RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 ATP8A2Q9NTI2 1148 aa16.95■□□□□ 0.3
RNF4-208ENST00000507247 ZMYM6O95789 1325 aa16.95■□□□□ 0.3
RNF4-208ENST00000507247 CNTNAP1P78357 1384 aa16.94■□□□□ 0.3
RNF4-208ENST00000507247 IQCA1LA6NCM1 817 aa16.94■□□□□ 0.3
RNF4-208ENST00000507247 TCP10L2B9ZVM9 353 aa16.94■□□□□ 0.3
RNF4-208ENST00000507247 EPB41L2O43491 1005 aaKnown RBP16.94■□□□□ 0.3
RNF4-208ENST00000507247 MYO1BO43795 1136 aa16.94■□□□□ 0.3
RNF4-208ENST00000507247 EIF5BO60841 1220 aaKnown RBP16.94■□□□□ 0.3
RNF4-208ENST00000507247 GIMAP6Q6P9H5 292 aa16.94■□□□□ 0.3
RNF4-208ENST00000507247 ZFPM1Q8IX07 1006 aa16.94■□□□□ 0.3
RNF4-208ENST00000507247 NAPBQ9H115 298 aa16.94■□□□□ 0.3
RNF4-208ENST00000507247 TAF1DQ9H5J8 278 aaPredicted RBP16.94■□□□□ 0.3
RNF4-208ENST00000507247 VEZTQ9HBM0 779 aa16.94■□□□□ 0.3
RNF4-208ENST00000507247 TMOD2Q9NZR1 351 aa16.94■□□□□ 0.3
RNF4-208ENST00000507247 U3KPZ7 1027 aaPredicted RBP16.94■□□□□ 0.3
RNF4-208ENST00000507247 CYP2D7A0A087X1C5 515 aa16.93■□□□□ 0.3
RNF4-208ENST00000507247 SMIM22K7EJ46 135 aa16.93■□□□□ 0.3
RNF4-208ENST00000507247 TDO2P48775 406 aa16.93■□□□□ 0.3
RNF4-208ENST00000507247 EVX2Q03828 476 aa16.93■□□□□ 0.3
RNF4-208ENST00000507247 TCP10Q12799 353 aa16.93■□□□□ 0.3
RNF4-208ENST00000507247 NECTIN1Q15223 517 aa16.93■□□□□ 0.3
RNF4-208ENST00000507247 CTR9Q6PD62 1173 aa16.93■□□□□ 0.3
RNF4-208ENST00000507247 NACAP1Q9BZK3 213 aa16.93■□□□□ 0.3
RNF4-208ENST00000507247 OSBPL5Q9H0X9 879 aaPredicted RBP16.93■□□□□ 0.3
RNF4-208ENST00000507247 RRAGCQ9HB90 399 aa16.93■□□□□ 0.3
RNF4-208ENST00000507247 SAP30BPQ9UHR5 308 aaKnown RBP16.93■□□□□ 0.3
RNF4-208ENST00000507247 SCAF8Q9UPN6 1271 aaKnown RBP16.93■□□□□ 0.3
RNF4-208ENST00000507247 USP17L12C9JPN9 530 aa16.92■□□□□ 0.3
RNF4-208ENST00000507247 USP17L21D6R901 530 aa16.92■□□□□ 0.3
RNF4-208ENST00000507247 NPM3O75607 178 aaKnown RBP16.92■□□□□ 0.3
RNF4-208ENST00000507247 CYP2D6P10635 497 aa16.92■□□□□ 0.3
RNF4-208ENST00000507247 HSPA4P34932 840 aa16.92■□□□□ 0.3
RNF4-208ENST00000507247 SLC4A8Q2Y0W8 1093 aa16.92■□□□□ 0.3
RNF4-208ENST00000507247 ANGEL2Q5VTE6 544 aaKnown RBP16.92■□□□□ 0.3
RNF4-208ENST00000507247 FKBP1CQ5VVH2 108 aa16.92■□□□□ 0.3
RNF4-208ENST00000507247 USP50Q70EL3 339 aaPredicted RBP16.92■□□□□ 0.3
RNF4-208ENST00000507247 MCM9Q9NXL9 1143 aa16.92■□□□□ 0.3
RNF4-208ENST00000507247 GGA3Q9NZ52 723 aa16.92■□□□□ 0.3
RNF4-208ENST00000507247 SLC27A2O14975 620 aa16.91■□□□□ 0.3
RNF4-208ENST00000507247 ENTPD3O75355 529 aa16.91■□□□□ 0.3
RNF4-208ENST00000507247 HAND2P61296 217 aa16.91■□□□□ 0.3
RNF4-208ENST00000507247 CREB3L3Q68CJ9 461 aa16.91■□□□□ 0.3
RNF4-208ENST00000507247 SH3BP5LQ7L8J4 393 aa16.91■□□□□ 0.3
RNF4-208ENST00000507247 DDRGK1Q96HY6 314 aa16.91■□□□□ 0.3
RNF4-208ENST00000507247 NBPF3Q9H094 633 aa16.91■□□□□ 0.3
RNF4-208ENST00000507247 ARPP21Q9UBL0 812 aaPredicted RBP16.91■□□□□ 0.3
RNF4-208ENST00000507247 PALD1Q9ULE6 856 aa16.91■□□□□ 0.3
RNF4-208ENST00000507247 TAF6LQ9Y6J9 622 aa16.91■□□□□ 0.3
RNF4-208ENST00000507247 COL2A1P02458 1487 aaPredicted RBP16.91■□□□□ 0.3
RNF4-208ENST00000507247 DDTLA6NHG4 134 aaPredicted RBP16.9■□□□□ 0.3
RNF4-208ENST00000507247 CYP21A2P08686 494 aa16.9■□□□□ 0.3
RNF4-208ENST00000507247 SBK1Q52WX2 424 aa16.9■□□□□ 0.3
RNF4-208ENST00000507247 EAPPQ56P03 285 aaPredicted RBP16.9■□□□□ 0.3
RNF4-208ENST00000507247 RASEFQ8IZ41 740 aa16.9■□□□□ 0.3
RNF4-208ENST00000507247 C22orf23Q9BZE7 217 aa16.9■□□□□ 0.3
RNF4-208ENST00000507247 CTNNA3Q9UI47 895 aa16.9■□□□□ 0.3
RNF4-208ENST00000507247 TACC3Q9Y6A5 838 aa16.9■□□□□ 0.3
RNF4-208ENST00000507247 MYH8P13535 1937 aa16.9■□□□□ 0.3
RNF4-208ENST00000507247 ATRNL1Q5VV63 1379 aa16.89■□□□□ 0.3
RNF4-208ENST00000507247 MINDY4BA8MYZ0 360 aa16.89■□□□□ 0.29
RNF4-208ENST00000507247 POTEIP0CG38 1075 aa16.89■□□□□ 0.29
RNF4-208ENST00000507247 POTEJP0CG39 1038 aa16.89■□□□□ 0.29
RNF4-208ENST00000507247 VEGFAP15692 232 aaPredicted RBP16.89■□□□□ 0.29
RNF4-208ENST00000507247 HSPA6P17066 643 aa16.89■□□□□ 0.29
RNF4-208ENST00000507247 PLCD1P51178 756 aa16.89■□□□□ 0.29
RNF4-208ENST00000507247 CTDSPL2Q05D32 466 aa16.89■□□□□ 0.29
RNF4-208ENST00000507247 PPARAQ07869 468 aa16.89■□□□□ 0.29
RNF4-208ENST00000507247 IMMTQ16891 758 aaKnown RBP16.89■□□□□ 0.29
RNF4-208ENST00000507247 C12orf60Q5U649 245 aa16.89■□□□□ 0.29
RNF4-208ENST00000507247 FAM83AQ86UY5 434 aa16.89■□□□□ 0.29
RNF4-208ENST00000507247 APOBEC3FQ8IUX4 373 aaKnown RBP16.89■□□□□ 0.29
RNF4-208ENST00000507247 CDAN1Q8IWY9 1227 aa16.89■□□□□ 0.29
RNF4-208ENST00000507247 FAM151AQ8WW52 585 aa16.89■□□□□ 0.29
RNF4-208ENST00000507247 KCNB2Q92953 911 aa16.89■□□□□ 0.29
RNF4-208ENST00000507247 TMEM39BQ9GZU3 492 aa16.89■□□□□ 0.29
RNF4-208ENST00000507247 PGAP2Q9UHJ9 254 aa16.89■□□□□ 0.29
RNF4-208ENST00000507247 PITPNM2Q9BZ72 1349 aa16.89■□□□□ 0.29
RNF4-208ENST00000507247 ZNF213O14771 459 aa16.88■□□□□ 0.29
RNF4-208ENST00000507247 POLR3DP05423 398 aaPredicted RBP16.88■□□□□ 0.29
RNF4-208ENST00000507247 TNFAIP1Q13829 316 aa16.88■□□□□ 0.29
RNF4-208ENST00000507247 RASA3Q14644 834 aa16.88■□□□□ 0.29
RNF4-208ENST00000507247 PNMA8AQ86V59 439 aaPredicted RBP16.88■□□□□ 0.29
RNF4-208ENST00000507247 TBC1D10CQ8IV04 446 aa16.88■□□□□ 0.29
RNF4-208ENST00000507247 TBC1D32Q96NH3 1257 aa16.88■□□□□ 0.29
RNF4-208ENST00000507247 UPF2Q9HAU5 1272 aaKnown RBP16.88■□□□□ 0.29
RNF4-208ENST00000507247 ANAPC4Q9UJX5 808 aa16.88■□□□□ 0.29
RNF4-208ENST00000507247 ROBO3Q96MS0 1386 aa16.88■□□□□ 0.29
RNF4-208ENST00000507247 TOMM70O94826 608 aa16.87■□□□□ 0.29
RNF4-208ENST00000507247 SLURP2P0DP57 97 aa16.87■□□□□ 0.29
RNF4-208ENST00000507247 MCCP23508 829 aa16.87■□□□□ 0.29
RNF4-208ENST00000507247 TNNI2P48788 182 aa16.87■□□□□ 0.29
RNF4-208ENST00000507247 RBM25P49756 843 aaKnown RBP16.87■□□□□ 0.29
RNF4-208ENST00000507247 STOX1Q6ZVD7 989 aa16.87■□□□□ 0.29
RNF4-208ENST00000507247 STK11IPQ8N1F8 1099 aa16.87■□□□□ 0.29
RNF4-208ENST00000507247 ZC3H15Q8WU90 426 aaKnown RBP16.87■□□□□ 0.29
RNF4-208ENST00000507247 DYNLL2Q96FJ2 89 aa16.87■□□□□ 0.29
RNF4-208ENST00000507247 TEPSINQ96N21 525 aa16.87■□□□□ 0.29
RNF4-208ENST00000507247 SNX14Q9Y5W7 946 aa16.87■□□□□ 0.29
RNF4-208ENST00000507247 RNF20Q5VTR2 975 aa16.86■□□□□ 0.29
RNF4-208ENST00000507247 TTC6Q86TZ1 520 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms