RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 KCNB2Q92953 911 aa5.52□□□□□ -1.53
HMGB3P15-201ENST00000507326 CSRNP1Q96S65 589 aa5.52□□□□□ -1.53
HMGB3P15-201ENST00000507326 KRT82Q9NSB4 513 aa5.52□□□□□ -1.53
HMGB3P15-201ENST00000507326 PCDHGC5Q9Y5F6 944 aa5.52□□□□□ -1.53
HMGB3P15-201ENST00000507326 BIN1O00499 593 aa5.51□□□□□ -1.53
HMGB3P15-201ENST00000507326 FUT4P22083 530 aa5.51□□□□□ -1.53
HMGB3P15-201ENST00000507326 HNRNPUQ00839 825 aaKnown RBP eCLIP5.51□□□□□ -1.53
HMGB3P15-201ENST00000507326 ZNF648Q5T619 568 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P15-201ENST00000507326 PI16Q6UXB8 463 aa5.51□□□□□ -1.53
HMGB3P15-201ENST00000507326 RC3H2Q9HBD1 1191 aaKnown RBP5.51□□□□□ -1.53
HMGB3P15-201ENST00000507326 CARMIL2Q6F5E8 1435 aa5.5□□□□□ -1.53
HMGB3P15-201ENST00000507326 RNASE1P07998 156 aaKnown RBP5.5□□□□□ -1.53
HMGB3P15-201ENST00000507326 PPP2R3AQ06190 1150 aa5.5□□□□□ -1.53
HMGB3P15-201ENST00000507326 LCE1DQ5T752 114 aa5.5□□□□□ -1.53
HMGB3P15-201ENST00000507326 PDZD3Q86UT5 571 aa5.5□□□□□ -1.53
HMGB3P15-201ENST00000507326 TXNDC2Q86VQ3 553 aa5.5□□□□□ -1.53
HMGB3P15-201ENST00000507326 STK35Q8TDR2 534 aa5.5□□□□□ -1.53
HMGB3P15-201ENST00000507326 SSU72Q9NP77 194 aaKnown RBP5.5□□□□□ -1.53
HMGB3P15-201ENST00000507326 MBNL3Q9NUK0 354 aaKnown RBP5.5□□□□□ -1.53
HMGB3P15-201ENST00000507326 TMEM39AQ9NV64 488 aa5.5□□□□□ -1.53
HMGB3P15-201ENST00000507326 VAV3Q9UKW4 847 aa5.5□□□□□ -1.53
HMGB3P15-201ENST00000507326 PCOLCE2Q9UKZ9 415 aa5.5□□□□□ -1.53
HMGB3P15-201ENST00000507326 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P15-201ENST00000507326 NEFMP07197 916 aa5.49□□□□□ -1.53
HMGB3P15-201ENST00000507326 PRKCQQ04759 706 aa5.49□□□□□ -1.53
HMGB3P15-201ENST00000507326 IFI16Q16666 785 aaKnown RBP5.49□□□□□ -1.53
HMGB3P15-201ENST00000507326 AOC3Q16853 763 aa5.49□□□□□ -1.53
HMGB3P15-201ENST00000507326 SULF2Q8IWU5 870 aa5.49□□□□□ -1.53
HMGB3P15-201ENST00000507326 TOP6BLQ8N6T0 577 aa5.49□□□□□ -1.53
HMGB3P15-201ENST00000507326 PI4K2BQ8TCG2 481 aa5.49□□□□□ -1.53
HMGB3P15-201ENST00000507326 FAM168AQ92567 244 aa5.49□□□□□ -1.53
HMGB3P15-201ENST00000507326 ISL2Q96A47 359 aa5.49□□□□□ -1.53
HMGB3P15-201ENST00000507326 DMRTB1Q96MA1 342 aa5.49□□□□□ -1.53
HMGB3P15-201ENST00000507326 DUSP23Q9BVJ7 150 aa5.49□□□□□ -1.53
HMGB3P15-201ENST00000507326 NLRP2Q9NX02 1062 aa5.49□□□□□ -1.53
HMGB3P15-201ENST00000507326 ADAMTS6Q9UKP5 1117 aa5.49□□□□□ -1.53
HMGB3P15-201ENST00000507326 CEACAM5P06731 702 aa5.48□□□□□ -1.53
HMGB3P15-201ENST00000507326 ITIH2P19823 946 aa5.48□□□□□ -1.53
HMGB3P15-201ENST00000507326 OXCT1P55809 520 aa5.48□□□□□ -1.53
HMGB3P15-201ENST00000507326 ZNF124Q15973 351 aa5.48□□□□□ -1.53
HMGB3P15-201ENST00000507326 ATG4DQ86TL0 474 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P15-201ENST00000507326 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.48□□□□□ -1.53
HMGB3P15-201ENST00000507326 LRRN4CLQ8ND94 238 aa5.48□□□□□ -1.53
HMGB3P15-201ENST00000507326 ALKBH8Q96BT7 664 aaKnown RBP5.48□□□□□ -1.53
HMGB3P15-201ENST00000507326 HRASLS5Q96KN8 279 aa5.48□□□□□ -1.53
HMGB3P15-201ENST00000507326 ARID3AQ99856 593 aa5.48□□□□□ -1.53
HMGB3P15-201ENST00000507326 RBCK1Q9BYM8 510 aa5.48□□□□□ -1.53
HMGB3P15-201ENST00000507326 BCO2Q9BYV7 579 aa5.48□□□□□ -1.53
HMGB3P15-201ENST00000507326 PPP4R2Q9NY27 417 aa5.48□□□□□ -1.53
HMGB3P15-201ENST00000507326 PLAGL2Q9UPG8 496 aa5.48□□□□□ -1.53
HMGB3P15-201ENST00000507326 AKAP2Q9Y2D5 859 aa5.48□□□□□ -1.53
HMGB3P15-201ENST00000507326 TMEM265A0A087WTH1 108 aa5.47□□□□□ -1.53
HMGB3P15-201ENST00000507326 ARNTP27540 789 aa5.47□□□□□ -1.53
HMGB3P15-201ENST00000507326 MAP1SQ66K74 1059 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P15-201ENST00000507326 MKNK2Q9HBH9 465 aa5.47□□□□□ -1.53
HMGB3P15-201ENST00000507326 XRCC5P13010 732 aaKnown RBP5.46□□□□□ -1.54
HMGB3P15-201ENST00000507326 ZC3H12AQ5D1E8 599 aaKnown RBP5.46□□□□□ -1.54
HMGB3P15-201ENST00000507326 ANGEL2Q5VTE6 544 aaKnown RBP5.46□□□□□ -1.54
HMGB3P15-201ENST00000507326 RNF214Q8ND24 703 aa5.46□□□□□ -1.54
HMGB3P15-201ENST00000507326 GPBAR1Q8TDU6 330 aa5.46□□□□□ -1.54
HMGB3P15-201ENST00000507326 ACSBG1Q96GR2 724 aa5.46□□□□□ -1.54
HMGB3P15-201ENST00000507326 CBX8Q9HC52 389 aa5.46□□□□□ -1.54
HMGB3P15-201ENST00000507326 CSADQ9Y600 493 aa5.46□□□□□ -1.54
HMGB3P15-201ENST00000507326 FARP2O94887 1054 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P15-201ENST00000507326 NME2P22392 152 aa5.45□□□□□ -1.54
HMGB3P15-201ENST00000507326 ERVK-24P63145 666 aa5.45□□□□□ -1.54
HMGB3P15-201ENST00000507326 PPM1JQ5JR12 505 aa5.45□□□□□ -1.54
HMGB3P15-201ENST00000507326 NXPE4Q6UWF7 544 aa5.45□□□□□ -1.54
HMGB3P15-201ENST00000507326 MPRIPQ6WCQ1 1025 aa5.45□□□□□ -1.54
HMGB3P15-201ENST00000507326 TMC7Q7Z402 723 aa5.45□□□□□ -1.54
HMGB3P15-201ENST00000507326 CCER1Q8TC90 406 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P15-201ENST00000507326 HEXIM2Q96MH2 286 aaKnown RBP5.45□□□□□ -1.54
HMGB3P15-201ENST00000507326 EMILIN2Q9BXX0 1053 aa5.45□□□□□ -1.54
HMGB3P15-201ENST00000507326 KRTAP4-7Q9BYR0 210 aa5.45□□□□□ -1.54
HMGB3P15-201ENST00000507326 PRDM7Q9NQW5 492 aa5.45□□□□□ -1.54
HMGB3P15-201ENST00000507326 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.44□□□□□ -1.54
HMGB3P15-201ENST00000507326 RETREG2Q8NC44 543 aa5.44□□□□□ -1.54
HMGB3P15-201ENST00000507326 TMEM40Q8WWA1 233 aa5.44□□□□□ -1.54
HMGB3P15-201ENST00000507326 TNKS2Q9H2K2 1166 aa5.44□□□□□ -1.54
HMGB3P15-201ENST00000507326 PNMA6FA0A0J9YX94 578 aa5.43□□□□□ -1.54
HMGB3P15-201ENST00000507326 SOWAHDA6NJG2 315 aa5.43□□□□□ -1.54
HMGB3P15-201ENST00000507326 DCDC2CA8MYV0 355 aa5.43□□□□□ -1.54
HMGB3P15-201ENST00000507326 ZNF252P-AS1Q0IIN9 211 aa5.43□□□□□ -1.54
HMGB3P15-201ENST00000507326 IKZF1Q13422 519 aa5.43□□□□□ -1.54
HMGB3P15-201ENST00000507326 SLC23A3Q6PIS1 610 aa5.43□□□□□ -1.54
HMGB3P15-201ENST00000507326 UBE3DQ7Z6J8 389 aa5.43□□□□□ -1.54
HMGB3P15-201ENST00000507326 KSR1Q8IVT5 923 aa5.43□□□□□ -1.54
HMGB3P15-201ENST00000507326 GRIN3AQ8TCU5 1115 aa5.43□□□□□ -1.54
HMGB3P15-201ENST00000507326 PRDM10Q9NQV6 1147 aa5.43□□□□□ -1.54
HMGB3P15-201ENST00000507326 PICK1Q9NRD5 415 aa5.43□□□□□ -1.54
HMGB3P15-201ENST00000507326 BIN2Q9UBW5 565 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P15-201ENST00000507326 SNX11Q9Y5W9 270 aa5.43□□□□□ -1.54
HMGB3P15-201ENST00000507326 DBX1A6NMT0 343 aa5.42□□□□□ -1.54
HMGB3P15-201ENST00000507326 PKN1Q16512 942 aa5.42□□□□□ -1.54
HMGB3P15-201ENST00000507326 TPTE2Q6XPS3 522 aa5.42□□□□□ -1.54
HMGB3P15-201ENST00000507326 FAM214BQ7L5A3 538 aa5.42□□□□□ -1.54
HMGB3P15-201ENST00000507326 C12orf40Q86WS4 652 aa5.42□□□□□ -1.54
HMGB3P15-201ENST00000507326 NECAB3Q96P71 396 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P15-201ENST00000507326 GTF2IRD1Q9UHL9 959 aa5.42□□□□□ -1.54
HMGB3P15-201ENST00000507326 DCTN4Q9UJW0 460 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms