RNA–Protein interactions for RNA: ENST00000507063.1

NEDD4-206, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4, Length 457 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-206ENST00000507063 RSBN1LQ6PCB5 846 aaPredicted RBP8.36□□□□□ -1.07
NEDD4-206ENST00000507063 PI4KAP1Q8N8J0 262 aa8.36□□□□□ -1.07
NEDD4-206ENST00000507063 ZSCAN1Q8NBB4 408 aa8.36□□□□□ -1.07
NEDD4-206ENST00000507063 CCDC191Q8NCU4 936 aa8.36□□□□□ -1.07
NEDD4-206ENST00000507063 DCPSQ96C86 337 aaKnown RBP8.36□□□□□ -1.07
NEDD4-206ENST00000507063 GMLQ99445 158 aa8.36□□□□□ -1.07
NEDD4-206ENST00000507063 EYA3Q99504 573 aa8.36□□□□□ -1.07
NEDD4-206ENST00000507063 GREM2Q9H772 168 aa8.36□□□□□ -1.07
NEDD4-206ENST00000507063 GBA2Q9HCG7 927 aaPredicted RBP8.36□□□□□ -1.07
NEDD4-206ENST00000507063 CASP8AP2Q9UKL3 1982 aa8.35□□□□□ -1.07
NEDD4-206ENST00000507063 SNAP23O00161 211 aa8.35□□□□□ -1.07
NEDD4-206ENST00000507063 TRPA1O75762 1119 aa8.35□□□□□ -1.07
NEDD4-206ENST00000507063 RPS12P25398 132 aaKnown RBP8.35□□□□□ -1.07
NEDD4-206ENST00000507063 ZNF157P51786 506 aaPredicted RBP8.35□□□□□ -1.07
NEDD4-206ENST00000507063 ZNF280AP59817 542 aaPredicted RBP8.35□□□□□ -1.07
NEDD4-206ENST00000507063 DGKZQ13574 1117 aa8.35□□□□□ -1.07
NEDD4-206ENST00000507063 NBPF9Q3BBW0 867 aa8.35□□□□□ -1.07
NEDD4-206ENST00000507063 ANKRD18AQ8IVF6 992 aa8.35□□□□□ -1.07
NEDD4-206ENST00000507063 C2orf69Q8N8R5 385 aa8.35□□□□□ -1.07
NEDD4-206ENST00000507063 TTLL11Q8NHH1 800 aa8.35□□□□□ -1.07
NEDD4-206ENST00000507063 CDCA5Q96FF9 252 aa8.35□□□□□ -1.07
NEDD4-206ENST00000507063 CSRNP1Q96S65 589 aa8.35□□□□□ -1.07
NEDD4-206ENST00000507063 MINPP1Q9UNW1 487 aa8.35□□□□□ -1.07
NEDD4-206ENST00000507063 CTSWP56202 376 aa8.34□□□□□ -1.07
NEDD4-206ENST00000507063 NOGQ13253 232 aa8.34□□□□□ -1.07
NEDD4-206ENST00000507063 MYSM1Q5VVJ2 828 aa8.34□□□□□ -1.07
NEDD4-206ENST00000507063 CCDC30Q5VVM6 783 aa8.34□□□□□ -1.07
NEDD4-206ENST00000507063 KSR2Q6VAB6 950 aa8.34□□□□□ -1.07
NEDD4-206ENST00000507063 KDM4CQ9H3R0 1056 aa8.34□□□□□ -1.07
NEDD4-206ENST00000507063 MYOZ2Q9NPC6 264 aa8.34□□□□□ -1.07
NEDD4-206ENST00000507063 RNF186Q9NXI6 227 aa8.34□□□□□ -1.07
NEDD4-206ENST00000507063 FZD1Q9UP38 647 aa8.34□□□□□ -1.07
NEDD4-206ENST00000507063 CENPFP49454 3210 aa8.34□□□□□ -1.07
NEDD4-206ENST00000507063 XDHP47989 1333 aa8.33□□□□□ -1.08
NEDD4-206ENST00000507063 USP17L3A6NCW0 530 aa8.33□□□□□ -1.08
NEDD4-206ENST00000507063 USP17L4A6NCW7 530 aa8.33□□□□□ -1.08
NEDD4-206ENST00000507063 NEURL1BA8MQ27 555 aa8.33□□□□□ -1.08
NEDD4-206ENST00000507063 UBE2Q2LH0YL09 131 aa8.33□□□□□ -1.08
NEDD4-206ENST00000507063 SPTLC1O15269 473 aa8.33□□□□□ -1.08
NEDD4-206ENST00000507063 SIAH2O43255 324 aa8.33□□□□□ -1.08
NEDD4-206ENST00000507063 USP17L8P0C7I0 530 aa8.33□□□□□ -1.08
NEDD4-206ENST00000507063 CCNYL3P0C7X3 344 aa8.33□□□□□ -1.08
NEDD4-206ENST00000507063 GMPRP36959 345 aa8.33□□□□□ -1.08
NEDD4-206ENST00000507063 LCE2CQ5TA81 110 aa8.33□□□□□ -1.08
NEDD4-206ENST00000507063 USP17L1Q7RTZ2 530 aa8.33□□□□□ -1.08
NEDD4-206ENST00000507063 UBE3BQ7Z3V4 1068 aa8.33□□□□□ -1.08
NEDD4-206ENST00000507063 WWC1Q8IX03 1113 aa8.33□□□□□ -1.08
NEDD4-206ENST00000507063 LIMD1Q9UGP4 676 aa8.33□□□□□ -1.08
NEDD4-206ENST00000507063 SPEF2Q9C093 1822 aa8.32□□□□□ -1.08
NEDD4-206ENST00000507063 BRCA2P51587 3418 aa8.32□□□□□ -1.08
NEDD4-206ENST00000507063 H7C1W4 665 aa8.32□□□□□ -1.08
NEDD4-206ENST00000507063 CA12O43570 354 aa8.32□□□□□ -1.08
NEDD4-206ENST00000507063 DDX58O95786 925 aaKnown RBP8.32□□□□□ -1.08
NEDD4-206ENST00000507063 BMP1P13497 986 aa8.32□□□□□ -1.08
NEDD4-206ENST00000507063 ATP2B4P23634 1241 aa8.32□□□□□ -1.08
NEDD4-206ENST00000507063 RGS19P49795 217 aa8.32□□□□□ -1.08
NEDD4-206ENST00000507063 CCT4P50991 539 aaKnown RBP8.32□□□□□ -1.08
NEDD4-206ENST00000507063 CASP7P55210 303 aa8.32□□□□□ -1.08
NEDD4-206ENST00000507063 MLLT1Q03111 559 aaPredicted RBP8.32□□□□□ -1.08
NEDD4-206ENST00000507063 PRKG1Q13976 671 aa8.32□□□□□ -1.08
NEDD4-206ENST00000507063 TWISTNBQ3B726 338 aaPredicted RBP8.32□□□□□ -1.08
NEDD4-206ENST00000507063 DACT2Q5SW24 774 aa8.32□□□□□ -1.08
NEDD4-206ENST00000507063 RASAL3Q86YV0 1011 aa8.32□□□□□ -1.08
NEDD4-206ENST00000507063 AGBL3Q8NEM8 1001 aa8.32□□□□□ -1.08
NEDD4-206ENST00000507063 FAM117AQ9C073 453 aa8.32□□□□□ -1.08
NEDD4-206ENST00000507063 BSDC1Q9NW68 430 aaPredicted RBP8.32□□□□□ -1.08
NEDD4-206ENST00000507063 PCDHAC2Q9Y5I4 1007 aa8.32□□□□□ -1.08
NEDD4-206ENST00000507063 H3BM21 787 aa8.31□□□□□ -1.08
NEDD4-206ENST00000507063 WNT10BO00744 389 aa8.31□□□□□ -1.08
NEDD4-206ENST00000507063 TAF5LO75529 589 aa8.31□□□□□ -1.08
NEDD4-206ENST00000507063 SASH1O94885 1247 aa8.31□□□□□ -1.08
NEDD4-206ENST00000507063 TBC1D8O95759 1140 aa8.31□□□□□ -1.08
NEDD4-206ENST00000507063 ITGA6P23229 1130 aa8.31□□□□□ -1.08
NEDD4-206ENST00000507063 CALD1Q05682 793 aaKnown RBP8.31□□□□□ -1.08
NEDD4-206ENST00000507063 TRIM46Q7Z4K8 759 aa8.31□□□□□ -1.08
NEDD4-206ENST00000507063 PODNQ7Z5L7 613 aa8.31□□□□□ -1.08
NEDD4-206ENST00000507063 HELBQ8NG08 1087 aaPredicted RBP8.31□□□□□ -1.08
NEDD4-206ENST00000507063 R3HDMLQ9H3Y0 253 aa8.31□□□□□ -1.08
NEDD4-206ENST00000507063 ZNF646O15015 1829 aaPredicted RBP8.31□□□□□ -1.08
NEDD4-206ENST00000507063 AOX1Q06278 1338 aa8.3□□□□□ -1.08
NEDD4-206ENST00000507063 HTTP42858 3142 aa8.3□□□□□ -1.08
NEDD4-206ENST00000507063 MKI67P46013 3256 aaKnown RBP8.3□□□□□ -1.08
NEDD4-206ENST00000507063 F6X3S4 739 aa8.3□□□□□ -1.08
NEDD4-206ENST00000507063 GJA5P36382 358 aa8.3□□□□□ -1.08
NEDD4-206ENST00000507063 SOX10P56693 466 aa8.3□□□□□ -1.08
NEDD4-206ENST00000507063 FLIIQ13045 1269 aa8.3□□□□□ -1.08
NEDD4-206ENST00000507063 GCKRQ14397 625 aa8.3□□□□□ -1.08
NEDD4-206ENST00000507063 PTPRNQ16849 979 aa8.3□□□□□ -1.08
NEDD4-206ENST00000507063 KIAA0825Q8IV33 1275 aa8.3□□□□□ -1.08
NEDD4-206ENST00000507063 CDC5LQ99459 802 aaKnown RBP8.3□□□□□ -1.08
NEDD4-206ENST00000507063 JAG2Q9Y219 1238 aa8.3□□□□□ -1.08
NEDD4-206ENST00000507063 MED23Q9ULK4 1368 aa8.3□□□□□ -1.08
NEDD4-206ENST00000507063 ZNF804BA4D1E1 1349 aa8.29□□□□□ -1.08
NEDD4-206ENST00000507063 PSME4Q14997 1843 aa8.29□□□□□ -1.08
NEDD4-206ENST00000507063 CFAP99D6REC4 459 aa8.29□□□□□ -1.08
NEDD4-206ENST00000507063 VAMP4O75379 141 aa8.29□□□□□ -1.08
NEDD4-206ENST00000507063 CSF1RP07333 972 aa8.29□□□□□ -1.08
NEDD4-206ENST00000507063 HSP90B1P14625 803 aaKnown RBP8.29□□□□□ -1.08
NEDD4-206ENST00000507063 VARSP26640 1264 aaKnown RBP8.29□□□□□ -1.08
NEDD4-206ENST00000507063 GTF2IP78347 998 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms