RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 DDX60LQ5H9U9 1706 aaKnown RBP9.28□□□□□ -0.92
VCAN-207ENST00000507162 TMEM31Q5JXX7 168 aa9.27□□□□□ -0.93
VCAN-207ENST00000507162 POTEEQ6S8J3 1075 aa9.27□□□□□ -0.93
VCAN-207ENST00000507162 FAM83AQ86UY5 434 aa9.27□□□□□ -0.93
VCAN-207ENST00000507162 TRIB2Q92519 343 aa9.27□□□□□ -0.93
VCAN-207ENST00000507162 GAS2L1Q99501 681 aaPredicted RBP9.27□□□□□ -0.93
VCAN-207ENST00000507162 ZNF112Q9UJU3 913 aa9.27□□□□□ -0.93
VCAN-207ENST00000507162 GJD2Q9UKL4 321 aa9.27□□□□□ -0.93
VCAN-207ENST00000507162 ATP11BQ9Y2G3 1177 aa9.27□□□□□ -0.93
VCAN-207ENST00000507162 A0A0G2JLL6 359 aaPredicted RBP9.26□□□□□ -0.93
VCAN-207ENST00000507162 ELL2O00472 640 aaPredicted RBP9.26□□□□□ -0.93
VCAN-207ENST00000507162 CCND3P30281 292 aaPredicted RBP9.26□□□□□ -0.93
VCAN-207ENST00000507162 CACNB2Q08289 660 aaPredicted RBP9.26□□□□□ -0.93
VCAN-207ENST00000507162 TCP10Q12799 353 aa9.26□□□□□ -0.93
VCAN-207ENST00000507162 CHAF1AQ13111 956 aaPredicted RBP9.26□□□□□ -0.93
VCAN-207ENST00000507162 GRIK5Q16478 980 aa9.26□□□□□ -0.93
VCAN-207ENST00000507162 UBE3BQ7Z3V4 1068 aa9.26□□□□□ -0.93
VCAN-207ENST00000507162 PRRT2Q7Z6L0 340 aaPredicted RBP9.26□□□□□ -0.93
VCAN-207ENST00000507162 TEKT1Q969V4 418 aa9.26□□□□□ -0.93
VCAN-207ENST00000507162 ZNF576Q9H609 170 aa9.26□□□□□ -0.93
VCAN-207ENST00000507162 PICK1Q9NRD5 415 aa9.26□□□□□ -0.93
VCAN-207ENST00000507162 MAP3K2Q9Y2U5 619 aa9.26□□□□□ -0.93
VCAN-207ENST00000507162 TCF20Q9UGU0 1960 aaKnown RBP9.25□□□□□ -0.93
VCAN-207ENST00000507162 ANKRD18BA2A2Z9 1011 aa9.25□□□□□ -0.93
VCAN-207ENST00000507162 DDX58O95786 925 aaKnown RBP9.25□□□□□ -0.93
VCAN-207ENST00000507162 HOXB7P09629 217 aa9.25□□□□□ -0.93
VCAN-207ENST00000507162 IGFBP4P22692 258 aa9.25□□□□□ -0.93
VCAN-207ENST00000507162 HIBADHP31937 336 aaKnown RBP9.25□□□□□ -0.93
VCAN-207ENST00000507162 GYG1P46976 350 aa9.25□□□□□ -0.93
VCAN-207ENST00000507162 MRE11P49959 708 aa9.25□□□□□ -0.93
VCAN-207ENST00000507162 RTP1P59025 263 aa9.25□□□□□ -0.93
VCAN-207ENST00000507162 LMOD3Q0VAK6 560 aa9.25□□□□□ -0.93
VCAN-207ENST00000507162 FAM110CQ1W6H9 321 aa9.25□□□□□ -0.93
VCAN-207ENST00000507162 TDRD7Q8NHU6 1098 aaKnown RBP9.25□□□□□ -0.93
VCAN-207ENST00000507162 RNPC3Q96LT9 517 aaKnown RBP9.25□□□□□ -0.93
VCAN-207ENST00000507162 P2RX7Q99572 595 aaKnown RBP9.25□□□□□ -0.93
VCAN-207ENST00000507162 IQSEC3Q9UPP2 1182 aaPredicted RBP9.25□□□□□ -0.93
VCAN-207ENST00000507162 SLC45A1Q9Y2W3 748 aa9.25□□□□□ -0.93
VCAN-207ENST00000507162 SPEF2Q9C093 1822 aa9.24□□□□□ -0.93
VCAN-207ENST00000507162 TRIM75PA6NK02 468 aa9.24□□□□□ -0.93
VCAN-207ENST00000507162 FRAT2O75474 233 aaPredicted RBP9.24□□□□□ -0.93
VCAN-207ENST00000507162 IGKV5-2P06315 115 aa9.24□□□□□ -0.93
VCAN-207ENST00000507162 TMPOP42166 694 aaKnown RBP9.24□□□□□ -0.93
VCAN-207ENST00000507162 NEXNQ0ZGT2 675 aa9.24□□□□□ -0.93
VCAN-207ENST00000507162 CWF19L2Q2TBE0 894 aaKnown RBP9.24□□□□□ -0.93
VCAN-207ENST00000507162 NOL9Q5SY16 702 aaKnown RBP9.24□□□□□ -0.93
VCAN-207ENST00000507162 MAP3K21Q5TCX8 1036 aa9.24□□□□□ -0.93
VCAN-207ENST00000507162 PRDM12Q9H4Q4 367 aa9.24□□□□□ -0.93
VCAN-207ENST00000507162 CHMP3Q9Y3E7 222 aa9.24□□□□□ -0.93
VCAN-207ENST00000507162 AFG3L2Q9Y4W6 797 aa9.24□□□□□ -0.93
VCAN-207ENST00000507162 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.23□□□□□ -0.93
VCAN-207ENST00000507162 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.23□□□□□ -0.93
VCAN-207ENST00000507162 FAM86C2PA6NEL3 165 aa9.23□□□□□ -0.93
VCAN-207ENST00000507162 H7C1W4 665 aa9.23□□□□□ -0.93
VCAN-207ENST00000507162 BMP1P13497 986 aa9.23□□□□□ -0.93
VCAN-207ENST00000507162 ZKSCAN1P17029 563 aaPredicted RBP9.23□□□□□ -0.93
VCAN-207ENST00000507162 PTPRAP18433 802 aa9.23□□□□□ -0.93
VCAN-207ENST00000507162 DNAJB2P25686 324 aa9.23□□□□□ -0.93
VCAN-207ENST00000507162 HDLBPQ00341 1268 aaKnown RBP9.23□□□□□ -0.93
VCAN-207ENST00000507162 AKNAD1Q5T1N1 836 aa9.23□□□□□ -0.93
VCAN-207ENST00000507162 FKBP1CQ5VVH2 108 aa9.23□□□□□ -0.93
VCAN-207ENST00000507162 APOBEC3HQ6NTF7 200 aaKnown RBP9.23□□□□□ -0.93
VCAN-207ENST00000507162 FAM151AQ8WW52 585 aa9.23□□□□□ -0.93
VCAN-207ENST00000507162 TIFAQ96CG3 184 aa9.23□□□□□ -0.93
VCAN-207ENST00000507162 NUDT12Q9BQG2 462 aa9.23□□□□□ -0.93
VCAN-207ENST00000507162 PNMA3Q9UL41 463 aa9.23□□□□□ -0.93
VCAN-207ENST00000507162 PI4KAP2A4QPH2 592 aa9.22□□□□□ -0.93
VCAN-207ENST00000507162 CSF1RP07333 972 aa9.22□□□□□ -0.93
VCAN-207ENST00000507162 CNGA1P29973 690 aa9.22□□□□□ -0.93
VCAN-207ENST00000507162 TRIM26Q12899 539 aaPredicted RBP9.22□□□□□ -0.93
VCAN-207ENST00000507162 TREML2Q5T2D2 321 aa9.22□□□□□ -0.93
VCAN-207ENST00000507162 SH3RF1Q7Z6J0 888 aa9.22□□□□□ -0.93
VCAN-207ENST00000507162 VPS37DQ86XT2 251 aa9.22□□□□□ -0.93
VCAN-207ENST00000507162 SCYL3Q8IZE3 742 aa9.22□□□□□ -0.93
VCAN-207ENST00000507162 PI4KAP1Q8N8J0 262 aa9.22□□□□□ -0.93
VCAN-207ENST00000507162 ZDHHC15Q96MV8 337 aa9.22□□□□□ -0.93
VCAN-207ENST00000507162 TSPYL2Q9H2G4 693 aaPredicted RBP9.22□□□□□ -0.93
VCAN-207ENST00000507162 AGTPBP1Q9UPW5 1226 aa9.22□□□□□ -0.93
VCAN-207ENST00000507162 AK9Q5TCS8 1911 aa9.21□□□□□ -0.93
VCAN-207ENST00000507162 NEURL1BA8MQ27 555 aa9.21□□□□□ -0.94
VCAN-207ENST00000507162 GCLCP48506 637 aaPredicted RBP9.21□□□□□ -0.94
VCAN-207ENST00000507162 TFF2Q03403 129 aa9.21□□□□□ -0.94
VCAN-207ENST00000507162 IFIT5Q13325 482 aaKnown RBP9.21□□□□□ -0.94
VCAN-207ENST00000507162 CCL14Q16627 93 aa9.21□□□□□ -0.94
VCAN-207ENST00000507162 TAF7LQ5H9L4 462 aa9.21□□□□□ -0.94
VCAN-207ENST00000507162 KSR2Q6VAB6 950 aa9.21□□□□□ -0.94
VCAN-207ENST00000507162 LDHAL6AQ6ZMR3 332 aa9.21□□□□□ -0.94
VCAN-207ENST00000507162 CCDC129Q6ZRS4 1044 aa9.21□□□□□ -0.94
VCAN-207ENST00000507162 CCDC84Q86UT8 332 aaPredicted RBP9.21□□□□□ -0.94
VCAN-207ENST00000507162 CCAR1Q8IX12 1150 aaKnown RBP9.21□□□□□ -0.94
VCAN-207ENST00000507162 TRMT44Q8IYL2 757 aaKnown RBP9.21□□□□□ -0.94
VCAN-207ENST00000507162 MICALL1Q8N3F8 863 aa9.21□□□□□ -0.94
VCAN-207ENST00000507162 ZNF594Q96JF6 807 aaPredicted RBP9.21□□□□□ -0.94
VCAN-207ENST00000507162 FAM84BQ96KN1 310 aaPredicted RBP9.21□□□□□ -0.94
VCAN-207ENST00000507162 CNNM1Q9NRU3 951 aa9.21□□□□□ -0.94
VCAN-207ENST00000507162 LRRFIP2Q9Y608 721 aaKnown RBP9.21□□□□□ -0.94
VCAN-207ENST00000507162 TRIM43BA6NCK2 446 aa9.2□□□□□ -0.94
VCAN-207ENST00000507162 PEX10O60683 326 aa9.2□□□□□ -0.94
VCAN-207ENST00000507162 EPHB4P54760 987 aa9.2□□□□□ -0.94
VCAN-207ENST00000507162 SKIV2LQ15477 1246 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms