06
SNCAIP-209ENST00000508017 MRFAP1Q9Y605 127 aa15.41■□□□□ 0.06
SNCAIP-209ENST00000508017 C1orf167Q5SNV9 1468 aa15.4■□□□□ 0.06
SNCAIP-209ENST00000508017 ZBTB43O43298 467 aa15.4■□□□□ 0.06
SNCAIP-209ENST00000508017 OAS2P29728 719 aaKnown RBP15.4■□□□□ 0.06
SNCAIP-209ENST00000508017 IARSP41252 1262 aaKnown RBP15.4■□□□□ 0.06
SNCAIP-209ENST00000508017 MTF1Q14872 753 aa15.4■□□□□ 0.06
SNCAIP-209ENST00000508017 SLC9C2Q5TAH2 1124 aa15.4■□□□□ 0.06
SNCAIP-209ENST00000508017 FAM89AQ96GI7 184 aa15.4■□□□□ 0.06
SNCAIP-209ENST00000508017 MED15Q96RN5 788 aa15.4■□□□□ 0.06
SNCAIP-209ENST00000508017 ZNF330Q9Y3S2 320 aaPredicted RBP15.4■□□□□ 0.06
SNCAIP-209ENST00000508017 RIC1Q4ADV7 1423 aa15.4■□□□□ 0.06
SNCAIP-209ENST00000508017 GOLGA8AA7E2F4 631 aa15.39■□□□□ 0.05
SNCAIP-209ENST00000508017 ADD2P35612 726 aa15.39■□□□□ 0.05
SNCAIP-209ENST00000508017 TAF7LQ5H9L4 462 aa15.39■□□□□ 0.05
SNCAIP-209ENST00000508017 NFXL1Q6ZNB6 911 aa15.39■□□□□ 0.05
SNCAIP-209ENST00000508017 RSRC2Q7L4I2 434 aaKnown RBP15.39■□□□□ 0.05
SNCAIP-209ENST00000508017 DHX58Q96C10 678 aa15.39■□□□□ 0.05
SNCAIP-209ENST00000508017 SLC26A6Q9BXS9 759 aa15.39■□□□□ 0.05
SNCAIP-209ENST00000508017 IRX2Q9BZI1 471 aaPredicted RBP15.39■□□□□ 0.05
SNCAIP-209ENST00000508017 ADAMTSL3P82987 1691 aa15.39■□□□□ 0.05
SNCAIP-209ENST00000508017 TPM1P09493 284 aa15.39■□□□□ 0.05
SNCAIP-209ENST00000508017 ZNF18P17022 549 aa15.39■□□□□ 0.05
SNCAIP-209ENST00000508017 GUCY1A2P33402 732 aa15.39■□□□□ 0.05
SNCAIP-209ENST00000508017 TOB1P50616 345 aaPredicted RBP15.39■□□□□ 0.05
SNCAIP-209ENST00000508017 TRIM29Q14134 588 aa15.39■□□□□ 0.05
SNCAIP-209ENST00000508017 POSTNQ15063 836 aa15.39■□□□□ 0.05
SNCAIP-209ENST00000508017 SPECC1LQ69YQ0 1117 aa15.39■□□□□ 0.05
SNCAIP-209ENST00000508017 SYNE4Q8N205 404 aa15.39■□□□□ 0.05
SNCAIP-209ENST00000508017 KRI1Q8N9T8 703 aaKnown RBP15.39■□□□□ 0.05
SNCAIP-209ENST00000508017 IGDCC4Q8TDY8 1250 aa15.39■□□□□ 0.05
SNCAIP-209ENST00000508017 SMARCE1Q969G3 411 aa15.39■□□□□ 0.05
SNCAIP-209ENST00000508017 MRPL44Q9H9J2 332 aaKnown RBP15.39■□□□□ 0.05
SNCAIP-209ENST00000508017 LY9Q9HBG7 655 aa15.39■□□□□ 0.05
SNCAIP-209ENST00000508017 PIH1D3Q9NQM4 214 aaKnown RBP15.39■□□□□ 0.05
SNCAIP-209ENST00000508017 SEC31BQ9NQW1 1179 aa15.39■□□□□ 0.05
SNCAIP-209ENST00000508017 SERTAD1Q9UHV2 236 aa15.39■□□□□ 0.05
SNCAIP-209ENST00000508017 UBR2Q8IWV8 1755 aa15.39■□□□□ 0.05
SNCAIP-209ENST00000508017 BTBD18B2RXH4 712 aa15.38■□□□□ 0.05
SNCAIP-209ENST00000508017 MYO1BO43795 1136 aa15.38■□□□□ 0.05
SNCAIP-209ENST00000508017 CDK11BP21127 795 aaKnown RBP15.38■□□□□ 0.05
SNCAIP-209ENST00000508017 CPLX2Q6PUV4 134 aaKnown RBP15.38■□□□□ 0.05
SNCAIP-209ENST00000508017 GPR161Q8N6U8 529 aaKnown RBP15.38■□□□□ 0.05
SNCAIP-209ENST00000508017 ISCA1Q9BUE6 129 aa15.38■□□□□ 0.05
SNCAIP-209ENST00000508017 PARD6BQ9BYG5 372 aa15.38■□□□□ 0.05
SNCAIP-209ENST00000508017 SAMSN1Q9NSI8 373 aaKnown RBP15.38■□□□□ 0.05
SNCAIP-209ENST00000508017 KCPQ6ZWJ8 1503 aa15.38■□□□□ 0.05
SNCAIP-209ENST00000508017 A0A0U1RQJ8 604 aa15.38■□□□□ 0.05
SNCAIP-209ENST00000508017 POLR2DO15514 142 aaKnown RBP15.38■□□□□ 0.05
SNCAIP-209ENST00000508017 STX10O60499 249 aa15.38■□□□□ 0.05
SNCAIP-209ENST00000508017 ATRIPQ8WXE1 791 aa15.38■□□□□ 0.05
SNCAIP-209ENST00000508017 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.38■□□□□ 0.05
SNCAIP-209ENST00000508017 KCNJ14Q9UNX9 436 aa15.38■□□□□ 0.05
SNCAIP-209ENST00000508017 IDH1O75874 414 aaKnown RBP15.37■□□□□ 0.05
SNCAIP-209ENST00000508017 GTF2E1P29083 439 aaPredicted RBP15.37■□□□□ 0.05
SNCAIP-209ENST00000508017 MST1RQ04912 1400 aa15.37■□□□□ 0.05
SNCAIP-209ENST00000508017 SMC1AQ14683 1233 aaKnown RBP15.37■□□□□ 0.05
SNCAIP-209ENST00000508017 TMEM67Q5HYA8 995 aa15.37■□□□□ 0.05
SNCAIP-209ENST00000508017 RGS22Q8NE09 1264 aa15.37■□□□□ 0.05
SNCAIP-209ENST00000508017 TEX13AQ9BXU3 409 aaPredicted RBP15.37■□□□□ 0.05
SNCAIP-209ENST00000508017 ZSWIM4Q9H7M6 989 aa15.37■□□□□ 0.05
SNCAIP-209ENST00000508017 PARP4Q9UKK3 1724 aaKnown RBP15.37■□□□□ 0.05
SNCAIP-209ENST00000508017 CAPN2P17655 700 aa15.37■□□□□ 0.05
SNCAIP-209ENST00000508017 GYS2P54840 703 aa15.37■□□□□ 0.05
SNCAIP-209ENST00000508017 METTL24Q5JXM2 366 aa15.37■□□□□ 0.05
SNCAIP-209ENST00000508017 NOSTRINQ8IVI9 506 aa15.37■□□□□ 0.05
SNCAIP-209ENST00000508017 BBXQ8WY36 941 aaPredicted RBP15.37■□□□□ 0.05
SNCAIP-209ENST00000508017 FBXO2Q9UK22 296 aaPredicted RBP15.37■□□□□ 0.05
SNCAIP-209ENST00000508017 TACC3Q9Y6A5 838 aa15.37■□□□□ 0.05
SNCAIP-209ENST00000508017 ZNF532Q9HCE3 1301 aa15.37■□□□□ 0.05
SNCAIP-209ENST00000508017 GOLGA6L9A6NEM1 432 aa15.36■□□□□ 0.05
SNCAIP-209ENST00000508017 SOWAHDA6NJG2 315 aa15.36■□□□□ 0.05
SNCAIP-209ENST00000508017 ATP8B1O43520 1251 aa15.36■□□□□ 0.05
SNCAIP-209ENST00000508017 IFIT5Q13325 482 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms