RNA–Protein interactions for RNA: ENST00000506874.1

SNX2-205, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 200 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-205ENST00000506874 GCC1Q96CN9 775 aa20.08■□□□□ 0.81
SNX2-205ENST00000506874 TRIM47Q96LD4 638 aa20.08■□□□□ 0.81
SNX2-205ENST00000506874 PICK1Q9NRD5 415 aa20.08■□□□□ 0.81
SNX2-205ENST00000506874 PCDH10Q9P2E7 1040 aa20.08■□□□□ 0.81
SNX2-205ENST00000506874 ZHX2Q9Y6X8 837 aa20.08■□□□□ 0.81
SNX2-205ENST00000506874 ATRNL1Q5VV63 1379 aa20.08■□□□□ 0.8
SNX2-205ENST00000506874 ADGRA2Q96PE1 1338 aa20.07■□□□□ 0.8
SNX2-205ENST00000506874 DDTLA6NHG4 134 aaPredicted RBP20.07■□□□□ 0.8
SNX2-205ENST00000506874 PHF20L1A8MW92 1017 aa20.07■□□□□ 0.8
SNX2-205ENST00000506874 CYP2C8P10632 490 aa20.07■□□□□ 0.8
SNX2-205ENST00000506874 MVPQ14764 893 aaKnown RBP20.07■□□□□ 0.8
SNX2-205ENST00000506874 ERICH6Q7L0X2 663 aa20.07■□□□□ 0.8
SNX2-205ENST00000506874 SCYL3Q8IZE3 742 aa20.07■□□□□ 0.8
SNX2-205ENST00000506874 DDX4Q9NQI0 724 aaKnown RBP20.07■□□□□ 0.8
SNX2-205ENST00000506874 SRRDQ9UH36 339 aa20.07■□□□□ 0.8
SNX2-205ENST00000506874 TNNQ9UQP3 1299 aa20.07■□□□□ 0.8
SNX2-205ENST00000506874 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.07■□□□□ 0.8
SNX2-205ENST00000506874 CXCL11O14625 94 aa20.06■□□□□ 0.8
SNX2-205ENST00000506874 PRMT2P55345 433 aa20.06■□□□□ 0.8
SNX2-205ENST00000506874 GORABQ5T7V8 394 aa20.06■□□□□ 0.8
SNX2-205ENST00000506874 GPAT2Q6NUI2 795 aa20.06■□□□□ 0.8
SNX2-205ENST00000506874 GADL1Q6ZQY3 521 aa20.06■□□□□ 0.8
SNX2-205ENST00000506874 FRAT1Q92837 279 aaPredicted RBP20.06■□□□□ 0.8
SNX2-205ENST00000506874 PARK7Q99497 189 aaKnown RBP20.06■□□□□ 0.8
SNX2-205ENST00000506874 MROH7-TTC4A0A0A0MT08 1334 aa20.05■□□□□ 0.8
SNX2-205ENST00000506874 PDS5AQ29RF7 1337 aaKnown RBP20.05■□□□□ 0.8
SNX2-205ENST00000506874 PTPRAP18433 802 aa20.05■□□□□ 0.8
SNX2-205ENST00000506874 OSBPP22059 807 aa20.05■□□□□ 0.8
SNX2-205ENST00000506874 HOXD10P28358 340 aa20.05■□□□□ 0.8
SNX2-205ENST00000506874 MECOMQ03112 1051 aa20.05■□□□□ 0.8
SNX2-205ENST00000506874 MTFR1Q15390 333 aa20.05■□□□□ 0.8
SNX2-205ENST00000506874 RAET1EQ8TD07 263 aa20.05■□□□□ 0.8
SNX2-205ENST00000506874 FAM163AQ96GL9 167 aaPredicted RBP20.05■□□□□ 0.8
SNX2-205ENST00000506874 RFX7Q2KHR2 1363 aa20.05■□□□□ 0.8
SNX2-205ENST00000506874 CEP290O15078 2479 aa20.04■□□□□ 0.8
SNX2-205ENST00000506874 MYPNQ86TC9 1320 aa20.04■□□□□ 0.8
SNX2-205ENST00000506874 ZBTB22O15209 634 aa20.04■□□□□ 0.8
SNX2-205ENST00000506874 TRIM27P14373 513 aa20.04■□□□□ 0.8
SNX2-205ENST00000506874 MTX1Q13505 466 aa20.04■□□□□ 0.8
SNX2-205ENST00000506874 HABP4Q5JVS0 413 aaKnown RBP20.04■□□□□ 0.8
SNX2-205ENST00000506874 PI16Q6UXB8 463 aa20.04■□□□□ 0.8
SNX2-205ENST00000506874 TBC1D9Q6ZT07 1266 aa20.04■□□□□ 0.8
SNX2-205ENST00000506874 CLUAP1Q96AJ1 413 aa20.04■□□□□ 0.8
SNX2-205ENST00000506874 HMG20BQ9P0W2 317 aa20.04■□□□□ 0.8
SNX2-205ENST00000506874 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.04■□□□□ 0.8
SNX2-205ENST00000506874 A0A0G2JLL6 359 aaPredicted RBP20.03■□□□□ 0.8
SNX2-205ENST00000506874 IPO8O15397 1037 aaKnown RBP20.03■□□□□ 0.8
SNX2-205ENST00000506874 BCAR3O75815 825 aa20.03■□□□□ 0.8
SNX2-205ENST00000506874 GNAI2P04899 355 aa20.03■□□□□ 0.8
SNX2-205ENST00000506874 FASTKD5Q7L8L6 764 aaKnown RBP20.03■□□□□ 0.8
SNX2-205ENST00000506874 PRRT2Q7Z6L0 340 aaPredicted RBP20.03■□□□□ 0.8
SNX2-205ENST00000506874 CCDC84Q86UT8 332 aaPredicted RBP20.03■□□□□ 0.8
SNX2-205ENST00000506874 ZNF384Q8TF68 577 aa20.03■□□□□ 0.8
SNX2-205ENST00000506874 AFG3L2Q9Y4W6 797 aa20.03■□□□□ 0.8
SNX2-205ENST00000506874 MGAMO43451 1857 aa20.03■□□□□ 0.8
SNX2-205ENST00000506874 DOCK1Q14185 1865 aa20.03■□□□□ 0.8
SNX2-205ENST00000506874 PTPRFP10586 1907 aa20.02■□□□□ 0.8
SNX2-205ENST00000506874 GPR75-ASB3A0A0A6YYF3 556 aa20.02■□□□□ 0.8
SNX2-205ENST00000506874 PNMA6EA0A0J9YXQ4 647 aa20.02■□□□□ 0.8
SNX2-205ENST00000506874 FAM196BA6NMK8 535 aa20.02■□□□□ 0.8
SNX2-205ENST00000506874 BCRP11274 1271 aa20.02■□□□□ 0.8
SNX2-205ENST00000506874 GRK4P32298 578 aa20.02■□□□□ 0.8
SNX2-205ENST00000506874 RHBDL3P58872 404 aa20.02■□□□□ 0.8
SNX2-205ENST00000506874 G3BP1Q13283 466 aaKnown RBP eCLIP20.02■□□□□ 0.8
SNX2-205ENST00000506874 SPATA5Q8NB90 893 aa20.02■□□□□ 0.8
SNX2-205ENST00000506874 RAI14Q9P0K7 980 aa20.02■□□□□ 0.8
SNX2-205ENST00000506874 BIN2Q9UBW5 565 aaPredicted RBP20.02■□□□□ 0.8
SNX2-205ENST00000506874 TRIM75PA6NK02 468 aa20.01■□□□□ 0.79
SNX2-205ENST00000506874 CTNND1O60716 968 aaKnown RBP20.01■□□□□ 0.79
SNX2-205ENST00000506874 FCGRTP55899 365 aa20.01■□□□□ 0.79
SNX2-205ENST00000506874 MAP3K10Q02779 954 aa20.01■□□□□ 0.79
SNX2-205ENST00000506874 PRKCZQ05513 592 aa20.01■□□□□ 0.79
SNX2-205ENST00000506874 ATF7IPQ6VMQ6 1270 aa20.01■□□□□ 0.79
SNX2-205ENST00000506874 PHIPQ8WWQ0 1821 aa20■□□□□ 0.79
SNX2-205ENST00000506874 LDHCP07864 332 aa20■□□□□ 0.79
SNX2-205ENST00000506874 GSTO1P78417 241 aa20■□□□□ 0.79
SNX2-205ENST00000506874 NSUN4Q96CB9 384 aaKnown RBP20■□□□□ 0.79
SNX2-205ENST00000506874 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20■□□□□ 0.79
SNX2-205ENST00000506874 GABRQQ9UN88 632 aa20■□□□□ 0.79
SNX2-205ENST00000506874 CCL5P13501 91 aa19.98■□□□□ 0.79
SNX2-205ENST00000506874 ARID4AP29374 1257 aaPredicted RBP19.98■□□□□ 0.79
SNX2-205ENST00000506874 MCAMP43121 646 aa19.98■□□□□ 0.79
SNX2-205ENST00000506874 SMCR8Q8TEV9 937 aaPredicted RBP19.98■□□□□ 0.79
SNX2-205ENST00000506874 SHISA4Q96DD7 197 aa19.98■□□□□ 0.79
SNX2-205ENST00000506874 LRP2BPQ9P2M1 347 aa19.98■□□□□ 0.79
SNX2-205ENST00000506874 DOCK3Q8IZD9 2030 aa19.97■□□□□ 0.79
SNX2-205ENST00000506874 UBXN2AP68543 259 aa19.97■□□□□ 0.79
SNX2-205ENST00000506874 TEX11Q8IYF3 940 aa19.97■□□□□ 0.79
SNX2-205ENST00000506874 TMEM57Q8N5G2 664 aa19.97■□□□□ 0.79
SNX2-205ENST00000506874 RNF208Q9H0X6 261 aa19.97■□□□□ 0.79
SNX2-205ENST00000506874 SNRKQ9NRH2 765 aa19.97■□□□□ 0.79
SNX2-205ENST00000506874 H0YGN5 161 aa19.96■□□□□ 0.79
SNX2-205ENST00000506874 TBC1D12O60347 775 aa19.96■□□□□ 0.79
SNX2-205ENST00000506874 NPM3O75607 178 aaKnown RBP19.96■□□□□ 0.79
SNX2-205ENST00000506874 UQCRFS1P1P0C7P4 283 aa19.96■□□□□ 0.79
SNX2-205ENST00000506874 OS9Q13438 667 aaPredicted RBP19.96■□□□□ 0.79
SNX2-205ENST00000506874 TREML2Q5T2D2 321 aa19.96■□□□□ 0.79
SNX2-205ENST00000506874 OSBPL5Q9H0X9 879 aaPredicted RBP19.96■□□□□ 0.79
SNX2-205ENST00000506874 COLQQ9Y215 455 aaPredicted RBP19.96■□□□□ 0.79
SNX2-205ENST00000506874 SLC45A1Q9Y2W3 748 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms