RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 TRAF5O00463 557 aa10.65□□□□□ -0.7
SCAMP1-202ENST00000506858 CHMLP26374 656 aa10.65□□□□□ -0.7
SCAMP1-202ENST00000506858 UBE3CQ15386 1083 aa10.65□□□□□ -0.7
SCAMP1-202ENST00000506858 BMP2KLQ5H9B9 411 aa10.65□□□□□ -0.7
SCAMP1-202ENST00000506858 ZMYM1Q5SVZ6 1142 aa10.65□□□□□ -0.7
SCAMP1-202ENST00000506858 VPS53Q5VIR6 699 aa10.65□□□□□ -0.7
SCAMP1-202ENST00000506858 ASTLQ6HA08 431 aaPredicted RBP10.65□□□□□ -0.7
SCAMP1-202ENST00000506858 USP50Q70EL3 339 aaPredicted RBP10.65□□□□□ -0.7
SCAMP1-202ENST00000506858 ZNF589Q86UQ0 364 aaPredicted RBP10.65□□□□□ -0.7
SCAMP1-202ENST00000506858 MAPKAPK5Q8IW41 473 aa10.65□□□□□ -0.7
SCAMP1-202ENST00000506858 TEX11Q8IYF3 940 aa10.65□□□□□ -0.7
SCAMP1-202ENST00000506858 MTMR14Q8NCE2 650 aa10.65□□□□□ -0.7
SCAMP1-202ENST00000506858 TGFBRAP1Q8WUH2 860 aa10.65□□□□□ -0.7
SCAMP1-202ENST00000506858 SDR42E1Q8WUS8 393 aa10.65□□□□□ -0.7
SCAMP1-202ENST00000506858 SLC39A7Q92504 469 aa10.65□□□□□ -0.7
SCAMP1-202ENST00000506858 OTUD5Q96G74 571 aa10.65□□□□□ -0.7
SCAMP1-202ENST00000506858 MRIQ9BWK5 157 aa10.65□□□□□ -0.7
SCAMP1-202ENST00000506858 SAP30BPQ9UHR5 308 aaKnown RBP10.65□□□□□ -0.7
SCAMP1-202ENST00000506858 POLR2AP24928 1970 aaKnown RBP10.64□□□□□ -0.71
SCAMP1-202ENST00000506858 WDHD1O75717 1129 aaPredicted RBP10.64□□□□□ -0.71
SCAMP1-202ENST00000506858 ZSCAN25Q6NSZ9 544 aa10.64□□□□□ -0.71
SCAMP1-202ENST00000506858 SLF2Q8IX21 1173 aa10.64□□□□□ -0.71
SCAMP1-202ENST00000506858 APPBP2Q92624 585 aa10.64□□□□□ -0.71
SCAMP1-202ENST00000506858 DIAPH3Q9NSV4 1193 aa10.64□□□□□ -0.71
SCAMP1-202ENST00000506858 FAM198AQ9UFP1 575 aa10.64□□□□□ -0.71
SCAMP1-202ENST00000506858 FZD1Q9UP38 647 aa10.64□□□□□ -0.71
SCAMP1-202ENST00000506858 GPAA1O43292 621 aa10.63□□□□□ -0.71
SCAMP1-202ENST00000506858 PPP4CP60510 307 aa10.63□□□□□ -0.71
SCAMP1-202ENST00000506858 AIDAQ96BJ3 306 aa10.63□□□□□ -0.71
SCAMP1-202ENST00000506858 STRBPQ96SI9 672 aaKnown RBP10.63□□□□□ -0.71
SCAMP1-202ENST00000506858 NOL10Q9BSC4 688 aaKnown RBP10.63□□□□□ -0.71
SCAMP1-202ENST00000506858 TMEM39BQ9GZU3 492 aa10.63□□□□□ -0.71
SCAMP1-202ENST00000506858 DOCK2Q92608 1830 aa10.63□□□□□ -0.71
SCAMP1-202ENST00000506858 CYP2D7A0A087X1C5 515 aa10.62□□□□□ -0.71
SCAMP1-202ENST00000506858 BAG3O95817 575 aa10.62□□□□□ -0.71
SCAMP1-202ENST00000506858 ZFYP08048 801 aaPredicted RBP10.62□□□□□ -0.71
SCAMP1-202ENST00000506858 CYP2D6P10635 497 aa10.62□□□□□ -0.71
SCAMP1-202ENST00000506858 C7P10643 843 aa10.62□□□□□ -0.71
SCAMP1-202ENST00000506858 RASA3Q14644 834 aa10.62□□□□□ -0.71
SCAMP1-202ENST00000506858 SH3BP5LQ7L8J4 393 aa10.62□□□□□ -0.71
SCAMP1-202ENST00000506858 KRT26Q7Z3Y9 468 aa10.62□□□□□ -0.71
SCAMP1-202ENST00000506858 PNMA8AQ86V59 439 aaPredicted RBP10.62□□□□□ -0.71
SCAMP1-202ENST00000506858 STK11IPQ8N1F8 1099 aa10.62□□□□□ -0.71
SCAMP1-202ENST00000506858 DEFB129Q9H1M3 183 aa10.62□□□□□ -0.71
SCAMP1-202ENST00000506858 SLC4A4Q9Y6R1 1079 aa10.62□□□□□ -0.71
SCAMP1-202ENST00000506858 CNTNAP1P78357 1384 aa10.62□□□□□ -0.71
SCAMP1-202ENST00000506858 FOXP2O15409 715 aa10.62□□□□□ -0.71
SCAMP1-202ENST00000506858 MYO1BO43795 1136 aa10.62□□□□□ -0.71
SCAMP1-202ENST00000506858 USP5P45974 858 aa10.62□□□□□ -0.71
SCAMP1-202ENST00000506858 PRKG1Q13976 671 aa10.62□□□□□ -0.71
SCAMP1-202ENST00000506858 MCMDC2Q4G0Z9 681 aa10.62□□□□□ -0.71
SCAMP1-202ENST00000506858 LDHDQ86WU2 507 aa10.62□□□□□ -0.71
SCAMP1-202ENST00000506858 DCPSQ96C86 337 aaKnown RBP10.62□□□□□ -0.71
SCAMP1-202ENST00000506858 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.62□□□□□ -0.71
SCAMP1-202ENST00000506858 PGAP2Q9UHJ9 254 aa10.62□□□□□ -0.71
SCAMP1-202ENST00000506858 SCN4AP35499 1836 aa10.61□□□□□ -0.71
SCAMP1-202ENST00000506858 DDTLA6NHG4 134 aaPredicted RBP10.61□□□□□ -0.71
SCAMP1-202ENST00000506858 FAM196BA6NMK8 535 aa10.61□□□□□ -0.71
SCAMP1-202ENST00000506858 APPP05067 770 aa10.61□□□□□ -0.71
SCAMP1-202ENST00000506858 PTH1RQ03431 593 aa10.61□□□□□ -0.71
SCAMP1-202ENST00000506858 NBPF12Q5TAG4 269 aaPredicted RBP10.61□□□□□ -0.71
SCAMP1-202ENST00000506858 ZSCAN29Q8IWY8 852 aaPredicted RBP10.61□□□□□ -0.71
SCAMP1-202ENST00000506858 ZNF408Q9H9D4 720 aa10.61□□□□□ -0.71
SCAMP1-202ENST00000506858 EPB41L4AQ9HCS5 686 aaPredicted RBP10.61□□□□□ -0.71
SCAMP1-202ENST00000506858 HELLSQ9NRZ9 838 aa10.61□□□□□ -0.71
SCAMP1-202ENST00000506858 PALD1Q9ULE6 856 aa10.61□□□□□ -0.71
SCAMP1-202ENST00000506858 MYH7P12883 1935 aa10.6□□□□□ -0.71
SCAMP1-202ENST00000506858 FLT1P17948 1338 aa10.6□□□□□ -0.71
SCAMP1-202ENST00000506858 GSG1L2A8MUP6 293 aa10.6□□□□□ -0.71
SCAMP1-202ENST00000506858 ATMINO43313 823 aaPredicted RBP10.6□□□□□ -0.71
SCAMP1-202ENST00000506858 CDC45O75419 566 aa10.6□□□□□ -0.71
SCAMP1-202ENST00000506858 LRRFIP1Q32MZ4 808 aaKnown RBP10.6□□□□□ -0.71
SCAMP1-202ENST00000506858 MOB2Q70IA6 237 aa10.6□□□□□ -0.71
SCAMP1-202ENST00000506858 MIGA2Q7L4E1 593 aa10.6□□□□□ -0.71
SCAMP1-202ENST00000506858 ZNF467Q7Z7K2 595 aaPredicted RBP10.6□□□□□ -0.71
SCAMP1-202ENST00000506858 SULF1Q8IWU6 871 aa10.6□□□□□ -0.71
SCAMP1-202ENST00000506858 TEPSINQ96N21 525 aa10.6□□□□□ -0.71
SCAMP1-202ENST00000506858 ESYT1Q9BSJ8 1104 aa10.6□□□□□ -0.71
SCAMP1-202ENST00000506858 CRNKL1Q9BZJ0 848 aaKnown RBP10.6□□□□□ -0.71
SCAMP1-202ENST00000506858 TMOD2Q9NZR1 351 aa10.6□□□□□ -0.71
SCAMP1-202ENST00000506858 ITGBL1O95965 494 aaPredicted RBP10.59□□□□□ -0.71
SCAMP1-202ENST00000506858 MMP14P50281 582 aa10.59□□□□□ -0.71
SCAMP1-202ENST00000506858 PLCD1P51178 756 aa10.59□□□□□ -0.71
SCAMP1-202ENST00000506858 IFNLR1Q8IU57 520 aaPredicted RBP10.59□□□□□ -0.71
SCAMP1-202ENST00000506858 ZC3H15Q8WU90 426 aaKnown RBP10.59□□□□□ -0.71
SCAMP1-202ENST00000506858 CDCA5Q96FF9 252 aa10.59□□□□□ -0.71
SCAMP1-202ENST00000506858 IDI2Q9BXS1 227 aa10.59□□□□□ -0.71
SCAMP1-202ENST00000506858 DCP1AQ9NPI6 582 aaPredicted RBP10.59□□□□□ -0.71
SCAMP1-202ENST00000506858 INCENPQ9NQS7 918 aa10.59□□□□□ -0.71
SCAMP1-202ENST00000506858 AK9Q5TCS8 1911 aa10.59□□□□□ -0.71
SCAMP1-202ENST00000506858 CCDC171Q6TFL3 1326 aa10.59□□□□□ -0.71
SCAMP1-202ENST00000506858 MINDY4BA8MYZ0 360 aa10.58□□□□□ -0.72
SCAMP1-202ENST00000506858 USP17L12C9JPN9 530 aa10.58□□□□□ -0.72
SCAMP1-202ENST00000506858 USP17L21D6R901 530 aa10.58□□□□□ -0.72
SCAMP1-202ENST00000506858 SGSM2O43147 1006 aa10.58□□□□□ -0.72
SCAMP1-202ENST00000506858 SEC24BO95487 1268 aa10.58□□□□□ -0.72
SCAMP1-202ENST00000506858 HSPD1P10809 573 aaKnown RBP10.58□□□□□ -0.72
SCAMP1-202ENST00000506858 PLCG2P16885 1265 aa10.58□□□□□ -0.72
SCAMP1-202ENST00000506858 CDC37L1Q7L3B6 337 aa10.58□□□□□ -0.72
SCAMP1-202ENST00000506858 APOBEC3FQ8IUX4 373 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms